https://xmlpipedb.lmucs.io/biodb/fall2017/api.php?action=feedcontributions&feedformat=atom&user=Nicolekalcic
LMU BioDB 2017 - User contributions [en]
2026-06-15T16:18:22Z
User contributions
MediaWiki 1.29.0
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=User:Nicolekalcic&diff=5905
User:Nicolekalcic
2020-01-25T22:22:35Z
<p>Nicolekalcic: /* Nicole Kalcic */</p>
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<div><br />
== Nicole Kalcic ==<br />
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=== '''Education''' ===<br />
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* Major: Studio Arts (Painting and Drawing Concentration)<br />
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* Expected to graduate: May of 2019<br />
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* Upper division courses in biology, chemistry, math, or computer programming: BIOL/CMSI 367-01<br />
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=== '''Journals''' ===<br />
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[[Template:Nicolekalcic|My Template]]<br />
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{{Template:Nicolekalcic}}<br />
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=== '''Acknowledgements''' ===<br />
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* I did not work with a homework partner on the Week 1 Assignment.<br />
* I referenced ([https://en.wikipedia.org/wiki/Help:Category Help:Category ]) to clarify the use of categories. <br />
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While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
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[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 23:40, 6 September 2017 (PDT)<br />
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=== '''References''' ===<br />
* LMU BioDB 2017. (2017). Week 1. Retrieved August 29, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_1<br />
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<!-- Nicolekalcic --><br />
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[[Category:Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_15&diff=5837
Nicolekalcic Week 15
2017-12-15T22:09:21Z
<p>Nicolekalcic: added electronic journal</p>
<hr />
<div>==Electronic Journal==<br />
This week I formatted the presentation, I finished my part of the Group Paper, I made a logo for GRNSight using Adobe Illustrator (Scalable Vector Graphic), and I kept in contact with my group in order to complete our deliverables on time.<br />
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== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:09, 15 December 2017 (PST)<br />
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== References ==<br />
* LMU BioDB 2017. (2017). Week 15. Retrieved December 5th, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_15<br />
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==Links==<br />
{{Template:Nicolekalcic}}<br />
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[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=5807
Page Desiigner
2017-12-15T18:34:01Z
<p>Nicolekalcic: wrong formatting /* Nicole */</p>
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<div>[[Category:Page Desiigner]]<br />
[[Category:Group Projects]]<br />
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==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
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Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
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Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
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Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
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==Page Desiigner Deliverables Page==<br />
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[[Page Desiigner Deliverables Page]]<br />
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==Team Schedule==<br />
[[Page Desiigner Schedule]]<br />
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==Page Desiigner Uploaded Files==<br />
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[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
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[[File:Data Driven Design.zip]]<br />
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[[File:Pagedesignprototype.zip]]<br />
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[[File:BiodbPageDesignFinalPresentation_.pptx]] <br />
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==Page Layout==<br />
*<code>Below are a series of rough ideas we will use to create the layout of the page</code><br />
[[File:ACT1screenshot.png|500px]]<br />
*We will be using a layout similar to the ACT1 gene page.<br />
[[File:Sketchofpagedesign.png]]<br />
*This is a rough sketch of what the page will look like.<br />
*The section labeled '''description''' on the sketch will include the following:<br />
**Gene ID from each database<br />
**Description/Function (ensembl)<br />
*Within the dropdown menus we will be incorporating the following:<br />
**DNA Sequence (ensembl)<br />
**Protein Sequence (UniProt)<br />
**Locus tag (NCBI)<br />
**Also Known As (NCBI)<br />
**Consensus Sequence (JASPAR)<br />
**Regulation (SGD)<br />
**Interaction (SGD)<br />
**Similar Proteins (UniProt)<br />
**Gene Ontology (SGD)<br />
**JASPAR<br />
***Matrix ID <br />
***Class Heat shock factors<br />
***Family HSF factors<br />
***Sequence Logo <br />
***Frequency Matrix<br />
*A zip file containing the html file of prototype page can be downloaded by clicking the <code>pagedesignprototype.zip</code> link below.<br />
[[File:Pagedesignprototype.zip]]<br />
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==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*Publisher: American Society for Microbiology. This is a scientific society.<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
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Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*Publisher: Elsevier. This is a for-profit publisher<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
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===Hayden's Contribution===<br />
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Dahlquist, K. D., Fitzpatrick, B. G., Camacho, E. T., Entzminger, S. D., & Wanner, N. C. (2015). Parameter Estimation for Gene Regulatory Networks from Microarray Data: Cold Shock Response in Saccharomyces cerevisiae. Bulletin of Mathematical Biology, 77(8), 1457–1492. http://doi.org/10.1007/s11538-015-0092-6<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/26420504<br />
* PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/<br />
* Publisher Full Text (HTML): https://link.springer.com/article/10.1007/s11538-015-0092-6<br />
* Publisher Full Text (PDF): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/pdf/11538_2015_Article_92.pdf<br />
* Copyright: The Author(s) 2015. Open Access: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.<br />
* Publisher: Bulletin of Mathematical Biology(scientific society)<br />
* Availability: Online<br />
* Did LMU pay a fee for this article: No<br />
* Data: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/bin/11538_2015_92_MOESM1_ESM.zip<br />
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Ando, A., Nakamura, T., Murata, Y., Takagi, H. and Shima, J. (2007), Identification and classification of genes required for tolerance to freeze–thaw stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains. FEMS Yeast Research, 7: 244–253. doi:10.1111/j.1567-1364.2006.00162.x<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/16989656<br />
* PubMed Central: N/A<br />
* Publisher Full Text (HTML): https://academic.oup.com/femsyr/article/7/2/244/616825?searchresult=1<br />
* Publisher Full Text (PDF): http://onlinelibrary.wiley.com/doi/10.1111/j.1567-1364.2006.00162.x/epdf<br />
* Copyright: Copyright © 2007, Oxford University Press; Open Access after time has elapsed: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. You must ask permission from the publisher to use the article.<br />
* Publisher: Published by Oxford University Press(respected open access organization)<br />
* Availability: Online and in print<br />
* Did LMU pay a fee for this article: No<br />
* Data: I couldn't find any supplementary data other than the data provided in the article.<br />
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==Journal Club Presentations==<br />
===Powerpoint Slides and Respective Articles===<br />
[[File:Data Driven Design.zip]]<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
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[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
*Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
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==Executive Summaries==<br />
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===[[Week 11]] Executive Summaries===<br />
====Arash====<br />
This week, I worked on researching the given article and the development terms within it as well as prepare a presentation on the article. I also began thinking of some page layout ideas with Nicole to prepare to implement in the coming weeks. All of this information could be found on my Week 11 page: [[ArashLari_Week_11|ArashLari Week 11]].<br />
[[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 02:09, 14 November 2017 (PST)<br />
====Mary====<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
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[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 23:03, 13 November 2017 (PST)<br />
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====Nicole====<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The presentation gives an overview of our individual journals and what we each learned. You can access more information on what I did this week here: [[Nicolekalcic Week 11]].<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 01:27, 14 November 2017 (PST)<br />
====Hayden====<br />
This week I created part of the annotated bibliography we will be using for our final project. I conducted searched for "yeast cold shock microarray" articles and found which two articles I was going to use for the bibliography. The majority of the time this week was spent on finding the information needed for the annotated bibliography which can be found below on this page. More detailed information can be found on my [[hhinsch Week 11]] page. This week I became proficient in finding reliable article to use for our final project. This week we also created the group's template and wiki page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:43, 13 November 2017 (PST)<br />
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===[[Week 12]] Executive Summaries===<br />
====Arash====<br />
This week was rather light compared to the previous week. We mostly set up the files on our personal computers, which was convenient because as a computer science major I already had most of the necessary files. Nicole and I talked about some preliminary designs and set up a rough schedule that we'll make concrete after the break. This can be found on my week 12 page [[ArashLari Week 12] | Arash Lari Week 12]. [[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 20:43, 20 November 2017 (PST)<br />
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====Mary====<br />
This week I read an article about an experiment done on wine and lab strains of yeast in different temperatures. The experimenters used DNA microarrays to determine which genes were affected by the change in temperatures and which were different based on the different strains of yeast. While reading the article, I can across words I had never seen before, so I also found and recorded the definitions of these words. I then made an outline of the article, to use as a basis for my presentation with our project manager, [[user:hhinsch| Hayden]]. All of this is on my [[mbalducc Week 12| Week 12]] page.<br />
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[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 19:51, 19 November 2017 (PST)<br />
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====Nicole====<br />
Because Arash and I presented last week, we didn't have a heavy work load this week. Arash explained a lot of technical things to me, and we completed the first coding milestones and talked about design possibilities. I officially have a GitHub (nicolekal). I also downloaded the software I needed but didn't have onto my laptop. A full update can be found on: [[Nicolekalcic Week 12] | Nicole Kalcic Week 12]. [[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 23:45, 20 November 2017 (PST)<br />
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====Hayden====<br />
This week I worked with Mary specifically in order to complete our journal club presentation. As a group we worked together to make corrections to the [[Page Desiigner]] group page in order to complete the deliverables for this week. Mary and I created a schedule for our group along with helpful links. As a class we decided we will be using WhatsApp to communicate. I spent most of this week outlining the article (it was a pretty difficult read) and defining terms on my [[hhinsch Week 12]] page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 17:42, 20 November 2017 (PST)<br />
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===[[Week 14]] Executive Summaries===<br />
====Arash====<br />
This week I worked on implementing our designs for the web page. Nicole and Hayden helped come up with some design ideas. We ended up deciding that ACT1 was a very well designed page and that it would be best to follow the format of that page. There's only a few things left to do but our portion of the project is nearly complete, the generic version of every gene's page needs just a few finishing touches. [[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 18:19, 4 December 2017 (PST)<br />
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====Mary====<br />
This week I finished the Week 10 assignment, using YEASTRACT and GRNsight. I specifically chose one profile from the STEM results to use in YEASTRACT to find transcription factors that regulate a cluster of genes. First I uploaded the genes from profile #22 into YEASTRACT to find 20 significant transcription factors that regulate them. Then, I used Excel to get rid of the transcription factors that were not related to other transcription factors. Once I had those, I imported them into GRNsight to create a map of the transcription factors and their relations to each other. I took a screenshot of this map and uploaded it to my [[mbalducc Week 14| Week 14]] page.<br />
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[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 19:14, 4 December 2017 (PST)<br />
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====Nicole====<br />
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====Hayden====<br />
This week I served as a "floater". I worked with Nicole and Arash in order to come up with how the page design prototype would look. We decided to use the ACT1 design along with Nicole's sketch in order to find a balance between aesthetic and function. The design we used is downloadable from this page and my [[hhinsch Week 14]] page. My [[hhinsch Week 14]] page has some more information regarding why we chose our current prototype design. I also spoke with Mary to make sure she knew I was there to help with her deliverables if needed. I also spent time with the other QA's this week in order to familiarize myself with the deliverables of the other groups. This was necessary for me to make sure we added everything to the page that is required. I uploaded images to my [hhinsch Week 14]] page as well as this page in order to further clarify our thought process behind the page prototype. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 20:16, 4 December 2017 (PST)<br />
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==Team Progress Reflections==<br />
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===[[Week 11]] Team Progress Reflections===<br />
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====Nicole====<br />
# What worked?<br />
#* We all work well in our positions. Arash and I worked together recently, so it was easy to coordinate what we are going to do as coder and designer. Everyone was open to opinions on the page and team name. Also, everyone communicated what they were having trouble finishing. <br />
# What didn't work?<br />
#* Like Mary said, we weren't able to meet in person. We planned out our meetup during class, but Friday ended up being a busy day for everyone. <br />
# What will I do next to fix what didn't work?<br />
#* Next week I will make sure to check in more with my partners. Even if we don't meet up, it is important to make sure everyone is caught up on the assignment and their individual parts. <br />
====Mary====<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
====Hayden====<br />
# What worked?<br />
#*We are all doing well communicating and completing our deliverables as individuals and as a group.<br />
# What didn't work?<br />
#*Everything worked well in regards to the group, but I did have some trouble finding all the information needed to create an annotated bibliography for the articles I used. Google Scholar gave me way too many results, and PubMed did not have a lot of articles that were either free or LMU had paid for.<br />
# What will I do next to fix what didn't work?<br />
#*I will continue to ask questions in class. I also feel more confident about finding useful articles after the completion of this assignment, so it shouldn't be a problem.<br />
[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:44, 13 November 2017 (PST)<br />
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====Arash====<br />
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# What worked?<br />
#*We were good at maintaining our own individual tasks and keeping each other updated via text message.<br />
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# What didn't work?<br />
#*We were unable to schedule time to meet and work effectively. <br />
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# What will I do next to fix what didn't work?<br />
#*Hopefully we will have lighter course loads and more free time for the next assignment, but besides that we will begin working sooner and try to work in person more than digitally.<br />
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===[[Week 12]] Team Progress Reflections===<br />
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====Arash====<br />
# What worked?<br />
#*I think we all got a better grasp of the assignment and time management for the assignment. We have a clear idea where we're headed.<br />
# What didn't work?<br />
#* I wish we had more time to dedicate to this class, as often our schedules don't line up. <br />
# What will I do next to fix what didn't work?<br />
#*We'll try to be more proactive about all our tasks so they don't pile up. I'm planning on starting some work during the thanksgiving break to lighten the load afterwards.<br />
====Mary====<br />
# What worked?<br />
#*I think that this week I felt more comfortable with the project as a whole. I also liked presenting after the other guilds because I got to see their presentations to get a better idea of what we should include in ours.<br />
# What didn't work?<br />
#*I wish that I had more time to read the article and make the presentation. I felt that I didn't understand the article completely, and had to read it a few times to be happy with the way that I understood it and formed my outline of it. Because of this, I couldn't spend as much time as I would've wanted on making the presentation.<br />
