Eyanosch Week 10

Website to genome sequence papers

http://iai.asm.org/content/69/5/3271.short

http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0033240 Check out who cited the paper and what articles the paper cited from

http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-32978/?keywords=Shigella+flexneri&organism=Shigella+flexneri&exptype[]=%22rna+assay%22&exptype[]=%22array+assay%22&array=

• Look under files, and use sample and data relationship, raw data, processed data, array design. ETC

Microarray : http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE12535

Individual Journal Assignment

• Store this journal entry as "username Week 10" (i.e., this is the text to place between the square brackets when you link to this page).
• Link from your user page to this Assignment page.
• Link to your journal entry from your user page.
• Link back from your journal entry to your user page.
• Don't forget to add the "Journal Entry" category to the end of your wiki page.
  • Note: you can easily fulfill all of these links by adding them to your template and then using your template on your journal entry.
• For your assignment this week, you will keep an electronic laboratory notebook on your individual journal entry page for this week. An electronic laboratory notebook records all the manipulations you perform on the data and the answers to the questions throughout the protocol. Like a paper lab notebook found in a wet lab, it should contain enough information so that you or someone else could reproduce what you did using only the information from the notebook.

Note that each person will complete an individual annotated bibliography. Information from each team member's bibliography will then be compiled on your team's page. This will require coordination among the team members so that both the individual and team assignment will be completed by the journal deadline.