*'''Brandon (Coder and Project Manager):''' This week, I focused on creating and customizing the species profile for ''Bordetella pertussis'' in GenMAPP Builder, the details of which can be found in my [[Bklein7 Week 14| Week 14 Journal Entry]]. I documented the first export I conducted using a custom ''Bordetella pertussis'' species profile here: [[Gene Database Testing Report- cw20151201]]. I demonstrated that the custom species information implemented in this export worked as intended, but Mahrad and I identified 11 ORF genes that failed to export. I updated the ''Bordetella pertussis'' species profile to account for these ORF genes and conducted a new export, detailed here: [[Gene Database Testing Report- cw20151203]]. Mahrad analyzed the exported .gdb file. In addition to this, I kept tabs on my fellow group members to keep us on track to accomplish our long-term project goals in a timely manner.
 
*'''Brandon (Coder and Project Manager):''' This week, I focused on creating and customizing the species profile for ''Bordetella pertussis'' in GenMAPP Builder, the details of which can be found in my [[Bklein7 Week 14| Week 14 Journal Entry]]. I documented the first export I conducted using a custom ''Bordetella pertussis'' species profile here: [[Gene Database Testing Report- cw20151201]]. I demonstrated that the custom species information implemented in this export worked as intended, but Mahrad and I identified 11 ORF genes that failed to export. I updated the ''Bordetella pertussis'' species profile to account for these ORF genes and conducted a new export, detailed here: [[Gene Database Testing Report- cw20151203]]. Mahrad analyzed the exported .gdb file. In addition to this, I kept tabs on my fellow group members to keep us on track to accomplish our long-term project goals in a timely manner.
 
** [[User:Bklein7|Bklein7]] ([[User talk:Bklein7|talk]]) 13:39, 7 December 2015 (PST)
 
** [[User:Bklein7|Bklein7]] ([[User talk:Bklein7|talk]]) 13:39, 7 December 2015 (PST)
Exception encountered, of type "Error"
[727e0410] /biodb/fall2015/index.php?diff=prev&oldid=7469&title=The_Class_Whoopers Error from line 434 of /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php: Call to undefined function each()
Backtrace:
#0 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(544): DiffEngine->diag()
#1 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(344): DiffEngine->compareSeq()
#2 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(227): DiffEngine->diffLocal()
#3 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(721): DiffEngine->diff()
#4 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(859): Diff->__construct()
#5 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(980): MappedDiff->__construct()
#6 /apps/xmlpipedb/biodb/fall2015/includes/diff/TableDiffFormatter.php(194): WordLevelDiff->__construct()
#7 /apps/xmlpipedb/biodb/fall2015/includes/diff/DiffFormatter.php(140): TableDiffFormatter->changed()
#8 /apps/xmlpipedb/biodb/fall2015/includes/diff/DiffFormatter.php(82): DiffFormatter->block()
#9 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(888): DiffFormatter->format()
#10 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(802): DifferenceEngine->generateTextDiffBody()
#11 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(733): DifferenceEngine->generateContentDiffBody()
#12 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(662): DifferenceEngine->getDiffBody()
#13 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(632): DifferenceEngine->getDiff()
#14 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(453): DifferenceEngine->showDiff()
#15 /apps/xmlpipedb/biodb/fall2015/includes/page/Article.php(795): DifferenceEngine->showDiffPage()
#16 /apps/xmlpipedb/biodb/fall2015/includes/page/Article.php(506): Article->showDiffPage()
#17 /apps/xmlpipedb/biodb/fall2015/includes/actions/ViewAction.php(44): Article->view()
#18 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(395): ViewAction->show()
#19 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(273): MediaWiki->performAction()
#20 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(566): MediaWiki->performRequest()
#21 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(414): MediaWiki->main()
#22 /apps/xmlpipedb/biodb/fall2015/index.php(44): MediaWiki->run()
#23 {main}