# What will I do next to fix what didn't work?<br />
#*I will try to spend more time on the entire project, instead of just one part.<br />
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====Nicole====<br />
#What Worked?<br />
#*Arash and I communicated via text and had a better idea of what we needed to do earlier on in the week, which made it easier to progress and do quality, time efficient work. <br />
#What didn't work?<br />
#*We weren't all able to meet in person. I don't know if this was a huge issue this week, but scheduling conflicts might become more of a problem in December. <br />
#What will I do next week to fix what didn't work?<br />
#*Next week I will try to make plans with the group on Tuesday. I am assuming everyone is going out of town for Thanksgiving, but perhaps we can make certain dates within the week to have things done by so the rest of the group can look over the work.<br />
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====Hayden====<br />
#What Worked?<br />
#*This week we were a little more prepared to work together and complete the deliverables. As time goes by the end goal is becoming more apparent.<br />
#What didn't work?<br />
#*I spent a lot of time reading the article multiple times and it is still a bit confusing to me. A lot of the vocabulary wasn't even found in the dictionaries we provided and a lot of the information needed a lot of background knowledge to comprehend.<br />
#What will I do next week to fix what didn't work?<br />
#*Next week I will try and do the bulk of the assignment earlier in the week rather than on the weekend, so I may have more time to understand the material.[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 21:09, 20 November 2017 (PST)<br />
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===[[Week 14]] Team Progress Reflections===<br />
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====Arash====<br />
# What worked?<br />
#* Our design idea turned out pretty nicely, and was not that difficult to implement.<br />
# What didn't work?<br />
#* Coming up with what the final aesthetics will look like.<br />
# What will I do next to fix what didn't work?<br />
#* We will discuss the matter in class with the professors and our fellow students to see what works best for everyone.<br />
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====Mary====<br />
#What worked?<br />
#*Using YEASTRACT, Excel, and GRNsight to create a map of significant transcription factors in the profile I chose.<br />
#What didn't work?<br />
#*I have not fixed Weeks 8 and 10 as much as I would have wanted to.<br />
#What will I do next to fix what didn't work?<br />
#*Take more time, make sure I do things right the first time so I don't have to back and fix them later.<br />
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====Hayden====<br />
# What worked?<br />
#* We did a pretty good job getting everything done we needed to get done this week in a timely fashion while dealing with adversity.<br />
# What didn't work?<br />
#* We still need to complete the prototype and add the other groups' deliverables to our page.<br />
# What will I do next to fix what didn't work?<br />
#* We just simply need to take a final assessment of the deliverables as well as gather feedback from the entire class regarding the final layout of the page.<br />
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====Nicole====<br />
# What worked?<br />
#* We completed the basic structure of the page, and everyone was able to finish their work in time despite my absence on Thursday. <br />
# What didn't work?<br />
#* We haven't finalized anything yet, or implemented any information into the page. <br />
# What will I do next to fix what didn't work?<br />
#* We will talk with everyone in class, including the Dahlquist and Dionisio in order to make final decisions moving into Week 15. <br />
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===[[Week 15]] Team Progress Reflections===<br />
====Arash====<br />
This week I worked on adding the finishing touches to our info.html file in order to make the information easier to digest and nicer to look at. I also worked on my parts of the group presentation and report, which basically entailed me writing out, in detail, everything I did for the GRNsight project. I also wrote an individual statement of work that I emailed to the professors.<br />
[[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 22:44, 14 December 2017 (PST)<br />
[[ArashLari_Week_15|ArashLari Week 15]]<br />
====Hayden====<br />
This week I helped complete the final presentation for our team as well as the final paper. I made sure all of the deliverables were accurately produced as well as formulates the final presentation and final paper layout. In regards to what worked and what didn't work, everything was completed on time and we all communicated fairly effectively so I don't have anything to note on. Our deliverables can be found on my [[Page Desiigner Deliverables Page]] page. A More detailed summary of work can be found on my [[hhinsch Week 15]] page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 06:21, 15 December 2017 (PST)<br />
<br />
====Mary====<br />
====Nicole====<br />
This week, I helped format the presentation. I also completed my part of the group paper. In addition, I created a logo for GRNSight on Adobe Illustrator. Arash wanted a bar for the top of the page that had a small logo on it. This was done as a scalable vector graphic and then emailed to Arash. <br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 10:32, 15 December 2017 (PST)<br />
{{Pagedesiigner}}</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=5806
Page Desiigner
2017-12-15T18:32:51Z
<p>Nicolekalcic: added summary /* Nicole */</p>
<hr />
<div>[[Category:Page Desiigner]]<br />
[[Category:Group Projects]]<br />
<br />
<br />
<br />
==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
<br><br />
Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
<br><br />
Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
<br><br />
Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
<br />
==Page Desiigner Deliverables Page==<br />
<br />
[[Page Desiigner Deliverables Page]]<br />
<br />
==Team Schedule==<br />
[[Page Desiigner Schedule]]<br />
<br />
==Page Desiigner Uploaded Files==<br />
<br />
[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
<br><br />
[[File:Data Driven Design.zip]]<br />
<br><br />
[[File:Pagedesignprototype.zip]]<br />
<br><br />
[[File:BiodbPageDesignFinalPresentation_.pptx]] <br />
<br />
==Page Layout==<br />
*<code>Below are a series of rough ideas we will use to create the layout of the page</code><br />
[[File:ACT1screenshot.png|500px]]<br />
*We will be using a layout similar to the ACT1 gene page.<br />
[[File:Sketchofpagedesign.png]]<br />
*This is a rough sketch of what the page will look like.<br />
*The section labeled '''description''' on the sketch will include the following:<br />
**Gene ID from each database<br />
**Description/Function (ensembl)<br />
*Within the dropdown menus we will be incorporating the following:<br />
**DNA Sequence (ensembl)<br />
**Protein Sequence (UniProt)<br />
**Locus tag (NCBI)<br />
**Also Known As (NCBI)<br />
**Consensus Sequence (JASPAR)<br />
**Regulation (SGD)<br />
**Interaction (SGD)<br />
**Similar Proteins (UniProt)<br />
**Gene Ontology (SGD)<br />
**JASPAR<br />
***Matrix ID <br />
***Class Heat shock factors<br />
***Family HSF factors<br />
***Sequence Logo <br />
***Frequency Matrix<br />
*A zip file containing the html file of prototype page can be downloaded by clicking the <code>pagedesignprototype.zip</code> link below.<br />
[[File:Pagedesignprototype.zip]]<br />
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<br />
<br />
==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*Publisher: American Society for Microbiology. This is a scientific society.<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
<br />
<br />
Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*Publisher: Elsevier. This is a for-profit publisher<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
<br />
===Hayden's Contribution===<br />
<br />
Dahlquist, K. D., Fitzpatrick, B. G., Camacho, E. T., Entzminger, S. D., & Wanner, N. C. (2015). Parameter Estimation for Gene Regulatory Networks from Microarray Data: Cold Shock Response in Saccharomyces cerevisiae. Bulletin of Mathematical Biology, 77(8), 1457–1492. http://doi.org/10.1007/s11538-015-0092-6<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/26420504<br />
* PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/<br />
* Publisher Full Text (HTML): https://link.springer.com/article/10.1007/s11538-015-0092-6<br />
* Publisher Full Text (PDF): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/pdf/11538_2015_Article_92.pdf<br />
* Copyright: The Author(s) 2015. Open Access: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.<br />
* Publisher: Bulletin of Mathematical Biology(scientific society)<br />
* Availability: Online<br />
* Did LMU pay a fee for this article: No<br />
* Data: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/bin/11538_2015_92_MOESM1_ESM.zip<br />
<br />
<br />
Ando, A., Nakamura, T., Murata, Y., Takagi, H. and Shima, J. (2007), Identification and classification of genes required for tolerance to freeze–thaw stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains. FEMS Yeast Research, 7: 244–253. doi:10.1111/j.1567-1364.2006.00162.x<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/16989656<br />
* PubMed Central: N/A<br />
* Publisher Full Text (HTML): https://academic.oup.com/femsyr/article/7/2/244/616825?searchresult=1<br />
* Publisher Full Text (PDF): http://onlinelibrary.wiley.com/doi/10.1111/j.1567-1364.2006.00162.x/epdf<br />
* Copyright: Copyright © 2007, Oxford University Press; Open Access after time has elapsed: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. You must ask permission from the publisher to use the article.<br />
* Publisher: Published by Oxford University Press(respected open access organization)<br />
* Availability: Online and in print<br />
* Did LMU pay a fee for this article: No<br />
* Data: I couldn't find any supplementary data other than the data provided in the article.<br />
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<br />
<br />
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==Journal Club Presentations==<br />
===Powerpoint Slides and Respective Articles===<br />
[[File:Data Driven Design.zip]]<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
<br><br />
[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
*Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
<br />
==Executive Summaries==<br />
<br />
<br />
===[[Week 11]] Executive Summaries===<br />
====Arash====<br />
This week, I worked on researching the given article and the development terms within it as well as prepare a presentation on the article. I also began thinking of some page layout ideas with Nicole to prepare to implement in the coming weeks. All of this information could be found on my Week 11 page: [[ArashLari_Week_11|ArashLari Week 11]].<br />
[[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 02:09, 14 November 2017 (PST)<br />
====Mary====<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 23:03, 13 November 2017 (PST)<br />
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====Nicole====<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The presentation gives an overview of our individual journals and what we each learned. You can access more information on what I did this week here: [[Nicolekalcic Week 11]].<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 01:27, 14 November 2017 (PST)<br />
====Hayden====<br />
This week I created part of the annotated bibliography we will be using for our final project. I conducted searched for "yeast cold shock microarray" articles and found which two articles I was going to use for the bibliography. The majority of the time this week was spent on finding the information needed for the annotated bibliography which can be found below on this page. More detailed information can be found on my [[hhinsch Week 11]] page. This week I became proficient in finding reliable article to use for our final project. This week we also created the group's template and wiki page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:43, 13 November 2017 (PST)<br />
<br />
===[[Week 12]] Executive Summaries===<br />
====Arash====<br />
This week was rather light compared to the previous week. We mostly set up the files on our personal computers, which was convenient because as a computer science major I already had most of the necessary files. Nicole and I talked about some preliminary designs and set up a rough schedule that we'll make concrete after the break. This can be found on my week 12 page [[ArashLari Week 12] | Arash Lari Week 12]. [[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 20:43, 20 November 2017 (PST)<br />
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====Mary====<br />
This week I read an article about an experiment done on wine and lab strains of yeast in different temperatures. The experimenters used DNA microarrays to determine which genes were affected by the change in temperatures and which were different based on the different strains of yeast. While reading the article, I can across words I had never seen before, so I also found and recorded the definitions of these words. I then made an outline of the article, to use as a basis for my presentation with our project manager, [[user:hhinsch| Hayden]]. All of this is on my [[mbalducc Week 12| Week 12]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 19:51, 19 November 2017 (PST)<br />
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====Nicole====<br />
Because Arash and I presented last week, we didn't have a heavy work load this week. Arash explained a lot of technical things to me, and we completed the first coding milestones and talked about design possibilities. I officially have a GitHub (nicolekal). I also downloaded the software I needed but didn't have onto my laptop. A full update can be found on: [[Nicolekalcic Week 12] | Nicole Kalcic Week 12]. [[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 23:45, 20 November 2017 (PST)<br />
<br />
====Hayden====<br />
This week I worked with Mary specifically in order to complete our journal club presentation. As a group we worked together to make corrections to the [[Page Desiigner]] group page in order to complete the deliverables for this week. Mary and I created a schedule for our group along with helpful links. As a class we decided we will be using WhatsApp to communicate. I spent most of this week outlining the article (it was a pretty difficult read) and defining terms on my [[hhinsch Week 12]] page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 17:42, 20 November 2017 (PST)<br />
<br />
===[[Week 14]] Executive Summaries===<br />
====Arash====<br />
This week I worked on implementing our designs for the web page. Nicole and Hayden helped come up with some design ideas. We ended up deciding that ACT1 was a very well designed page and that it would be best to follow the format of that page. There's only a few things left to do but our portion of the project is nearly complete, the generic version of every gene's page needs just a few finishing touches. [[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 18:19, 4 December 2017 (PST)<br />
<br />
====Mary====<br />
This week I finished the Week 10 assignment, using YEASTRACT and GRNsight. I specifically chose one profile from the STEM results to use in YEASTRACT to find transcription factors that regulate a cluster of genes. First I uploaded the genes from profile #22 into YEASTRACT to find 20 significant transcription factors that regulate them. Then, I used Excel to get rid of the transcription factors that were not related to other transcription factors. Once I had those, I imported them into GRNsight to create a map of the transcription factors and their relations to each other. I took a screenshot of this map and uploaded it to my [[mbalducc Week 14| Week 14]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 19:14, 4 December 2017 (PST)<br />
<br />
====Nicole====<br />
<br />
<br />
====Hayden====<br />
This week I served as a "floater". I worked with Nicole and Arash in order to come up with how the page design prototype would look. We decided to use the ACT1 design along with Nicole's sketch in order to find a balance between aesthetic and function. The design we used is downloadable from this page and my [[hhinsch Week 14]] page. My [[hhinsch Week 14]] page has some more information regarding why we chose our current prototype design. I also spoke with Mary to make sure she knew I was there to help with her deliverables if needed. I also spent time with the other QA's this week in order to familiarize myself with the deliverables of the other groups. This was necessary for me to make sure we added everything to the page that is required. I uploaded images to my [hhinsch Week 14]] page as well as this page in order to further clarify our thought process behind the page prototype. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 20:16, 4 December 2017 (PST)<br />
<br />
==Team Progress Reflections==<br />
<br />
===[[Week 11]] Team Progress Reflections===<br />
<br />
====Nicole====<br />
# What worked?<br />
#* We all work well in our positions. Arash and I worked together recently, so it was easy to coordinate what we are going to do as coder and designer. Everyone was open to opinions on the page and team name. Also, everyone communicated what they were having trouble finishing. <br />
# What didn't work?<br />
#* Like Mary said, we weren't able to meet in person. We planned out our meetup during class, but Friday ended up being a busy day for everyone. <br />
# What will I do next to fix what didn't work?<br />
#* Next week I will make sure to check in more with my partners. Even if we don't meet up, it is important to make sure everyone is caught up on the assignment and their individual parts. <br />
====Mary====<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
====Hayden====<br />
# What worked?<br />
#*We are all doing well communicating and completing our deliverables as individuals and as a group.<br />
# What didn't work?<br />
#*Everything worked well in regards to the group, but I did have some trouble finding all the information needed to create an annotated bibliography for the articles I used. Google Scholar gave me way too many results, and PubMed did not have a lot of articles that were either free or LMU had paid for.<br />
# What will I do next to fix what didn't work?<br />
#*I will continue to ask questions in class. I also feel more confident about finding useful articles after the completion of this assignment, so it shouldn't be a problem.<br />
[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:44, 13 November 2017 (PST)<br />
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====Arash====<br />
<br />
# What worked?<br />
#*We were good at maintaining our own individual tasks and keeping each other updated via text message.<br />
<br />
# What didn't work?<br />
#*We were unable to schedule time to meet and work effectively. <br />
<br />
# What will I do next to fix what didn't work?<br />
#*Hopefully we will have lighter course loads and more free time for the next assignment, but besides that we will begin working sooner and try to work in person more than digitally.<br />
<br />
<br />
===[[Week 12]] Team Progress Reflections===<br />
<br />
====Arash====<br />
