GÉNialOMICS Week 10

Genome Paper Annotated Bibliography

The Genome of Burkholderia cenocepacia J2315, an Epidemic Pathogen of Cystic Fibrosis Patients

• 1. • • The complete bibliographic reference in the APA style (see the Writing LibGuide) You will be using one of three formats, “journal article from database (with DOI), journal article from database (no DOI) or journal article in print (no DOI).)

Holden, M. T. G., Seth-Smith, H. M. B., Crossman, L. C., Sebaihia, M., Bentley, S. D., Cerdeño-Tárraga, A. M., … Parkhill, J. (2009). The Genome of Burkholderia cenocepacia J2315, an Epidemic Pathogen of Cystic Fibrosis Patients . Journal of Bacteriology, 191(1), 261–277. http://doi.org/10.1128/JB.01230-08

• 1. • • The link to the abstract from PubMed. [1]
       • The link to the full text of the article in PubMedCentral. [2]
       • The link to the full text of the article (HTML format) from the publisher web site. [3]
       • The link to the full PDF version of the article from the publisher web site. [4]
       • Who owns the rights to the article? American Society for Microbiology
         • Does the journal own the copyright? Yes
         • Do the authors own the copyright? No
         • Do the authors own the rights under a Creative Commons license? No
         • Is the article available “Open Access”? Yes
       • What organization is the publisher of the article? What type of organization is it? (commercial, for-profit publisher, scientific society, respected open access organization like Public Library of Science or BioMedCentral, or predatory open access organization, see the list of) (Open Access Scholarly Publishers Association Members) here. American Society for Microbiology which is a scientific society
       • Is this article available in print or online only? It is both available in print and online.
       • Has LMU paid a subscription or other fee for your access to this article? Well I first looked at this article through web of science which LMU does pay for but looking at the article through PubMed, PubMed central and the publisher website was free.
       • How many articles does this article cite? It has 150 cited references.
       • How many articles cite this article? It is cited 128 times.
       • Based on the titles and abstracts of the papers, what type of research directions have been taken now that the genome for that organism has been sequenced? A lot of the papers revolved around antibiotic resistance and therapeutic strategies.