Difference between revisions of "Bordetella Pertussis GenMAPP Analysis Deliverables"
From LMU BioDB 2015
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* GenMAPP Gene Database for assigned species (''.gdb''): [[File:Bpertussis-std cw20151210.zip]] | * GenMAPP Gene Database for assigned species (''.gdb''): [[File:Bpertussis-std cw20151210.zip]] | ||
* ReadMe file to accompany the Gene Database (''.pdf'') | * ReadMe file to accompany the Gene Database (''.pdf'') | ||
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** Include Gene Database Schema diagram in ReadMe | ** Include Gene Database Schema diagram in ReadMe | ||
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* Gene Database Testing Report for final submitted Gene Database (print from wiki to ''.pdf'' file) | * Gene Database Testing Report for final submitted Gene Database (print from wiki to ''.pdf'' file) | ||
* Processed and analyzed DNA microarray dataset (''.xls'' or ''.xlsx''): [[File:Bpertussis compiledrawdata cw20151208.xlsx]] | * Processed and analyzed DNA microarray dataset (''.xls'' or ''.xlsx''): [[File:Bpertussis compiledrawdata cw20151208.xlsx]] | ||
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** [[File:Bpertussis mappfinderresults cw20151213-criterion1-GO.txt]] | ** [[File:Bpertussis mappfinderresults cw20151213-criterion1-GO.txt]] | ||
* ''.gmf'' file: [[File:Bpertussis compiledrawdata cw20151213.gmf]] | * ''.gmf'' file: [[File:Bpertussis compiledrawdata cw20151213.gmf]] | ||
| − | * Filtered MAPPFinder Results (''.xls'' or ''.xlsx''): | + | * Filtered MAPPFinder Results (''.xls'' or ''.xlsx''): |
| + | ** [[File:Bpertussis mappfinderresults filtered cw20151213-Criterion0-GO.xlsx]] | ||
** [[File:Bpertussis mappfinderresults filtered cw20151213-Criterion1-GO.xlsx]] | ** [[File:Bpertussis mappfinderresults filtered cw20151213-Criterion1-GO.xlsx]] | ||
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* Sample MAPP file of a relevant biological pathway for your species (''.mapp''): [[File:Bpertussis ribosomepathway cw20151215.mapp]] | * Sample MAPP file of a relevant biological pathway for your species (''.mapp''): [[File:Bpertussis ribosomepathway cw20151215.mapp]] | ||
* [[Gene Database Project Deliverables#Group Report | Group Report]] describing the creation of the Gene Database and the biological analysis of the data (''.doc'', ''.docx'', or ''.pdf'') | * [[Gene Database Project Deliverables#Group Report | Group Report]] describing the creation of the Gene Database and the biological analysis of the data (''.doc'', ''.docx'', or ''.pdf'') | ||
* PowerPoint presentation: [[File:Bpertussis findings powerpoint.pdf]] | * PowerPoint presentation: [[File:Bpertussis findings powerpoint.pdf]] | ||
Revision as of 06:52, 18 December 2015
Group Files and Datasets
- GenMAPP Gene Database for assigned species (.gdb): File:Bpertussis-std cw20151210.zip
- ReadMe file to accompany the Gene Database (.pdf)
- Include Gene Database Schema diagram in ReadMe
- Gene Database Testing Report for final submitted Gene Database (print from wiki to .pdf file)
- Processed and analyzed DNA microarray dataset (.xls or .xlsx): File:Bpertussis compiledrawdata cw20151208.xlsx
- Data file used for import into GenMAPP (.txt or .csv): File:Bpertussis compiledrawdata cw20151208.txt
- GenMAPP Expression Dataset file (.gex): File:Bpertussis expressiondataset cw20151213.gex
- Exceptions file of data imported into GenMAPP (.EX.txt): File:Bpertussis expressiondataset exceptions cw20151213.EX.txt
- Raw MAPPFinder results files (-GO.txt):
- .gmf file: File:Bpertussis compiledrawdata cw20151213.gmf
- Filtered MAPPFinder Results (.xls or .xlsx):
- Sample MAPP file of a relevant biological pathway for your species (.mapp): File:Bpertussis ribosomepathway cw20151215.mapp
- Group Report describing the creation of the Gene Database and the biological analysis of the data (.doc, .docx, or .pdf)
- PowerPoint presentation: File:Bpertussis findings powerpoint.pdf