# What worked?<br />
#*I think we all got a better grasp of the assignment and time management for the assignment. We have a clear idea where we're headed.<br />
# What didn't work?<br />
#* I wish we had more time to dedicate to this class, as often our schedules don't line up. <br />
# What will I do next to fix what didn't work?<br />
#*We'll try to be more proactive about all our tasks so they don't pile up. I'm planning on starting some work during the thanksgiving break to lighten the load afterwards.<br />
====Mary====<br />
# What worked?<br />
#*I think that this week I felt more comfortable with the project as a whole. I also liked presenting after the other guilds because I got to see their presentations to get a better idea of what we should include in ours.<br />
# What didn't work?<br />
#*I wish that I had more time to read the article and make the presentation. I felt that I didn't understand the article completely, and had to read it a few times to be happy with the way that I understood it and formed my outline of it. Because of this, I couldn't spend as much time as I would've wanted on making the presentation.<br />
# What will I do next to fix what didn't work?<br />
#*I will try to spend more time on the entire project, instead of just one part.<br />
<br />
====Nicole====<br />
#What Worked?<br />
#*Arash and I communicated via text and had a better idea of what we needed to do earlier on in the week, which made it easier to progress and do quality, time efficient work. <br />
#What didn't work?<br />
#*We weren't all able to meet in person. I don't know if this was a huge issue this week, but scheduling conflicts might become more of a problem in December. <br />
#What will I do next week to fix what didn't work?<br />
#*Next week I will try to make plans with the group on Tuesday. I am assuming everyone is going out of town for Thanksgiving, but perhaps we can make certain dates within the week to have things done by so the rest of the group can look over the work.<br />
<br />
====Hayden====<br />
#What Worked?<br />
#*This week we were a little more prepared to work together and complete the deliverables. As time goes by the end goal is becoming more apparent.<br />
#What didn't work?<br />
#*I spent a lot of time reading the article multiple times and it is still a bit confusing to me. A lot of the vocabulary wasn't even found in the dictionaries we provided and a lot of the information needed a lot of background knowledge to comprehend.<br />
#What will I do next week to fix what didn't work?<br />
#*Next week I will try and do the bulk of the assignment earlier in the week rather than on the weekend, so I may have more time to understand the material.[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 21:09, 20 November 2017 (PST)<br />
<br />
===[[Week 14]] Team Progress Reflections===<br />
<br />
====Arash====<br />
# What worked?<br />
#* Our design idea turned out pretty nicely, and was not that difficult to implement.<br />
# What didn't work?<br />
#* Coming up with what the final aesthetics will look like.<br />
# What will I do next to fix what didn't work?<br />
#* We will discuss the matter in class with the professors and our fellow students to see what works best for everyone.<br />
<br />
====Mary====<br />
#What worked?<br />
#*Using YEASTRACT, Excel, and GRNsight to create a map of significant transcription factors in the profile I chose.<br />
#What didn't work?<br />
#*I have not fixed Weeks 8 and 10 as much as I would have wanted to.<br />
#What will I do next to fix what didn't work?<br />
#*Take more time, make sure I do things right the first time so I don't have to back and fix them later.<br />
<br />
====Hayden====<br />
# What worked?<br />
#* We did a pretty good job getting everything done we needed to get done this week in a timely fashion while dealing with adversity.<br />
# What didn't work?<br />
#* We still need to complete the prototype and add the other groups' deliverables to our page.<br />
# What will I do next to fix what didn't work?<br />
#* We just simply need to take a final assessment of the deliverables as well as gather feedback from the entire class regarding the final layout of the page.<br />
<br />
====Nicole====<br />
# What worked?<br />
#* We completed the basic structure of the page, and everyone was able to finish their work in time despite my absence on Thursday. <br />
# What didn't work?<br />
#* We haven't finalized anything yet, or implemented any information into the page. <br />
# What will I do next to fix what didn't work?<br />
#* We will talk with everyone in class, including the Dahlquist and Dionisio in order to make final decisions moving into Week 15. <br />
<br />
<br />
===[[Week 15]] Team Progress Reflections===<br />
====Arash====<br />
This week I worked on adding the finishing touches to our info.html file in order to make the information easier to digest and nicer to look at. I also worked on my parts of the group presentation and report, which basically entailed me writing out, in detail, everything I did for the GRNsight project. I also wrote an individual statement of work that I emailed to the professors.<br />
[[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 22:44, 14 December 2017 (PST)<br />
[[ArashLari_Week_15|ArashLari Week 15]]<br />
====Hayden====<br />
This week I helped complete the final presentation for our team as well as the final paper. I made sure all of the deliverables were accurately produced as well as formulates the final presentation and final paper layout. In regards to what worked and what didn't work, everything was completed on time and we all communicated fairly effectively so I don't have anything to note on. Our deliverables can be found on my [[Page Desiigner Deliverables Page]] page. A More detailed summary of work can be found on my [[hhinsch Week 15]] page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 06:21, 15 December 2017 (PST)<br />
<br />
====Mary====<br />
====Nicole====<br />
{{Pagedesiigner}}<br />
This week, I helped format the presentation. I also completed my part of the group paper. In addition, I created a logo for GRNSight on Adobe Illustrator. Arash wanted a bar for the top of the page that had a small logo on it. This was done as a scalable vector graphic and then emailed to Arash. <br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 10:32, 15 December 2017 (PST)</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_15&diff=5443
Nicolekalcic Week 15
2017-12-05T22:59:29Z
<p>Nicolekalcic: formatting</p>
<hr />
<div>==Electronic Journal==<br />
<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:59, 5 December 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 15. Retrieved December 5th, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_15<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Template:Nicolekalcic&diff=5440
Template:Nicolekalcic
2017-12-05T22:57:51Z
<p>Nicolekalcic: changed week 11</p>
<hr />
<div>[[User:Nicolekalcic|Nicole Kalcic's Homepage]]<br />
<br />
<br />
'''Assignment:''' [[Week 1]] <br />
'''Shared Journal:''' [[ Class Journal Week 1]]<br />
'''Individual Journal:''' [[User:Nicolekalcic|User Page]]<br />
<br />
'''Assignment:''' [[Week 2]]<br />
'''Shared Journal:''' [[Class Journal Week 2]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 2]]<br />
<br />
'''Assignment:''' [[Week 3]]<br />
'''Shared Journal:''' [[Class Journal Week 3]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 3]]<br />
<br />
'''Assignment:''' [[Week 4]]<br />
'''Shared Journal:''' [[Class Journal Week 4]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 4]]<br />
<br />
'''Assignment:''' [[Week 5]]<br />
'''Shared Journal:''' [[Class Journal Week 5]]<br />
'''Individual Journal:''' [[The Monarch Initiative|Nicolekalcic Week 5]]<br />
<br />
'''Assignment:''' [[Week 6]]<br />
'''Shared Journal:''' [[Class Journal Week 6]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 6]]<br />
<br />
'''Assignment:''' [[Week 7]]<br />
'''Shared Journal:''' [[Class Journal Week 7]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 7]]<br />
<br />
'''Assignment:''' [[Week 8]]<br />
'''Shared Journal:''' [[Class Journal Week 8]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 8]]<br />
<br />
'''Assignment:''' [[Week 9]]<br />
'''Shared Journal:''' [[Class Journal Week 9]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 9]]<br />
<br />
'''Assignment:''' [[Week 10]]<br />
'''Shared Journal:''' [[Class Journal Week 10]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 10]]<br />
<br />
'''Assignment:''' [[Week 11]]<br />
'''Shared Journal:''' Not Available<br />
'''Individual Journal:''' [[Nicolekalcic Week 11]]<br />
<br />
'''Assignment:''' [[Week 12]]<br />
'''Shared Journal:''' Not Available<br />
'''Individual Journal:''' [[Nicolekalcic Week 12]]<br />
<br />
'''Assignment:''' [[Week 14]]<br />
'''Shared Journal:''' Not Available<br />
'''Individual Journal:''' [[Nicolekalcic Week 14]]<br />
<br />
'''Assignment:''' [[Week 15]]<br />
'''Shared Journal:''' Not Available<br />
'''Individual Journal:''' [[Nicolekalcic Week 15]]<br />
<br />
[[Category:Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Template:Nicolekalcic&diff=5437
Template:Nicolekalcic
2017-12-05T22:56:59Z
<p>Nicolekalcic: changed shared journals</p>
<hr />
<div>[[User:Nicolekalcic|Nicole Kalcic's Homepage]]<br />
<br />
<br />
'''Assignment:''' [[Week 1]] <br />
'''Shared Journal:''' [[ Class Journal Week 1]]<br />
'''Individual Journal:''' [[User:Nicolekalcic|User Page]]<br />
<br />
'''Assignment:''' [[Week 2]]<br />
'''Shared Journal:''' [[Class Journal Week 2]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 2]]<br />
<br />
'''Assignment:''' [[Week 3]]<br />
'''Shared Journal:''' [[Class Journal Week 3]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 3]]<br />
<br />
'''Assignment:''' [[Week 4]]<br />
'''Shared Journal:''' [[Class Journal Week 4]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 4]]<br />
<br />
'''Assignment:''' [[Week 5]]<br />
'''Shared Journal:''' [[Class Journal Week 5]]<br />
'''Individual Journal:''' [[The Monarch Initiative|Nicolekalcic Week 5]]<br />
<br />
'''Assignment:''' [[Week 6]]<br />
'''Shared Journal:''' [[Class Journal Week 6]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 6]]<br />
<br />
'''Assignment:''' [[Week 7]]<br />
'''Shared Journal:''' [[Class Journal Week 7]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 7]]<br />
<br />
'''Assignment:''' [[Week 8]]<br />
'''Shared Journal:''' [[Class Journal Week 8]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 8]]<br />
<br />
'''Assignment:''' [[Week 9]]<br />
'''Shared Journal:''' [[Class Journal Week 9]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 9]]<br />
<br />
'''Assignment:''' [[Week 10]]<br />
'''Shared Journal:''' [[Class Journal Week 10]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 10]]<br />
<br />
'''Assignment:''' [[Week 11]]<br />
'''Shared Journal:''' [[Class Journal Week 11]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 11]]<br />
<br />
'''Assignment:''' [[Week 12]]<br />
'''Shared Journal:''' Not Available<br />
'''Individual Journal:''' [[Nicolekalcic Week 12]]<br />
<br />
'''Assignment:''' [[Week 14]]<br />
'''Shared Journal:''' Not Available<br />
'''Individual Journal:''' [[Nicolekalcic Week 14]]<br />
<br />
'''Assignment:''' [[Week 15]]<br />
'''Shared Journal:''' Not Available<br />
'''Individual Journal:''' [[Nicolekalcic Week 15]]<br />
<br />
[[Category:Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Template:Nicolekalcic&diff=5434
Template:Nicolekalcic
2017-12-05T22:55:05Z
<p>Nicolekalcic: added week 15</p>
<hr />
<div>[[User:Nicolekalcic|Nicole Kalcic's Homepage]]<br />
<br />
<br />
'''Assignment:''' [[Week 1]] <br />
'''Shared Journal:''' [[ Class Journal Week 1]]<br />
'''Individual Journal:''' [[User:Nicolekalcic|User Page]]<br />
<br />
'''Assignment:''' [[Week 2]]<br />
'''Shared Journal:''' [[Class Journal Week 2]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 2]]<br />
<br />
'''Assignment:''' [[Week 3]]<br />
'''Shared Journal:''' [[Class Journal Week 3]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 3]]<br />
<br />
'''Assignment:''' [[Week 4]]<br />
'''Shared Journal:''' [[Class Journal Week 4]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 4]]<br />
<br />
'''Assignment:''' [[Week 5]]<br />
'''Shared Journal:''' [[Class Journal Week 5]]<br />
'''Individual Journal:''' [[The Monarch Initiative|Nicolekalcic Week 5]]<br />
<br />
'''Assignment:''' [[Week 6]]<br />
'''Shared Journal:''' [[Class Journal Week 6]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 6]]<br />
<br />
'''Assignment:''' [[Week 7]]<br />
'''Shared Journal:''' [[Class Journal Week 7]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 7]]<br />
<br />
'''Assignment:''' [[Week 8]]<br />
'''Shared Journal:''' [[Class Journal Week 8]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 8]]<br />
<br />
'''Assignment:''' [[Week 9]]<br />
'''Shared Journal:''' [[Class Journal Week 9]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 9]]<br />
<br />
'''Assignment:''' [[Week 10]]<br />
'''Shared Journal:''' [[Class Journal Week 10]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 10]]<br />
<br />
'''Assignment:''' [[Week 11]]<br />
'''Shared Journal:''' [[Class Journal Week 11]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 11]]<br />
<br />
'''Assignment:''' [[Week 12]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 12]]<br />
<br />
'''Assignment:''' [[Week 14]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 14]]<br />
<br />
'''Assignment:''' [[Week 15]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 15]]<br />
<br />
[[Category:Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=5431
Page Desiigner
2017-12-05T20:29:05Z
<p>Nicolekalcic: answered questions/* Nicole */</p>
<hr />
<div>[[Category:Page Desiigner]]<br />
[[Category:Group Projects]]<br />
<br />
<br />
<br />
==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
<br><br />
Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
<br><br />
Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
<br><br />
Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
<br />
==Team Schedule==<br />
[[Page Desiigner Schedule]]<br />
<br />
==Page Desiigner Uploaded Files==<br />
<br />
[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
<br><br />
[[File:Data Driven Design.zip]]<br />
<br />
==Page Layout==<br />
*<code>Below are a series of rough ideas we will use to create the layout of the page</code><br />
[[File:ACT1screenshot.png|500px]]<br />
*We will be using a layout similar to the ACT1 gene page.<br />
[[File:Sketchofpagedesign.png]]<br />
*This is a rough sketch of what the page will look like.<br />
*The section labeled '''description''' on the sketch will include the following:<br />
**Gene ID from each database<br />
**Description/Function (ensembl)<br />
*Within the dropdown menus we will be incorporating the following:<br />
**DNA Sequence (ensembl)<br />
**Protein Sequence (UniProt)<br />
**Locus tag (NCBI)<br />
**Also Known As (NCBI)<br />
**Consensus Sequence (JASPAR)<br />
**Regulation (SGD)<br />
**Interaction (SGD)<br />
**Similar Proteins (UniProt)<br />
**Gene Ontology (SGD)<br />
**JASPAR<br />
***Matrix ID <br />
***Class Heat shock factors<br />
***Family HSF factors<br />
***Sequence Logo <br />
***Frequency Matrix<br />
*A zip file containing the html file of prototype page can be downloaded by clicking the <code>pagedesignprototype.zip</code> link below.<br />
[[File:Pagedesignprototype.zip]]<br />
<br />
<br />
<br />
==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*Publisher: American Society for Microbiology. This is a scientific society.<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
<br />
<br />
Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*Publisher: Elsevier. This is a for-profit publisher<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
<br />
===Hayden's Contribution===<br />
<br />
Dahlquist, K. D., Fitzpatrick, B. G., Camacho, E. T., Entzminger, S. D., & Wanner, N. C. (2015). Parameter Estimation for Gene Regulatory Networks from Microarray Data: Cold Shock Response in Saccharomyces cerevisiae. Bulletin of Mathematical Biology, 77(8), 1457–1492. http://doi.org/10.1007/s11538-015-0092-6<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/26420504<br />
* PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/<br />
* Publisher Full Text (HTML): https://link.springer.com/article/10.1007/s11538-015-0092-6<br />
* Publisher Full Text (PDF): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/pdf/11538_2015_Article_92.pdf<br />
* Copyright: The Author(s) 2015. Open Access: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.<br />
* Publisher: Bulletin of Mathematical Biology(scientific society)<br />
* Availability: Online<br />
* Did LMU pay a fee for this article: No<br />
* Data: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/bin/11538_2015_92_MOESM1_ESM.zip<br />
<br />
<br />
Ando, A., Nakamura, T., Murata, Y., Takagi, H. and Shima, J. (2007), Identification and classification of genes required for tolerance to freeze–thaw stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains. FEMS Yeast Research, 7: 244–253. doi:10.1111/j.1567-1364.2006.00162.x<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/16989656<br />
* PubMed Central: N/A<br />
* Publisher Full Text (HTML): https://academic.oup.com/femsyr/article/7/2/244/616825?searchresult=1<br />
* Publisher Full Text (PDF): http://onlinelibrary.wiley.com/doi/10.1111/j.1567-1364.2006.00162.x/epdf<br />
* Copyright: Copyright © 2007, Oxford University Press; Open Access after time has elapsed: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. You must ask permission from the publisher to use the article.<br />
* Publisher: Published by Oxford University Press(respected open access organization)<br />
* Availability: Online and in print<br />
* Did LMU pay a fee for this article: No<br />
* Data: I couldn't find any supplementary data other than the data provided in the article.<br />
<br />
<br />
<br />
<br />
==Journal Club Presentations==<br />
===Powerpoint Slides and Respective Articles===<br />
[[File:Data Driven Design.zip]]<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
<br><br />
[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
*Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
<br />
==Executive Summaries==<br />
<br />
<br />
===[[Week 11]] Executive Summaries===<br />
====Arash====<br />
This week, I worked on researching the given article and the development terms within it as well as prepare a presentation on the article. I also began thinking of some page layout ideas with Nicole to prepare to implement in the coming weeks. All of this information could be found on my Week 11 page: [[ArashLari_Week_11|ArashLari Week 11]].<br />
[[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 02:09, 14 November 2017 (PST)<br />
====Mary====<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 23:03, 13 November 2017 (PST)<br />
<br />
====Nicole====<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The presentation gives an overview of our individual journals and what we each learned. You can access more information on what I did this week here: [[Nicolekalcic Week 11]].<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 01:27, 14 November 2017 (PST)<br />
====Hayden====<br />
This week I created part of the annotated bibliography we will be using for our final project. I conducted searched for "yeast cold shock microarray" articles and found which two articles I was going to use for the bibliography. The majority of the time this week was spent on finding the information needed for the annotated bibliography which can be found below on this page. More detailed information can be found on my [[hhinsch Week 11]] page. This week I became proficient in finding reliable article to use for our final project. This week we also created the group's template and wiki page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:43, 13 November 2017 (PST)<br />
<br />
===[[Week 12]] Executive Summaries===<br />
====Arash====<br />
This week was rather light compared to the previous week. We mostly set up the files on our personal computers, which was convenient because as a computer science major I already had most of the necessary files. Nicole and I talked about some preliminary designs and set up a rough schedule that we'll make concrete after the break. This can be found on my week 12 page [[ArashLari Week 12] | Arash Lari Week 12]. [[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 20:43, 20 November 2017 (PST)<br />
<br />
====Mary====<br />
This week I read an article about an experiment done on wine and lab strains of yeast in different temperatures. The experimenters used DNA microarrays to determine which genes were affected by the change in temperatures and which were different based on the different strains of yeast. While reading the article, I can across words I had never seen before, so I also found and recorded the definitions of these words. I then made an outline of the article, to use as a basis for my presentation with our project manager, [[user:hhinsch| Hayden]]. All of this is on my [[mbalducc Week 12| Week 12]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 19:51, 19 November 2017 (PST)<br />
<br />
====Nicole====<br />
Because Arash and I presented last week, we didn't have a heavy work load this week. Arash explained a lot of technical things to me, and we completed the first coding milestones and talked about design possibilities. I officially have a GitHub (nicolekal). I also downloaded the software I needed but didn't have onto my laptop. A full update can be found on: [[Nicolekalcic Week 12] | Nicole Kalcic Week 12]. [[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 23:45, 20 November 2017 (PST)<br />
<br />
====Hayden====<br />
This week I worked with Mary specifically in order to complete our journal club presentation. As a group we worked together to make corrections to the [[Page Desiigner]] group page in order to complete the deliverables for this week. Mary and I created a schedule for our group along with helpful links. As a class we decided we will be using WhatsApp to communicate. I spent most of this week outlining the article (it was a pretty difficult read) and defining terms on my [[hhinsch Week 12]] page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 17:42, 20 November 2017 (PST)<br />
<br />
===[[Week 14]] Executive Summaries===<br />
====Arash====<br />
This week I worked on implementing our designs for the web page. Nicole and Hayden helped come up with some design ideas. We ended up deciding that ACT1 was a very well designed page and that it would be best to follow the format of that page. There's only a few things left to do but our portion of the project is nearly complete, the generic version of every gene's page needs just a few finishing touches. [[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 18:19, 4 December 2017 (PST)<br />
<br />
====Mary====<br />
This week I finished the Week 10 assignment, using YEASTRACT and GRNsight. I specifically chose one profile from the STEM results to use in YEASTRACT to find transcription factors that regulate a cluster of genes. First I uploaded the genes from profile #22 into YEASTRACT to find 20 significant transcription factors that regulate them. Then, I used Excel to get rid of the transcription factors that were not related to other transcription factors. Once I had those, I imported them into GRNsight to create a map of the transcription factors and their relations to each other. I took a screenshot of this map and uploaded it to my [[mbalducc Week 14| Week 14]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 19:14, 4 December 2017 (PST)<br />
<br />
====Nicole====<br />
<br />
<br />
====Hayden====<br />
This week I served as a "floater". I worked with Nicole and Arash in order to come up with how the page design prototype would look. We decided to use the ACT1 design along with Nicole's sketch in order to find a balance between aesthetic and function. The design we used is downloadable from this page and my [[hhinsch Week 14]] page. My [[hhinsch Week 14]] page has some more information regarding why we chose our current prototype design. I also spoke with Mary to make sure she knew I was there to help with her deliverables if needed. I also spent time with the other QA's this week in order to familiarize myself with the deliverables of the other groups. This was necessary for me to make sure we added everything to the page that is required. I uploaded images to my [hhinsch Week 14]] page as well as this page in order to further clarify our thought process behind the page prototype. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 20:16, 4 December 2017 (PST)<br />
<br />
==Team Progress Reflections==<br />
<br />
===[[Week 11]] Team Progress Reflections===<br />
<br />
====Nicole====<br />
# What worked?<br />
#* We all work well in our positions. Arash and I worked together recently, so it was easy to coordinate what we are going to do as coder and designer. Everyone was open to opinions on the page and team name. Also, everyone communicated what they were having trouble finishing. <br />
# What didn't work?<br />
#* Like Mary said, we weren't able to meet in person. We planned out our meetup during class, but Friday ended up being a busy day for everyone. <br />
# What will I do next to fix what didn't work?<br />
#* Next week I will make sure to check in more with my partners. Even if we don't meet up, it is important to make sure everyone is caught up on the assignment and their individual parts. <br />
====Mary====<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
====Hayden====<br />
# What worked?<br />
#*We are all doing well communicating and completing our deliverables as individuals and as a group.<br />
# What didn't work?<br />
#*Everything worked well in regards to the group, but I did have some trouble finding all the information needed to create an annotated bibliography for the articles I used. Google Scholar gave me way too many results, and PubMed did not have a lot of articles that were either free or LMU had paid for.<br />
# What will I do next to fix what didn't work?<br />
#*I will continue to ask questions in class. I also feel more confident about finding useful articles after the completion of this assignment, so it shouldn't be a problem.<br />
[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:44, 13 November 2017 (PST)<br />
<br />
====Arash====<br />
<br />
# What worked?<br />
#*We were good at maintaining our own individual tasks and keeping each other updated via text message.<br />
<br />
# What didn't work?<br />
#*We were unable to schedule time to meet and work effectively. <br />
<br />
# What will I do next to fix what didn't work?<br />
#*Hopefully we will have lighter course loads and more free time for the next assignment, but besides that we will begin working sooner and try to work in person more than digitally.<br />
<br />
<br />
===[[Week 12]] Team Progress Reflections===<br />
<br />
====Arash====<br />
# What worked?<br />
#*I think we all got a better grasp of the assignment and time management for the assignment. We have a clear idea where we're headed.<br />
# What didn't work?<br />
#* I wish we had more time to dedicate to this class, as often our schedules don't line up. <br />
# What will I do next to fix what didn't work?<br />
#*We'll try to be more proactive about all our tasks so they don't pile up. I'm planning on starting some work during the thanksgiving break to lighten the load afterwards.<br />
====Mary====<br />
# What worked?<br />
#*I think that this week I felt more comfortable with the project as a whole. I also liked presenting after the other guilds because I got to see their presentations to get a better idea of what we should include in ours.<br />
# What didn't work?<br />
#*I wish that I had more time to read the article and make the presentation. I felt that I didn't understand the article completely, and had to read it a few times to be happy with the way that I understood it and formed my outline of it. Because of this, I couldn't spend as much time as I would've wanted on making the presentation.<br />
# What will I do next to fix what didn't work?<br />
#*I will try to spend more time on the entire project, instead of just one part.<br />
<br />
====Nicole====<br />
#What Worked?<br />
#*Arash and I communicated via text and had a better idea of what we needed to do earlier on in the week, which made it easier to progress and do quality, time efficient work. <br />
#What didn't work?<br />
#*We weren't all able to meet in person. I don't know if this was a huge issue this week, but scheduling conflicts might become more of a problem in December. <br />
#What will I do next week to fix what didn't work?<br />
#*Next week I will try to make plans with the group on Tuesday. I am assuming everyone is going out of town for Thanksgiving, but perhaps we can make certain dates within the week to have things done by so the rest of the group can look over the work.<br />
<br />
====Hayden====<br />
#What Worked?<br />
#*This week we were a little more prepared to work together and complete the deliverables. As time goes by the end goal is becoming more apparent.<br />
#What didn't work?<br />
#*I spent a lot of time reading the article multiple times and it is still a bit confusing to me. A lot of the vocabulary wasn't even found in the dictionaries we provided and a lot of the information needed a lot of background knowledge to comprehend.<br />
#What will I do next week to fix what didn't work?<br />
#*Next week I will try and do the bulk of the assignment earlier in the week rather than on the weekend, so I may have more time to understand the material.[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 21:09, 20 November 2017 (PST)<br />
<br />
===[[Week 14]] Team Progress Reflections===<br />
<br />
====Arash====<br />
# What worked?<br />
#* Our design idea turned out pretty nicely, and was not that difficult to implement.<br />
# What didn't work?<br />
#* Coming up with what the final aesthetics will look like.<br />
# What will I do next to fix what didn't work?<br />
#* We will discuss the matter in class with the professors and our fellow students to see what works best for everyone.<br />
<br />
====Mary====<br />
#What worked?<br />
#*Using YEASTRACT, Excel, and GRNsight to create a map of significant transcription factors in the profile I chose.<br />
#What didn't work?<br />
#*I have not fixed Weeks 8 and 10 as much as I would have wanted to.<br />
#What will I do next to fix what didn't work?<br />
#*Take more time, make sure I do things right the first time so I don't have to back and fix them later.<br />
<br />
====Hayden====<br />
# What worked?<br />
#* We did a pretty good job getting everything done we needed to get done this week in a timely fashion while dealing with adversity.<br />
# What didn't work?<br />
#* We still need to complete the prototype and add the other groups' deliverables to our page.<br />
# What will I do next to fix what didn't work?<br />
#* We just simply need to take a final assessment of the deliverables as well as gather feedback from the entire class regarding the final layout of the page.<br />
<br />
====Nicole====<br />
# What worked?<br />
#* We completed the basic structure of the page, and everyone was able to finish their work in time despite my absence on Thursday. <br />
# What didn't work?<br />
#* We haven't finalized anything yet, or implemented any information into the page. <br />
# What will I do next to fix what didn't work?<br />
#* We will talk with everyone in class, including the Dahlquist and Dionisio in order to make final decisions moving into Week 15. <br />
{{Pagedesiigner}}</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_14&diff=5430
Nicolekalcic Week 14
2017-12-05T20:25:55Z
<p>Nicolekalcic: added journal</p>
<hr />
<div>==Electronic Journal==<br />
This week, I combed through the different pages from My Favorite Gene, making note of the ones people liked best and why they liked them so much. Despite some pages having a higher tally for up votes than others, I chose the pages I personally felt looked the best to model our assignment after. I talked with Dr. Dahlquist and Dionisio, and felt comfortable drawing a sample similar to the ACT1 page to show to Arash. The team agreed that the ACT1 setup would work the best. Arash did the basic setup of the page. There are a few things we need to workout, and we are going to finalize design choices. But, we now feel comfortable that we have a structure to show everyone and work off of. <br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 12:20, 5 December 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 14. Retrieved December 4th, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_14<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_14&diff=5429
Nicolekalcic Week 14
2017-12-05T20:20:06Z
<p>Nicolekalcic: formatting</p>
<hr />
<div>==Electronic Journal==<br />
This week, Arash and I worked on [[Coder]] Milestones 0-4. As [[User: ArashLari|Arash]] <br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 12:20, 5 December 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 14. Retrieved December 4th, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_14<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Template:Nicolekalcic&diff=5139
Template:Nicolekalcic
2017-11-28T22:52:51Z
<p>Nicolekalcic: fixed brackets</p>
<hr />
<div>[[User:Nicolekalcic|Nicole Kalcic's Homepage]]<br />
<br />
<br />
'''Assignment:''' [[Week 1]] <br />
'''Shared Journal:''' [[ Class Journal Week 1]]<br />
'''Individual Journal:''' [[User:Nicolekalcic|User Page]]<br />
<br />
'''Assignment:''' [[Week 2]]<br />
'''Shared Journal:''' [[Class Journal Week 2]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 2]]<br />
<br />
'''Assignment:''' [[Week 3]]<br />
'''Shared Journal:''' [[Class Journal Week 3]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 3]]<br />
<br />
'''Assignment:''' [[Week 4]]<br />
'''Shared Journal:''' [[Class Journal Week 4]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 4]]<br />
<br />
'''Assignment:''' [[Week 5]]<br />
'''Shared Journal:''' [[Class Journal Week 5]]<br />
'''Individual Journal:''' [[The Monarch Initiative|Nicolekalcic Week 5]]<br />
<br />
'''Assignment:''' [[Week 6]]<br />
'''Shared Journal:''' [[Class Journal Week 6]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 6]]<br />
<br />
'''Assignment:''' [[Week 7]]<br />
'''Shared Journal:''' [[Class Journal Week 7]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 7]]<br />
<br />
'''Assignment:''' [[Week 8]]<br />
'''Shared Journal:''' [[Class Journal Week 8]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 8]]<br />
<br />
'''Assignment:''' [[Week 9]]<br />
'''Shared Journal:''' [[Class Journal Week 9]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 9]]<br />
<br />
'''Assignment:''' [[Week 10]]<br />
'''Shared Journal:''' [[Class Journal Week 10]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 10]]<br />
<br />
'''Assignment:''' [[Week 11]]<br />
'''Shared Journal:''' [[Class Journal Week 11]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 11]]<br />
<br />
'''Assignment:''' [[Week 12]]<br />
'''Shared Journal:''' [[Class Journal Week 12]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 12]]<br />
<br />
'''Assignment:''' [[Week 14]]<br />
'''Shared Journal:''' [[Class Journal Week 14]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 14]]<br />
<br />
[[Category:Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Template:Nicolekalcic&diff=5138
Template:Nicolekalcic
2017-11-28T22:52:24Z
<p>Nicolekalcic: added week 14</p>
<hr />
<div>[[User:Nicolekalcic|Nicole Kalcic's Homepage]]<br />
<br />
<br />
'''Assignment:''' [[Week 1]] <br />
'''Shared Journal:''' [[ Class Journal Week 1]]<br />
'''Individual Journal:''' [[User:Nicolekalcic|User Page]]<br />
<br />
'''Assignment:''' [[Week 2]]<br />
'''Shared Journal:''' [[Class Journal Week 2]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 2]]<br />
<br />
'''Assignment:''' [[Week 3]]<br />
'''Shared Journal:''' [[Class Journal Week 3]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 3]]<br />
<br />
'''Assignment:''' [[Week 4]]<br />
'''Shared Journal:''' [[Class Journal Week 4]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 4]]<br />
<br />
'''Assignment:''' [[Week 5]]<br />
'''Shared Journal:''' [[Class Journal Week 5]]<br />
'''Individual Journal:''' [[The Monarch Initiative|Nicolekalcic Week 5]]<br />
<br />
'''Assignment:''' [[Week 6]]<br />
'''Shared Journal:''' [[Class Journal Week 6]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 6]]<br />
<br />
'''Assignment:''' [[Week 7]]<br />
'''Shared Journal:''' [[Class Journal Week 7]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 7]]<br />
<br />
'''Assignment:''' [[Week 8]]<br />
'''Shared Journal:''' [[Class Journal Week 8]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 8]]<br />
<br />
'''Assignment:''' [[Week 9]]<br />
'''Shared Journal:''' [[Class Journal Week 9]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 9]]<br />
<br />
'''Assignment:''' [[Week 10]]<br />
'''Shared Journal:''' [[Class Journal Week 10]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 10]]<br />
<br />
'''Assignment:''' [[Week 11]]<br />
'''Shared Journal:''' [[Class Journal Week 11]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 11]]<br />
<br />
'''Assignment:''' [[Week 12]]<br />
'''Shared Journal:''' [[Class Journal Week 12]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 12]]<br />
<br />
'''Assignment:''' [[Week 14]]<br />
'''Shared Journal:''' [[Class Journal Week 14<br />
'''Individual Journal:''' [[Nicolekalcic Week 14]]<br />
<br />
[[Category:Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=5052
Page Desiigner
2017-11-21T07:48:45Z
<p>Nicolekalcic: added answers/* Nicole */</p>
<hr />
<div>[[Category:Page Desiigner]]<br />
[[Category:Group Projects]]<br />
<br />
<br />
<br />
==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
<br><br />
Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
<br><br />
Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
<br><br />
Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
<br />
==Team Schedule==<br />
[[Page Desiigner Schedule]]<br />
<br />
==Page Desiigner Uploaded Files==<br />
<br />
[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
<br><br />
[[File:Data Driven Design.zip]]<br />
<br />
<br />
<br />
<br />
==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*Publisher: American Society for Microbiology. This is a scientific society.<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
<br />
<br />
Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*Publisher: Elsevier. This is a for-profit publisher<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
<br />
===Hayden's Contribution===<br />
<br />
Dahlquist, K. D., Fitzpatrick, B. G., Camacho, E. T., Entzminger, S. D., & Wanner, N. C. (2015). Parameter Estimation for Gene Regulatory Networks from Microarray Data: Cold Shock Response in Saccharomyces cerevisiae. Bulletin of Mathematical Biology, 77(8), 1457–1492. http://doi.org/10.1007/s11538-015-0092-6<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/26420504<br />
* PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/<br />
* Publisher Full Text (HTML): https://link.springer.com/article/10.1007/s11538-015-0092-6<br />
* Publisher Full Text (PDF): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/pdf/11538_2015_Article_92.pdf<br />
* Copyright: The Author(s) 2015. Open Access: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.<br />
* Publisher: Bulletin of Mathematical Biology(scientific society)<br />
* Availability: Online<br />
* Did LMU pay a fee for this article: No<br />
* Data: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/bin/11538_2015_92_MOESM1_ESM.zip<br />
<br />
<br />
Ando, A., Nakamura, T., Murata, Y., Takagi, H. and Shima, J. (2007), Identification and classification of genes required for tolerance to freeze–thaw stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains. FEMS Yeast Research, 7: 244–253. doi:10.1111/j.1567-1364.2006.00162.x<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/16989656<br />
* PubMed Central: N/A<br />
* Publisher Full Text (HTML): https://academic.oup.com/femsyr/article/7/2/244/616825?searchresult=1<br />
* Publisher Full Text (PDF): http://onlinelibrary.wiley.com/doi/10.1111/j.1567-1364.2006.00162.x/epdf<br />
* Copyright: Copyright © 2007, Oxford University Press; Open Access after time has elapsed: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. You must ask permission from the publisher to use the article.<br />
* Publisher: Published by Oxford University Press(respected open access organization)<br />
* Availability: Online and in print<br />
* Did LMU pay a fee for this article: No<br />
* Data: I couldn't find any supplementary data other than the data provided in the article.<br />
<br />
<br />
<br />
<br />
==Journal Club Presentations==<br />
===Powerpoint Slides and Respective Articles===<br />
[[File:Data Driven Design.zip]]<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
<br><br />
[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
*Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
<br />
==Executive Summaries==<br />
<br />
<br />
===[[Week 11]] Executive Summaries===<br />
====Arash====<br />
This week, I worked on researching the given article and the development terms within it as well as prepare a presentation on the article. I also began thinking of some page layout ideas with Nicole to prepare to implement in the coming weeks. All of this information could be found on my Week 11 page: [[ArashLari_Week_11|ArashLari Week 11]].<br />
[[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 02:09, 14 November 2017 (PST)<br />
====Mary====<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 23:03, 13 November 2017 (PST)<br />
<br />
====Nicole====<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The presentation gives an overview of our individual journals and what we each learned. You can access more information on what I did this week here: [[Nicolekalcic Week 11]].<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 01:27, 14 November 2017 (PST)<br />
====Hayden====<br />
This week I created part of the annotated bibliography we will be using for our final project. I conducted searched for "yeast cold shock microarray" articles and found which two articles I was going to use for the bibliography. The majority of the time this week was spent on finding the information needed for the annotated bibliography which can be found below on this page. More detailed information can be found on my [[hhinsch Week 11]] page. This week I became proficient in finding reliable article to use for our final project. This week we also created the group's template and wiki page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:43, 13 November 2017 (PST)<br />
<br />
===[[Week 12]] Executive Summaries===<br />
====Arash====<br />
This week was rather light compared to the previous week. We mostly set up the files on our personal computers, which was convenient because as a computer science major I already had most of the necessary files. Nicole and I talked about some preliminary designs and set up a rough schedule that we'll make concrete after the break. This can be found on my week 12 page [[ArashLari Week 12] | Arash Lari Week 12]. [[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 20:43, 20 November 2017 (PST)<br />
<br />
====Mary====<br />
This week I read an article about an experiment done on wine and lab strains of yeast in different temperatures. The experimenters used DNA microarrays to determine which genes were affected by the change in temperatures and which were different based on the different strains of yeast. While reading the article, I can across words I had never seen before, so I also found and recorded the definitions of these words. I then made an outline of the article, to use as a basis for my presentation with our project manager, [[user:hhinsch| Hayden]]. All of this is on my [[mbalducc Week 12| Week 12]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 19:51, 19 November 2017 (PST)<br />
<br />
====Nicole====<br />
Because Arash and I presented last week, we didn't have a heavy work load this week. Arash explained a lot of technical things to me, and we completed the first coding milestones and talked about design possibilities. I officially have a GitHub (nicolekal). I also downloaded the software I needed but didn't have onto my laptop. A full update can be found on: [[Nicolekalcic Week 12] | Nicole Kalcic Week 12]. [[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 23:45, 20 November 2017 (PST)<br />
<br />
====Hayden====<br />
This week I worked with Mary specifically in order to complete our journal club presentation. As a group we worked together to make corrections to the [[Page Desiigner]] group page in order to complete the deliverables for this week. Mary and I created a schedule for our group along with helpful links. As a class we decided we will be using WhatsApp to communicate. I spent most of this week outlining the article (it was a pretty difficult read) and defining terms on my [[hhinsch Week 12]] page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 17:42, 20 November 2017 (PST)<br />
<br />
==Team Progress Reflections==<br />
<br />
===[[Week 11]] Team Progress Reflections===<br />
<br />
====Nicole====<br />
# What worked?<br />
#* We all work well in our positions. Arash and I worked together recently, so it was easy to coordinate what we are going to do as coder and designer. Everyone was open to opinions on the page and team name. Also, everyone communicated what they were having trouble finishing. <br />
# What didn't work?<br />
#* Like Mary said, we weren't able to meet in person. We planned out our meetup during class, but Friday ended up being a busy day for everyone. <br />
# What will I do next to fix what didn't work?<br />
#* Next week I will make sure to check in more with my partners. Even if we don't meet up, it is important to make sure everyone is caught up on the assignment and their individual parts. <br />
====Mary====<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
====Hayden====<br />
# What worked?<br />
#*We are all doing well communicating and completing our deliverables as individuals and as a group.<br />
# What didn't work?<br />
#*Everything worked well in regards to the group, but I did have some trouble finding all the information needed to create an annotated bibliography for the articles I used. Google Scholar gave me way too many results, and PubMed did not have a lot of articles that were either free or LMU had paid for.<br />
# What will I do next to fix what didn't work?<br />
#*I will continue to ask questions in class. I also feel more confident about finding useful articles after the completion of this assignment, so it shouldn't be a problem.<br />
[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:44, 13 November 2017 (PST)<br />
<br />
====Arash====<br />
<br />
# What worked?<br />
#*We were good at maintaining our own individual tasks and keeping each other updated via text message.<br />
<br />
# What didn't work?<br />
#*We were unable to schedule time to meet and work effectively. <br />
<br />
# What will I do next to fix what didn't work?<br />
#*Hopefully we will have lighter course loads and more free time for the next assignment, but besides that we will begin working sooner and try to work in person more than digitally.<br />
<br />
<br />
===[[Week 12]] Team Progress Reflections===<br />
<br />
====Arash====<br />
# What worked?<br />
#*I think we all got a better grasp of the assignment and time management for the assignment. We have a clear idea where we're headed.<br />
# What didn't work?<br />
#* I wish we had more time to dedicate to this class, as often our schedules don't line up. <br />
# What will I do next to fix what didn't work?<br />
#*We'll try to be more proactive about all our tasks so they don't pile up. I'm planning on starting some work during the thanksgiving break to lighten the load afterwards.<br />
====Mary====<br />
# What worked?<br />
#*I think that this week I felt more comfortable with the project as a whole. I also liked presenting after the other guilds because I got to see their presentations to get a better idea of what we should include in ours.<br />
# What didn't work?<br />
#*I wish that I had more time to read the article and make the presentation. I felt that I didn't understand the article completely, and had to read it a few times to be happy with the way that I understood it and formed my outline of it. Because of this, I couldn't spend as much time as I would've wanted on making the presentation.<br />
# What will I do next to fix what didn't work?<br />
#*I will try to spend more time on the entire project, instead of just one part.<br />
<br />
====Nicole====<br />
#What Worked?<br />
#*Arash and I communicated via text and had a better idea of what we needed to do earlier on in the week, which made it easier to progress and do quality, time efficient work. <br />
#What didn't work?<br />
#*We weren't all able to meet in person. I don't know if this was a huge issue this week, but scheduling conflicts might become more of a problem in December. <br />
#What will I do next week to fix what didn't work?<br />
#*Next week I will try to make plans with the group on Tuesday. I am assuming everyone is going out of town for Thanksgiving, but perhaps we can make certain dates within the week to have things done by so the rest of the group can look over the work.<br />
<br />
====Hayden====<br />
#What Worked?<br />
#*This week we were a little more prepared to work together and complete the deliverables. As time goes by the end goal is becoming more apparent.<br />
#What didn't work?<br />
#*I spent a lot of time reading the article multiple times and it is still a bit confusing to me. A lot of the vocabulary wasn't even found in the dictionaries we provided and a lot of the information needed a lot of background knowledge to comprehend.<br />
#What will I do next week to fix what didn't work?<br />
#*Next week I will try and do the bulk of the assignment earlier in the week rather than on the weekend, so I may have more time to understand the material.[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 21:09, 20 November 2017 (PST)<br />
<br />
<br />
{{Pagedesiigner}}</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=5048
Page Desiigner
2017-11-21T07:45:08Z
<p>Nicolekalcic: added new summary /* Nicole */</p>
<hr />
<div>[[Category:Page Desiigner]]<br />
[[Category:Group Projects]]<br />
<br />
<br />
<br />
==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
<br><br />
Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
<br><br />
Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
<br><br />
Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
<br />
==Team Schedule==<br />
[[Page Desiigner Schedule]]<br />
<br />
==Page Desiigner Uploaded Files==<br />
<br />
[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
<br><br />
[[File:Data Driven Design.zip]]<br />
<br />
<br />
<br />
<br />
==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*Publisher: American Society for Microbiology. This is a scientific society.<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
<br />
<br />
Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*Publisher: Elsevier. This is a for-profit publisher<br />
*Availability: Online and in print<br />
*Did LMU pay a fee for this article: No<br />
*I could not find the data associated with this article.<br />
<br />
===Hayden's Contribution===<br />
<br />
Dahlquist, K. D., Fitzpatrick, B. G., Camacho, E. T., Entzminger, S. D., & Wanner, N. C. (2015). Parameter Estimation for Gene Regulatory Networks from Microarray Data: Cold Shock Response in Saccharomyces cerevisiae. Bulletin of Mathematical Biology, 77(8), 1457–1492. http://doi.org/10.1007/s11538-015-0092-6<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/26420504<br />
* PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/<br />
* Publisher Full Text (HTML): https://link.springer.com/article/10.1007/s11538-015-0092-6<br />
* Publisher Full Text (PDF): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/pdf/11538_2015_Article_92.pdf<br />
* Copyright: The Author(s) 2015. Open Access: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.<br />
* Publisher: Bulletin of Mathematical Biology(scientific society)<br />
* Availability: Online<br />
* Did LMU pay a fee for this article: No<br />
* Data: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/bin/11538_2015_92_MOESM1_ESM.zip<br />
<br />
<br />
Ando, A., Nakamura, T., Murata, Y., Takagi, H. and Shima, J. (2007), Identification and classification of genes required for tolerance to freeze–thaw stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains. FEMS Yeast Research, 7: 244–253. doi:10.1111/j.1567-1364.2006.00162.x<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/16989656<br />
* PubMed Central: N/A<br />
* Publisher Full Text (HTML): https://academic.oup.com/femsyr/article/7/2/244/616825?searchresult=1<br />
* Publisher Full Text (PDF): http://onlinelibrary.wiley.com/doi/10.1111/j.1567-1364.2006.00162.x/epdf<br />
* Copyright: Copyright © 2007, Oxford University Press; Open Access after time has elapsed: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. You must ask permission from the publisher to use the article.<br />
* Publisher: Published by Oxford University Press(respected open access organization)<br />
* Availability: Online and in print<br />
* Did LMU pay a fee for this article: No<br />
* Data: I couldn't find any supplementary data other than the data provided in the article.<br />
<br />
<br />
<br />
<br />
==Journal Club Presentations==<br />
===Powerpoint Slides and Respective Articles===<br />
[[File:Data Driven Design.zip]]<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
<br><br />
[[Media:MaryHaydenWeek12JournalClubPresentation.pptx ]]<br />
*Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
<br />
==Executive Summaries==<br />
<br />
<br />
===[[Week 11]] Executive Summaries===<br />
====Arash====<br />
This week, I worked on researching the given article and the development terms within it as well as prepare a presentation on the article. I also began thinking of some page layout ideas with Nicole to prepare to implement in the coming weeks. All of this information could be found on my Week 11 page: [[ArashLari_Week_11|ArashLari Week 11]].<br />
[[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 02:09, 14 November 2017 (PST)<br />
====Mary====<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 23:03, 13 November 2017 (PST)<br />
<br />
====Nicole====<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The presentation gives an overview of our individual journals and what we each learned. You can access more information on what I did this week here: [[Nicolekalcic Week 11]].<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 01:27, 14 November 2017 (PST)<br />
====Hayden====<br />
This week I created part of the annotated bibliography we will be using for our final project. I conducted searched for "yeast cold shock microarray" articles and found which two articles I was going to use for the bibliography. The majority of the time this week was spent on finding the information needed for the annotated bibliography which can be found below on this page. More detailed information can be found on my [[hhinsch Week 11]] page. This week I became proficient in finding reliable article to use for our final project. This week we also created the group's template and wiki page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:43, 13 November 2017 (PST)<br />
<br />
===[[Week 12]] Executive Summaries===<br />
====Arash====<br />
This week was rather light compared to the previous week. We mostly set up the files on our personal computers, which was convenient because as a computer science major I already had most of the necessary files. Nicole and I talked about some preliminary designs and set up a rough schedule that we'll make concrete after the break. This can be found on my week 12 page [[ArashLari Week 12] | Arash Lari Week 12]. [[User:ArashLari|ArashLari]] ([[User talk:ArashLari|talk]]) 20:43, 20 November 2017 (PST)<br />
<br />
====Mary====<br />
This week I read an article about an experiment done on wine and lab strains of yeast in different temperatures. The experimenters used DNA microarrays to determine which genes were affected by the change in temperatures and which were different based on the different strains of yeast. While reading the article, I can across words I had never seen before, so I also found and recorded the definitions of these words. I then made an outline of the article, to use as a basis for my presentation with our project manager, [[user:hhinsch| Hayden]]. All of this is on my [[mbalducc Week 12| Week 12]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 19:51, 19 November 2017 (PST)<br />
<br />
====Nicole====<br />
Because Arash and I presented last week, we didn't have a heavy work load this week. Arash explained a lot of technical things to me, and we completed the first coding milestones and talked about design possibilities. I officially have a GitHub (nicolekal). I also downloaded the software I needed but didn't have onto my laptop. A full update can be found on: [[Nicolekalcic Week 12] | Nicole Kalcic Week 12]. [[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 23:45, 20 November 2017 (PST)<br />
<br />
====Hayden====<br />
This week I worked with Mary specifically in order to complete our journal club presentation. As a group we worked together to make corrections to the [[Page Desiigner]] group page in order to complete the deliverables for this week. Mary and I created a schedule for our group along with helpful links. As a class we decided we will be using WhatsApp to communicate. I spent most of this week outlining the article (it was a pretty difficult read) and defining terms on my [[hhinsch Week 12]] page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 17:42, 20 November 2017 (PST)<br />
<br />
==Team Progress Reflections==<br />
<br />
===[[Week 11]] Team Progress Reflections===<br />
<br />
====Nicole====<br />
# What worked?<br />
#* We all work well in our positions. Arash and I worked together recently, so it was easy to coordinate what we are going to do as coder and designer. Everyone was open to opinions on the page and team name. Also, everyone communicated what they were having trouble finishing. <br />
# What didn't work?<br />
#* Like Mary said, we weren't able to meet in person. We planned out our meetup during class, but Friday ended up being a busy day for everyone. <br />
# What will I do next to fix what didn't work?<br />
#* Next week I will make sure to check in more with my partners. Even if we don't meet up, it is important to make sure everyone is caught up on the assignment and their individual parts. <br />
====Mary====<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
====Hayden====<br />
# What worked?<br />
#*We are all doing well communicating and completing our deliverables as individuals and as a group.<br />
# What didn't work?<br />
#*Everything worked well in regards to the group, but I did have some trouble finding all the information needed to create an annotated bibliography for the articles I used. Google Scholar gave me way too many results, and PubMed did not have a lot of articles that were either free or LMU had paid for.<br />
# What will I do next to fix what didn't work?<br />
#*I will continue to ask questions in class. I also feel more confident about finding useful articles after the completion of this assignment, so it shouldn't be a problem.<br />
[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:44, 13 November 2017 (PST)<br />
<br />
====Arash====<br />
<br />
# What worked?<br />
#*We were good at maintaining our own individual tasks and keeping each other updated via text message.<br />
<br />
# What didn't work?<br />
#*We were unable to schedule time to meet and work effectively. <br />
<br />
# What will I do next to fix what didn't work?<br />
#*Hopefully we will have lighter course loads and more free time for the next assignment, but besides that we will begin working sooner and try to work in person more than digitally.<br />
<br />
<br />
===[[Week 12]] Team Progress Reflections===<br />
<br />
====Arash====<br />
# What worked?<br />
#*I think we all got a better grasp of the assignment and time management for the assignment. We have a clear idea where we're headed.<br />
# What didn't work?<br />
#* I wish we had more time to dedicate to this class, as often our schedules don't line up. <br />
# What will I do next to fix what didn't work?<br />
#*We'll try to be more proactive about all our tasks so they don't pile up. I'm planning on starting some work during the thanksgiving break to lighten the load afterwards.<br />
====Mary====<br />
# What worked?<br />
#*I think that this week I felt more comfortable with the project as a whole. I also liked presenting after the other guilds because I got to see their presentations to get a better idea of what we should include in ours.<br />
# What didn't work?<br />
#*I wish that I had more time to read the article and make the presentation. I felt that I didn't understand the article completely, and had to read it a few times to be happy with the way that I understood it and formed my outline of it. Because of this, I couldn't spend as much time as I would've wanted on making the presentation.<br />
# What will I do next to fix what didn't work?<br />
#*I will try to spend more time on the entire project, instead of just one part.<br />
<br />
====Nicole====<br />
<br />
====Hayden====<br />
#What Worked?<br />
#*This week we were a little more prepared to work together and complete the deliverables. As time goes by the end goal is becoming more apparent.<br />
#What didn't work?<br />
#*I spent a lot of time reading the article multiple times and it is still a bit confusing to me. A lot of the vocabulary wasn't even found in the dictionaries we provided and a lot of the information needed a lot of background knowledge to comprehend.<br />
#What will I do next week to fix what didn't work?<br />
#*Next week I will try and do the bulk of the assignment earlier in the week rather than on the weekend, so I may have more time to understand the material.[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 21:09, 20 November 2017 (PST)<br />
<br />
<br />
{{Pagedesiigner}}</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_12&diff=5041
Nicolekalcic Week 12
2017-11-21T07:41:11Z
<p>Nicolekalcic: fixed link</p>
<hr />
<div>==Electronic Journal==<br />
This week, Arash and I worked on [[Coder]] Milestones 0-4. As [[User: ArashLari|Arash]] states on his assignment page, "We set up all the necessary files on our computers as according to milestones 0-3". We talked about some designs for the website, and decided to finish them over the thanksgiving break. I will be sending him sketches, and he will help me with any coding questions/GitHub questions that I have.<br />
<br />
'''Milestone 0'''<br />
#Our [[Week 11]] journal club presentation. The powerpoint can be found here: [[File: Data Driven Design.zip | Arash and Nicole's presentation]]<br />
<br />
'''Milestone 1'''<br />
#This portion required our individual computers had the correct software to complete the project.<br />
#Arash helped me solve the software onto my computer. <br />
* Node.js 8.4.0 <br />
* Code-savvy editor (Atom)<br />
* Web browser with developer tools (Chrome)<br />
* '''git''' version control software<br />
* '''curl''' command<br />
<br />
'''Milestone 2'''<br />
#This portion required us to fork the open source [https://github.com/dondi/GRNsight GRNsight project]. (Arash completed this, and then explained it to me)<br />
#I created a GItHub account, as I did not previously have one. (My user is nicolekal)<br />
#Blair added me to the coder group.<br />
#The fork Arash created is called page-design.<br />
#The fork is currently under Arash's GitHub account: arashlari.<br />
<br />
'''Milestone 3'''<br />
#For this part of the assignment, we needed to download the project code from GitHub.<br />
#We followed these instructions: [https://github.com/dondi/GRNsight/wiki/Running-the-Applications instructions in the GRNsight wiki]<br />
# We performed "git clone" to acquire the files, "cd" into the appropriate folder on our personal computers, and "git checkout" to the branch we were assigned to.<br />
<br />
'''Milestone 4'''<br />
#We looked at what the most liked pages were from the previous assignment and read over everyone's explanations. I briefly sketched out ideas and talked about color with Arash, but we will be completing this over Thanksgiving break.<br />
#I focused on the aesthetic elements, because I am a Studio Arts major. [[User: ArashLari|Arash]] states on his page that he, "focused on how I would use bootstrap to implement everything while still relaying the relevant technical information to Nicole". <br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 23:21, 20 November 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 12. Retrieved November 20, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_12<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_12&diff=5037
Nicolekalcic Week 12
2017-11-21T07:40:27Z
<p>Nicolekalcic: added to journal entry</p>
<hr />
<div>==Electronic Journal==<br />
This week, Arash and I worked on [[Coder]] Milestones 0-4. As [[User: ArashLari|Arash]] states on his assignment page, "We set up all the necessary files on our computers as according to milestones 0-3". We talked about some designs for the website, and decided to finish them over the thanksgiving break. I will be sending him sketches, and he will help me with any coding questions/GitHub questions that I have.<br />
<br />
'''Milestone 0'''<br />
#Our [[Week 11]] journal club presentation. The powerpoint can be found here: [[File: Data Driven Design.zip | Arash and Nicole's presentaton]<br />
<br />
'''Milestone 1'''<br />
#This portion required our individual computers had the correct software to complete the project.<br />
#Arash helped me solve the software onto my computer. <br />
* Node.js 8.4.0 <br />
* Code-savvy editor (Atom)<br />
* Web browser with developer tools (Chrome)<br />
* '''git''' version control software<br />
* '''curl''' command<br />
<br />
'''Milestone 2'''<br />
#This portion required us to fork the open source [https://github.com/dondi/GRNsight GRNsight project]. (Arash completed this, and then explained it to me)<br />
#I created a GItHub account, as I did not previously have one. (My user is nicolekal)<br />
#Blair added me to the coder group.<br />
#The fork Arash created is called page-design.<br />
#The fork is currently under Arash's GitHub account: arashlari.<br />
<br />
'''Milestone 3'''<br />
#For this part of the assignment, we needed to download the project code from GitHub.<br />
#We followed these instructions: [https://github.com/dondi/GRNsight/wiki/Running-the-Applications instructions in the GRNsight wiki]<br />
# We performed "git clone" to acquire the files, "cd" into the appropriate folder on our personal computers, and "git checkout" to the branch we were assigned to.<br />
<br />
'''Milestone 4'''<br />
#We looked at what the most liked pages were from the previous assignment and read over everyone's explanations. I briefly sketched out ideas and talked about color with Arash, but we will be completing this over Thanksgiving break.<br />
#I focused on the aesthetic elements, because I am a Studio Arts major. [[User: ArashLari|Arash]] states on his page that he, "focused on how I would use bootstrap to implement everything while still relaying the relevant technical information to Nicole". <br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 23:21, 20 November 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 12. Retrieved November 20, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_12<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_12&diff=5018
Nicolekalcic Week 12
2017-11-21T07:21:21Z
<p>Nicolekalcic: formatted page</p>
<hr />
<div><br />
==Electronic Journal==<br />
<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 23:21, 20 November 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 12. Retrieved November 20, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_12<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Template:Nicolekalcic&diff=5017
Template:Nicolekalcic
2017-11-21T07:20:01Z
<p>Nicolekalcic: added week 12</p>
<hr />
<div>[[User:Nicolekalcic|Nicole Kalcic's Homepage]]<br />
<br />
<br />
'''Assignment:''' [[Week 1]] <br />
'''Shared Journal:''' [[ Class Journal Week 1]]<br />
'''Individual Journal:''' [[User:Nicolekalcic|User Page]]<br />
<br />
'''Assignment:''' [[Week 2]]<br />
'''Shared Journal:''' [[Class Journal Week 2]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 2]]<br />
<br />
'''Assignment:''' [[Week 3]]<br />
'''Shared Journal:''' [[Class Journal Week 3]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 3]]<br />
<br />
'''Assignment:''' [[Week 4]]<br />
'''Shared Journal:''' [[Class Journal Week 4]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 4]]<br />
<br />
'''Assignment:''' [[Week 5]]<br />
'''Shared Journal:''' [[Class Journal Week 5]]<br />
'''Individual Journal:''' [[The Monarch Initiative|Nicolekalcic Week 5]]<br />
<br />
'''Assignment:''' [[Week 6]]<br />
'''Shared Journal:''' [[Class Journal Week 6]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 6]]<br />
<br />
'''Assignment:''' [[Week 7]]<br />
'''Shared Journal:''' [[Class Journal Week 7]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 7]]<br />
<br />
'''Assignment:''' [[Week 8]]<br />
'''Shared Journal:''' [[Class Journal Week 8]]<br />
'''Individual Journal:''' [[NicoleKalcic Week 8]]<br />
<br />
'''Assignment:''' [[Week 9]]<br />
'''Shared Journal:''' [[Class Journal Week 9]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 9]]<br />
<br />
'''Assignment:''' [[Week 10]]<br />
'''Shared Journal:''' [[Class Journal Week 10]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 10]]<br />
<br />
'''Assignment:''' [[Week 11]]<br />
'''Shared Journal:''' [[Class Journal Week 11]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 11]]<br />
<br />
'''Assignment:''' [[Week 12]]<br />
'''Shared Journal:''' [[Class Journal Week 12]]<br />
'''Individual Journal:''' [[Nicolekalcic Week 12]]<br />
<br />
[[Category:Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4569
Nicolekalcic Week 11
2017-11-14T21:22:10Z
<p>Nicolekalcic: added ending/* The Data-Driven Design Era in Professional Web Design (Outline) */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#'''Heatmaps''': "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#'''Behavioral Analytics''': "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#'''Passive Tracking''': "Passive tracking describes any kind of under-the-surface recording of user activity. These tools usually solve the challenges of automated collection, aggregation, and analysis all in one" (Liikkanen, 2017). <br />
#'''Assistive Tools''': "[...] will help designers to work more effectively by helping in creative tasks" (Liikkanen, 2017). <br />
#'''Agentive Tools''':' "[...] will delegate design tasks to artificial intelligence and minimize human involvement (Liikkanen, 2017). <br />
#'''User Screen Recordings''': "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#'''A/B tests/Multivariate Tests''': "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#'''Google Optimize''': "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#'''KISSMetrics''': "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#'''IBM TeaLeaf''': "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
==Presentation==<br />
[[File:Data Driven Design.zip]]<br />
<br />
==''The Data-Driven Design Era in Professional Web Design'' (Outline)==<br />
===Foreword===<br />
*Designers have traditionally functioned on intuition and opinion<br />
*New developments in technology have made collecting user activity information easier<br />
*Rise of technology -> evidenced-based design<br />
===Main Message===<br />
*Data driven design will progress by adapting to change, implementing tools that aid the design process, and effectively/maturely addressing ethical questions.<br />
*Data driven design gives designers an effective incentive to approach design research in a hypothesis-driven way. <br />
===Design/Development Practices, Processes, Techniques, Methods, Approaches===<br />
*Data driven design (DDD) is defined in the article as design research done with the use of tools that are automated to perform data collection and analysis<br />
*DDD Process: <br />
**collect data<br />
**aggregate it<br />
**combine it with other data<br />
**analyze it <br />
*Data collection can be separated into two types of solutions: active and passive<br />
**Active or passive solutions?<br />
***Active requires additional user effort in the data collection, thus its cost and issues requires that it is only used in smaller cases<br />
***Passive collection examples: Screen recordings, heat maps, experiment management, and descriptive behavioral analytics<br />
****Screen recordings: <br />
*****simply... full recordings of the user's screen<br />
*****provides detailed view<br />
*****raises privacy and ethical concerns<br />
****Heat maps: <br />
*****help visualize the most frequently clicked on/hovered on spots of a webpage<br />
*****not always clear because there is no context<br />
****Experiment management: <br />
*****two or more designs tested to decipher which features are working <br />
*****developers can easily detect what has failed<br />
*****efficient time wise<br />
****Descriptive behavioral analytics: <br />
*****precursor to all current DDD solutions<br />
*****contextual data related to the visit (i.e. amount of time spent, which pages were clicked on, which elements were clicked on, what order were things clicked on)<br />
*****info is better for business and marketing rather than design<br />
*****Google, Adobe Analytics, KISSMetrics, IBM Tealeaf all offer analytics solutions<br />
====Class Project====<br />
We can now identify that we won't be using passive tools in our group project. We don't have a large enough class or group of people to justify implementing passive tools to test our webpage/receive adequate information. Instead, we will use active data collection. We will go through with this by interacting directly with out classmates and asking for feedback on our work.<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
* Salesforce Pardot. (2017). The ABCs of A/B Testing | Salesforce Pardot. Accessed November 13, 2017, https://www.pardot.com/blog/abcs-ab-testing/ <br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4568
Nicolekalcic Week 11
2017-11-14T21:04:09Z
<p>Nicolekalcic: formatting issue/* Design/Development Practices, Processes, Techniques, Methods, Approaches */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#'''Heatmaps''': "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#'''Behavioral Analytics''': "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#'''Passive Tracking''': "Passive tracking describes any kind of under-the-surface recording of user activity. These tools usually solve the challenges of automated collection, aggregation, and analysis all in one" (Liikkanen, 2017). <br />
#'''Assistive Tools''': "[...] will help designers to work more effectively by helping in creative tasks" (Liikkanen, 2017). <br />
#'''Agentive Tools''':' "[...] will delegate design tasks to artificial intelligence and minimize human involvement (Liikkanen, 2017). <br />
#'''User Screen Recordings''': "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#'''A/B tests/Multivariate Tests''': "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#'''Google Optimize''': "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#'''KISSMetrics''': "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#'''IBM TeaLeaf''': "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
==Presentation==<br />
[[File:Data Driven Design.zip]]<br />
<br />
==''The Data-Driven Design Era in Professional Web Design'' (Outline)==<br />
===Main Message===<br />
*Data driven design will progress by adapting to change, implementing tools that aid the design process, and effectively/maturely addressing ethical questions.<br />
*Data driven design gives designers an effective incentive to approach design research in a hypothesis-driven way. <br />
===Design/Development Practices, Processes, Techniques, Methods, Approaches===<br />
*Data driven design (DDD) is defined in the article as design research done with the use of tools that are automated to perform data collection and analysis<br />
*DDD Process: collect data, aggregate it, combine it with other data, and analyze it <br />
*Data collection can be separated into two types of solutions: active and passive<br />
**Active or passive solutions?<br />
***Active requires additional user effort in the data collection, thus its cost and issues requires that it is only used in smaller cases<br />
***Passive collection examples: Screen recordings, heat maps, experiment management, and descriptive behavioral analytics<br />
****Screen recordings: <br />
*****simply... full recordings of the user's screen<br />
*****provides detailed view<br />
*****raises privacy and ethical concerns<br />
****Heat maps: <br />
*****help visualize the most frequently clicked on/hovered on spots of a webpage<br />
*****not always clear because there is no context<br />
****Experiment management: <br />
*****two or more designs tested to decipher which features are working <br />
*****developers can easily detect what has failed<br />
*****efficient time wise<br />
****Descriptive behavioral analytics: <br />
*****precursor to all current DDD solutions<br />
*****contextual data related to the visit (i.e. amount of time spent, which pages were clicked on, which elements were clicked on, what order were things clicked on)<br />
*****info is better for business and marketing rather than design<br />
*****Google, Adobe Analytics, KISSMetrics, IBM Tealeaf all offer analytics solutions<br />
<br />
===Benefits to Web Design and/or Software Development===<br />
===Significance of Work===<br />
====General====<br />
<br />
<br />
====Project====<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
* Salesforce Pardot. (2017). The ABCs of A/B Testing | Salesforce Pardot. Accessed November 13, 2017, https://www.pardot.com/blog/abcs-ab-testing/ <br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4567
Nicolekalcic Week 11
2017-11-14T21:03:15Z
<p>Nicolekalcic: spacing /* Design/Development Practices, Processes, Techniques, Methods, Approaches */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#'''Heatmaps''': "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#'''Behavioral Analytics''': "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#'''Passive Tracking''': "Passive tracking describes any kind of under-the-surface recording of user activity. These tools usually solve the challenges of automated collection, aggregation, and analysis all in one" (Liikkanen, 2017). <br />
#'''Assistive Tools''': "[...] will help designers to work more effectively by helping in creative tasks" (Liikkanen, 2017). <br />
#'''Agentive Tools''':' "[...] will delegate design tasks to artificial intelligence and minimize human involvement (Liikkanen, 2017). <br />
#'''User Screen Recordings''': "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#'''A/B tests/Multivariate Tests''': "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#'''Google Optimize''': "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#'''KISSMetrics''': "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#'''IBM TeaLeaf''': "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
==Presentation==<br />
[[File:Data Driven Design.zip]]<br />
<br />
==''The Data-Driven Design Era in Professional Web Design'' (Outline)==<br />
===Main Message===<br />
*Data driven design will progress by adapting to change, implementing tools that aid the design process, and effectively/maturely addressing ethical questions.<br />
*Data driven design gives designers an effective incentive to approach design research in a hypothesis-driven way. <br />
===Design/Development Practices, Processes, Techniques, Methods, Approaches===<br />
*Data driven design (DDD) is defined in the article as design research done with the use of tools that are automated to perform data collection and analysis<br />
*DDD Process: collect data, aggregate it, combine it with other data, and analyze it <br />
*Data collection can be separated into two types of solutions: active and passive<br />
**Active or passive solutions?<br />
***Active requires additional user effort in the data collection, thus its cost and issues requires that it is only used in smaller cases<br />
***Passive collection examples: Screen recordings, heat maps, experiment management, and descriptive behavioral analytics<br />
****Screen recordings: <br />
*****simply... full recordings of the user's screen<br />
*****provides detailed view<br />
*****raises privacy and ethical concerns<br />
****Heat maps: <br />
*****help visualize the most frequently clicked on/hovered on spots of a webpage<br />
*****not always clear because there is no context<br />
****Experiment management: <br />
*****two or more designs tested to decipher which features are working <br />
*****developers can easily detect what has failed<br />
*****efficient time wise<br />
****Descriptive behavioral analytics: <br />
*****precursor to all current DDD solutions<br />
*****contextual data related to the visit (i.e. amount of time spent, which pages were clicked on, which elements were clicked on, what order were things clicked on)<br />
*****info is better for business and marketing rather than design<br />
*****Google/Adobe Analytics/KISSMetrics/IBM Tealeaf all offer analytics solutions<br />
<br />
===Benefits to Web Design and/or Software Development===<br />
===Significance of Work===<br />
====General====<br />
<br />
<br />
====Project====<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
* Salesforce Pardot. (2017). The ABCs of A/B Testing | Salesforce Pardot. Accessed November 13, 2017, https://www.pardot.com/blog/abcs-ab-testing/ <br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4565
Nicolekalcic Week 11
2017-11-14T19:47:30Z
<p>Nicolekalcic: </p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#'''Heatmaps''': "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#'''Behavioral Analytics''': "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#'''Passive Tracking''': "Passive tracking describes any kind of under-the-surface recording of user activity. These tools usually solve the challenges of automated collection, aggregation, and analysis all in one" (Liikkanen, 2017). <br />
#'''Assistive Tools''': "[...] will help designers to work more effectively by helping in creative tasks" (Liikkanen, 2017). <br />
#'''Agentive Tools''':' "[...] will delegate design tasks to artificial intelligence and minimize human involvement (Liikkanen, 2017). <br />
#'''User Screen Recordings''': "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#'''A/B tests/Multivariate Tests''': "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#'''Google Optimize''': "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#'''KISSMetrics''': "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#'''IBM TeaLeaf''': "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
==Presentation==<br />
[[File:Data Driven Design.zip]]<br />
<br />
==''The Data-Driven Design Era in Professional Web Design'' (Outline)==<br />
===Main Message===<br />
*Data driven design will progress by adapting to change, implementing tools that aid the design process, and effectively/maturely addressing ethical questions.<br />
*Data driven design gives designers an effective incentive to approach design research in a hypothesis-driven way. <br />
===Design/Development Practices, Processes, Techniques, Methods, Approaches===<br />
*Data driven design (DDD) is defined in the article as design research done with the use of tools that are automated to perform data collection and analysis<br />
*DDD Process: collect data, aggregate it, combine it with other data, and analyze it <br />
*Data collection can be separated into two types of solutions: active and passive<br />
**Active or passive solutions?<br />
***Active requires additional user effort in the data collection, thus its cost and issues requires that it is only used in smaller cases<br />
***Passive collection examples: Screen recordings, heat maps, experiment management, and descriptive behavioral analytics<br />
****#Screen recordings: simply full recordings of the user's screen, provides detailed view, raises privacy and ethical concerns<br />
****#Heat maps: help visualize the most frequently clicked on/hovered on spots of a webpage, not always clear because there is no context<br />
****#Experiment management: two or more designs tested to decipher which features are working, developers can easily detect what has failed, efficient time wise<br />
****#Descriptive behavioral analytics: precursor to all current DDD solutions, contextual data related to the visit (i.e. amount of time spent, which pages were clicked on, which elements were clicked on, what order were things clicked on), info is better for business and marketing rather than design, Google/Adobe Analytics/KISSMetrics/IBM Tealeaf all offer analytics solutions<br />
===Benefits to Web Design and/or Software Development===<br />
===Significance of Work===<br />
====General====<br />
<br />
<br />
====Project====<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
* Salesforce Pardot. (2017). The ABCs of A/B Testing | Salesforce Pardot. Accessed November 13, 2017, https://www.pardot.com/blog/abcs-ab-testing/ <br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4564
Nicolekalcic Week 11
2017-11-14T19:45:29Z
<p>Nicolekalcic: edited outline /* The Data-Driven Design Era in Professional Web Design (Outline) */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#'''Heatmaps''': "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#'''Behavioral Analytics''': "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#'''Passive Tracking''': "Passive tracking describes any kind of under-the-surface recording of user activity. These tools usually solve the challenges of automated collection, aggregation, and analysis all in one" (Liikkanen, 2017). <br />
#'''Assistive Tools''': "[...] will help designers to work more effectively by helping in creative tasks" (Liikkanen, 2017). <br />
#'''Agentive Tools''':' "[...] will delegate design tasks to artificial intelligence and minimize human involvement (Liikkanen, 2017). <br />
#'''User Screen Recordings''': "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#'''A/B tests/Multivariate Tests''': "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#'''Google Optimize''': "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#'''KISSMetrics''': "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#'''IBM TeaLeaf''': "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
==''The Data-Driven Design Era in Professional Web Design'' (Outline)==<br />
===Main Message===<br />
*Data driven design will progress by adapting to change, implementing tools that aid the design process, and effectively/maturely addressing ethical questions.<br />
*Data driven design gives designers an effective incentive to approach design research in a hypothesis-driven way. <br />
===Design/Development Practices, Processes, Techniques, Methods, Approaches===<br />
*Data driven design (DDD) is defined in the article as design research done with the use of tools that are automated to perform data collection and analysis<br />
*DDD Process: collect data, aggregate it, combine it with other data, and analyze it <br />
*Data collection can be separated into two types of solutions: active and passive<br />
**Active or passive solutions?<br />
***Active requires additional user effort in the data collection, thus its cost and issues requires that it is only used in smaller cases<br />
***Passive collection examples: Screen recordings, heat maps, experiment management, and descriptive behavioral analytics<br />
****#Screen recordings: simply full recordings of the user's screen, provides detailed view, raises privacy and ethical concerns<br />
****#Heat maps: help visualize the most frequently clicked on/hovered on spots of a webpage, not always clear because there is no context<br />
****#Experiment management: two or more designs tested to decipher which features are working, developers can easily detect what has failed, efficient time wise<br />
****#Descriptive behavioral analytics: precursor to all current DDD solutions, contextual data related to the visit (i.e. amount of time spent, which pages were clicked on, which elements were clicked on, what order were things clicked on), info is better for business and marketing rather than design, Google/Adobe Analytics/KISSMetrics/IBM Tealeaf all offer analytics solutions<br />
===Benefits to Web Design and/or Software Development===<br />
===Significance of Work===<br />
====General====<br />
<br />
<br />
====Project====<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
* Salesforce Pardot. (2017). The ABCs of A/B Testing | Salesforce Pardot. Accessed November 13, 2017, https://www.pardot.com/blog/abcs-ab-testing/ <br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4554
Nicolekalcic Week 11
2017-11-14T09:52:10Z
<p>Nicolekalcic: edited formatting for outline</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#'''Heatmaps''': "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#'''Behavioral Analytics''': "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#'''Passive Tracking''': "Passive tracking describes any kind of under-the-surface recording of user activity. These tools usually solve the challenges of automated collection, aggregation, and analysis all in one" (Liikkanen, 2017). <br />
#'''Assistive Tools''': "[...] will help designers to work more effectively by helping in creative tasks" (Liikkanen, 2017). <br />
#'''Agentive Tools''':' "[...] will delegate design tasks to artificial intelligence and minimize human involvement (Liikkanen, 2017). <br />
#'''User Screen Recordings''': "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#'''A/B tests/Multivariate Tests''': "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#'''Google Optimize''': "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#'''KISSMetrics''': "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#'''IBM TeaLeaf''': "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
==''The Data-Driven Design Era in Professional Web Design'' (Outline)==<br />
===Main Message===<br />
===Summarized Points===<br />
===Design/Development Practices, Processes, Techniques, Methods, Approaches===<br />
===Benefits to Web Design and/or Software Development===<br />
===Significance of Work===<br />
====General====<br />
<br />
<br />
====In Terms of Project====<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
* Salesforce Pardot. (2017). The ABCs of A/B Testing | Salesforce Pardot. Accessed November 13, 2017, https://www.pardot.com/blog/abcs-ab-testing/ <br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4550
Nicolekalcic Week 11
2017-11-14T09:37:54Z
<p>Nicolekalcic: bolded words/* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#'''Heatmaps''': "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#'''Behavioral Analytics''': "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#'''Passive Tracking''': "Passive tracking describes any kind of under-the-surface recording of user activity. These tools usually solve the challenges of automated collection, aggregation, and analysis all in one" (Liikkanen, 2017). <br />
#'''Assistive Tools''': "[...] will help designers to work more effectively by helping in creative tasks" (Liikkanen, 2017). <br />
#'''Agentive Tools''':' "[...] will delegate design tasks to artificial intelligence and minimize human involvement (Liikkanen, 2017). <br />
#'''User Screen Recordings''': "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#'''ABX/Multivariate Tests''': "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#'''Google Optimize''': "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#'''KISSMetrics''': "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#'''IBM TeaLeaf''': "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
* Salesforce Pardot. (2017). The ABCs of A/B Testing | Salesforce Pardot. Accessed November 13, 2017, https://www.pardot.com/blog/abcs-ab-testing/ <br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4549
Nicolekalcic Week 11
2017-11-14T09:32:08Z
<p>Nicolekalcic: finished definitions /* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking: "Passive tracking describes any kind of under-the-surface recording of user activity. These tools usually solve the challenges of automated collection, aggregation, and analysis all in one" (Liikkanen, 2017). <br />
#Assistive Tools: "[...] will help designers to work more effectively by helping in creative tasks" (Liikkanen, 2017). <br />
#Agentive Tools:' "[...] will delegate design tasks to artificial intelligence and minimize human involvement (Liikkanen, 2017). <br />
#User Screen Recordings: "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#ABX/Multivariate Tests: "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#Google Optimize: "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf: "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
* Salesforce Pardot. (2017). The ABCs of A/B Testing | Salesforce Pardot. Accessed November 13, 2017, https://www.pardot.com/blog/abcs-ab-testing/ <br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=4547
Page Desiigner
2017-11-14T09:27:09Z
<p>Nicolekalcic: forgot to add signature to NK /* Week 11 Executive Summaries */</p>
<hr />
<div>[[Category:Assignment]]<br />
[[Category:Group Projects]]<br />
<br />
==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
<br><br />
Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
<br><br />
Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
<br><br />
Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
<br />
<br />
==[[Week 11]] Executive Summaries==<br />
===Arash===<br />
===Mary===<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
<br />
[[User:Mbalducc|Mbalducc]] ([[User talk:Mbalducc|talk]]) 23:03, 13 November 2017 (PST)<br />
<br />
===Nicole===<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The presentation gives an overview of our individual journals and what we each learned. You can access more information on what I did this week here: [[Nicolekalcic Week 11]].<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 01:27, 14 November 2017 (PST)<br />
===Hayden===<br />
This week I created part of the annotated bibliography we will be using for our final project. I conducted searched for "yeast cold shock microarray" articles and found which two articles I was going to use for the bibliography. The majority of the time this week was spent on finding the information needed for the annotated bibliography which can be found below on this page. More detailed information can be found on my [[hhinsch Week 11]] page. This week I became proficient in finding reliable article to use for our final project. This week we also created the group's template and wiki page. [[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:43, 13 November 2017 (PST)<br />
<br />
==[[Week 11]] Team Progress Reflection==<br />
===Nicole===<br />
# What worked?<br />
#* We all work well in our positions. Arash and I worked together recently, so it was easy to coordinate what we are going to do as coder and designer. Everyone was open to opinions on the page and team name. Also, everyone communicated what they were having trouble finishing. <br />
# What didn't work?<br />
#* Like Mary said, we weren't able to meet in person. We planned out our meetup during class, but Friday ended up being a busy day for everyone. <br />
# What will I do next to fix what didn't work?<br />
#* Next week I will make sure to check in more with my partners. Even if we don't meet up, it is important to make sure everyone is caught up on the assignment and their individual parts. <br />
===Mary===<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
===Hayden===<br />
# What worked?<br />
*We are all doing well communicating and completing our deliverables as individuals and as a group.<br />
# What didn't work?<br />
*Everything worked well in regards to the group, but I did have some trouble finding all the information needed to create an annotated bibliography for the articles I used. Google Scholar gave me way too many results, and PubMed did not have a lot of articles that were either free or LMU had paid for.<br />
# What will I do next to fix what didn't work?<br />
*I will continue to ask questions in class. I also feel more confident about finding useful articles after the completion of this assignment, so it shouldn't be a problem.<br />
[[User:Hhinsch|Hhinsch]] ([[User talk:Hhinsch|talk]]) 22:44, 13 November 2017 (PST)<br />
<br />
===Arash===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
<br />
==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*The publisher is American Society for Microbiology.<br />
**This is a scientific society.<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
<br />
Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*The publisher is Elsevier.<br />
**This is a for-profit publisher<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
===Hayden's Contribution===<br />
<br />
Dahlquist, K. D., Fitzpatrick, B. G., Camacho, E. T., Entzminger, S. D., & Wanner, N. C. (2015). Parameter Estimation for Gene Regulatory Networks from Microarray Data: Cold Shock Response in Saccharomyces cerevisiae. Bulletin of Mathematical Biology, 77(8), 1457–1492. http://doi.org/10.1007/s11538-015-0092-6<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/26420504<br />
* PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/<br />
* Publisher Full Text (HTML): https://link.springer.com/article/10.1007/s11538-015-0092-6<br />
* Publisher Full Text (PDF): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/pdf/11538_2015_Article_92.pdf<br />
* Copyright: The Author(s) 2015. Open Access: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.<br />
* Publisher: Bulletin of Mathematical Biology(scientific society)<br />
* Availability: Online<br />
* Did LMU pay a fee for this article: No<br />
* Data: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636536/bin/11538_2015_92_MOESM1_ESM.zip<br />
<br />
<br />
Ando, A., Nakamura, T., Murata, Y., Takagi, H. and Shima, J. (2007), Identification and classification of genes required for tolerance to freeze–thaw stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains. FEMS Yeast Research, 7: 244–253. doi:10.1111/j.1567-1364.2006.00162.x<br />
* PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/16989656<br />
* PubMed Central: N/A<br />
* Publisher Full Text (HTML): https://academic.oup.com/femsyr/article/7/2/244/616825?searchresult=1<br />
* Publisher Full Text (PDF): http://onlinelibrary.wiley.com/doi/10.1111/j.1567-1364.2006.00162.x/epdf<br />
* Copyright: Copyright © 2007, Oxford University Press; Open Access after time has elapsed: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. You must ask permission from the publisher to use the article.<br />
* Publisher: Published by Oxford University Press(respected open access organization)<br />
* Availability: Online and in print<br />
* Did LMU pay a fee for this article: No<br />
* Data: I couldn't find any supplementary data other than the data provided in the article.<br />
{{Pagedesiigner}}</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4467
Nicolekalcic Week 11
2017-11-14T06:11:38Z
<p>Nicolekalcic: edited refereneces</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings: "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#ABX/Multivariate Tests: "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#Google Optimize: "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf: "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
* Salesforce Pardot. (2017). The ABCs of A/B Testing | Salesforce Pardot. Accessed November 13, 2017, https://www.pardot.com/blog/abcs-ab-testing/ <br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4465
Nicolekalcic Week 11
2017-11-14T06:08:44Z
<p>Nicolekalcic: abx testing/* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings: "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#ABX/Multivariate Tests: "Defined as a controlled experiment with two variants, A and B. It is a form of statistical hypothesis testing or 'two-sample hypothesis testing' as used in the field of statistics. In online settings, such as web design (especially user experience design), the goal of [ABX] testing is to identify changes to web pages that increase or maximize an outcome of interest" (Salesforce Pardot, 2017).<br />
#Google Optimize: "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf: "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4464
Nicolekalcic Week 11
2017-11-14T06:04:07Z
<p>Nicolekalcic: added google /* References */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings: "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#ABX/Multivariate Tests:<br />
#Google Optimize: "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf: "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Google.com. (2017). Website, AB Testing & Personalization Solutions - Google Optimize – Google. Accessed November 13, 2017, at https://www.google.com/analytics/optimize/ <br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4463
Nicolekalcic Week 11
2017-11-14T06:03:04Z
<p>Nicolekalcic: added optimize/* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings: "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#ABX/Multivariate Tests:<br />
#Google Optimize: "Google Optimize offers AB testing, website testing & personalization tools for small & large enterprises to help deliver engaging customer experiences" (Google, 2017)<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf: "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (IBM, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4462
Nicolekalcic Week 11
2017-11-14T05:58:47Z
<p>Nicolekalcic: edited spacing /* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings: "Remote usability tests pioneered the capture of user interactions. This first happened in real time, when the technology simply connected one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf: "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (Ibm.com, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4461
Nicolekalcic Week 11
2017-11-14T05:57:46Z
<p>Nicolekalcic: added user screen recordings /* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings: "Remote usability tests pioneered the capture of user interactions. This first happened in real time (i.e., synchronously), when the technology simply connected<br />
one screen with another. But with screen recordings it has evolved so that the user sessions—with views, clicks, and all—can be recorded and stored as videos for asynchronous viewing later on. Currently, services such as WhatUsersDo, Crazy Egg, and ClickTale offer this type of functionality" (Liikkanen, 2017). <br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf: "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (Ibm.com, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=4456
Page Desiigner
2017-11-14T05:53:46Z
<p>Nicolekalcic: added Nicole's responses/* Week 11 Team Progress Reflection */</p>
<hr />
<div>[[Category:Assignment]]<br />
[[Category:Group Projects]]<br />
<br />
==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
<br><br />
Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
<br><br />
Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
<br><br />
Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
<br />
<br />
==[[Week 11]] Executive Summaries==<br />
===Arash===<br />
===Mary===<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
<br />
===Nicole===<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The presentation gives an overview of our individual journals and what we each learned. You can access more information on what I did this week here: [[Nicolekalcic Week 11]].<br />
<br />
===Hayden===<br />
<br />
==[[Week 11]] Team Progress Reflection==<br />
===Nicole===<br />
# What worked?<br />
#* We all work well in our positions. Arash and I worked together recently, so it was easy to coordinate what we are going to do as coder and designer. Everyone was open to opinions on the page and team name. Also, everyone communicated what they were having trouble finishing. <br />
# What didn't work?<br />
#* Like Mary said, we weren't able to meet in person. We planned out our meetup during class, but Friday ended up being a busy day for everyone. <br />
# What will I do next to fix what didn't work?<br />
#* Next week I will make sure to check in more with my partners. Even if we don't meet up, it is important to make sure everyone is caught up on the assignment and their individual parts. <br />
===Mary===<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
===Hayden===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
===Arash===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
<br />
==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*The publisher is American Society for Microbiology.<br />
**This is a scientific society.<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
<br />
Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*The publisher is Elsevier.<br />
**This is a for-profit publisher<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
<br />
{{Pagedesiigner}}</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=4454
Page Desiigner
2017-11-14T05:50:15Z
<p>Nicolekalcic: edited link /* Nicole */</p>
<hr />
<div>[[Category:Assignment]]<br />
[[Category:Group Projects]]<br />
<br />
==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
<br><br />
Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
<br><br />
Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
<br><br />
Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
<br />
<br />
==[[Week 11]] Executive Summaries==<br />
===Arash===<br />
===Mary===<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
<br />
===Nicole===<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The presentation gives an overview of our individual journals and what we each learned. You can access more information on what I did this week here: [[Nicolekalcic Week 11]].<br />
<br />
===Hayden===<br />
<br />
==[[Week 11]] Team Progress Reflection==<br />
===Nicole===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
===Mary===<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
===Hayden===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
===Arash===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
<br />
==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*The publisher is American Society for Microbiology.<br />
**This is a scientific society.<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
<br />
Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*The publisher is Elsevier.<br />
**This is a for-profit publisher<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
<br />
{{Pagedesiigner}}</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=4453
Page Desiigner
2017-11-14T05:49:25Z
<p>Nicolekalcic: edited summary /* Nicole */</p>
<hr />
<div>[[Category:Assignment]]<br />
[[Category:Group Projects]]<br />
<br />
==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
<br><br />
Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
<br><br />
Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
<br><br />
Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
<br />
<br />
==[[Week 11]] Executive Summaries==<br />
===Arash===<br />
===Mary===<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
<br />
===Nicole===<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The presentation gives an overview of our individual journals and what we each learned. You can access more information on what I did this week here: [[NicoleKalcic Week 11]].<br />
<br />
===Hayden===<br />
<br />
==[[Week 11]] Team Progress Reflection==<br />
===Nicole===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
===Mary===<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
===Hayden===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
===Arash===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
<br />
==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*The publisher is American Society for Microbiology.<br />
**This is a scientific society.<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
<br />
Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*The publisher is Elsevier.<br />
**This is a for-profit publisher<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
<br />
{{Pagedesiigner}}</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Page_Desiigner&diff=4451
Page Desiigner
2017-11-14T05:47:33Z
<p>Nicolekalcic: added my summary /* Nicole */</p>
<hr />
<div>[[Category:Assignment]]<br />
[[Category:Group Projects]]<br />
<br />
==Page Design Team Members==<br />
Coder: [[User:ArashLari|Arash Lari]]<!--Replicated from home page--><br />
<br><br />
Project Manager/ Quality Assurance: [[User:hhinsch|Hayden Hinsch]]<br />
<br><br />
Data Analyst: [[User:Mbalducc|Mary Balducci]]<br />
<br><br />
Designer: [[User:Nicolekalcic|Nicole Kalcic]]<br />
<br />
<br />
==[[Week 11]] Executive Summaries==<br />
===Arash===<br />
===Mary===<br />
This week, I worked on creating an annotated bibliography. The articles I found were primary sources about experiments done involving cold shock on yeast, and the use of microarrays to show results. I used multiple databases to find these articles, and while doing so I learned what key words got me the results closest to what I wanted. While writing the annotated bibliography, I also learned more about the articles, such as when they were written, who published them, what kind of publisher they are, and other information. All of this is recorded in my [[mbalducc Week 11| Week 11]] page.<br />
<br />
===Nicole===<br />
This past week, I read the article ''The Data-Driven Design Era in Professional Web Design'' by L.A. Liikkanen. This allowed me to complete my individual journal: an informative outline of the article and list of ten definitions. Arash and I worked together to complete a 15 minute presentation that we are going to give on Tuesday. The paper gives an overview of our individual journals and what we learned.<br />
<br />
===Hayden===<br />
<br />
==[[Week 11]] Team Progress Reflection==<br />
===Nicole===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
===Mary===<br />
# What worked?<br />
#*I think as a team, we did a good job communicating and figuring out what needed to be done, and who would do each part.<br />
# What didn't work?<br />
#*We did not meet up outside of class. We had planned to, but we all ended up having conflicts so we couldn't meet.<br />
# What will I do next to fix what didn't work?<br />
#*I think this can be fixed just by making sure we all communicate in other ways, which is what we did. Through text messages we were able to talk about the assignment and help each other.<br />
===Hayden===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
===Arash===<br />
# What worked?<br />
# What didn't work?<br />
# What will I do next to fix what didn't work?<br />
<br />
==Annotated Bibliography==<br />
===Mary's contribution:===<br />
Pizzaro, Jewett, Nielson, Agosin. (2008) Growth Temperature Exerts Differential Physiological and Transcriptional Responses in Laboratory and Wine Strains of Saccharomyces Cerevisiae. "Applied and Environmental Microbiology", 74, 6358-6368, doi:10.1128/AEM.00602-08<br />
*PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/18723660<br />
*PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/<br />
*PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570279/pdf/0602-08.pdf<br />
*Copyright: 2008 American Society for Microbiology. It is open access.<br />
*The publisher is American Society for Microbiology.<br />
**This is a scientific society.<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
<br />
Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. ''Cryobiology'', 46, doi: 10.1016/S0011-2240(03)00028-2<br />
*PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212<br />
*PubMed Central: <br />
*HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub<br />
*PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164<br />
*Copyright 2003 Elsevier Science (USA). It is open access.<br />
*The publisher is Elsevier.<br />
**This is a for-profit publisher<br />
*This article is available both online and in print.<br />
**LMU has not paid a fee for my access to this article.<br />
*I could not find the data associated with this article.<br />
<br />
<br />
{{Pagedesiigner}}</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4448
Nicolekalcic Week 11
2017-11-14T05:44:02Z
<p>Nicolekalcic: added IBM/* References */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings:<br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf: "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (Ibm.com, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Ibm.com. (2017). Tealeaf is now part of IBM Analytics | IBM. Accessed November 13, 2017, from https://www.ibm.com/customer-engagement/tealeaf <br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4447
Nicolekalcic Week 11
2017-11-14T05:43:03Z
<p>Nicolekalcic: added IBM/* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings:<br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf: "Tealeaf is a Customer Experience Management software company, now owned by IBM. Its CX line of products captures website interaction from the actual users' perspectives" (Ibm.com, 2017).<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4442
Nicolekalcic Week 11
2017-11-14T05:32:11Z
<p>Nicolekalcic: fixed spacing /* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings:<br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf:<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4441
Nicolekalcic Week 11
2017-11-14T05:31:21Z
<p>Nicolekalcic: added kissmetrics /* References */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings:<br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to<br />
deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf:<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Kissmetrics. (2017). Kissmetrics | The Customer Engagement Automation Platform. Accessed November 13, 2017, from https://www.kissmetrics.com/product/<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4440
Nicolekalcic Week 11
2017-11-14T05:30:23Z
<p>Nicolekalcic: added kiss metrics /* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings:<br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics: "Kissmetrics combines behavioral analytics, segmentation and email campaign automation to<br />
deeply understand and engage your customers every step of the way" (Kissmetrics, 2017).<br />
#IBM TeaLeaf:<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4427
Nicolekalcic Week 11
2017-11-14T04:55:38Z
<p>Nicolekalcic: deleted a mistake /* References */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings:<br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics:<br />
#IBM TeaLeaf:<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4426
Nicolekalcic Week 11
2017-11-14T04:55:12Z
<p>Nicolekalcic: added new /* References */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings:<br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics:<br />
#IBM TeaLeaf:<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* Liikkanen, L. (2017). The Data-Driven Design Era in Professional Web Design. Accessed November 13, 2017, from http://delivery.acm.org/10.1145/3130000/3121355/p52-liikkanen.pdf?ip=157.242.223.254&id=3121355&acc=ACTIVE%20SERVICE&key=80B0E63637265656%2E958C566062FD1C18%2E4D4702B0C3E38B35%2E4D4702B0C3E38B35&CFID=829067610&CFTOKEN=20249523&__acm__=1510614806_1e8b314e23f771f9b139d99596801365 [Accessed 13 Nov. 2017].<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
* ProgrammableWeb. (2017). HeatMap. Accessed November 13, 2017, from https://www.programmableweb.com/api/heatmap<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4401
Nicolekalcic Week 11
2017-11-14T02:56:18Z
<p>Nicolekalcic: edited note/* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with beforehand. (NOTE: Many of these words were defined in the text, and their in-text definitions were more sufficient than the definitions I was able to find elsewhere on the internet)<br />
<br />
They are as follows:<br />
<br />
#Heatmaps: "A heat map is a graphical representation of two dimensional data (X, Y and Value) on a two dimensional surface by using colors. Our software creates heat map images you can overlay on your maps in your software" (ProgrammableWeb, 2017).<br />
#Behavioral Analytics: "Behavioral analytics are the precursor to all current data-driven design solutions. They have been possible since the first Web server started to create usage logs. Analytics services collect data about user interactions with a Web service, aka the click-stream data, along with all contextual data related to the visit, and aggregate it for reporting" (Liikkanen, 2017).<br />
#Passive Tracking:<br />
#Assistive Tools:<br />
#Agentive Tools:<br />
#User Screen Recordings:<br />
#ABX/Multivariate Tests:<br />
#Google Optimize:<br />
#KISSMetrics:<br />
#IBM TeaLeaf:<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4397
Nicolekalcic Week 11
2017-11-14T02:31:03Z
<p>Nicolekalcic: added terms/* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with. They are as follows:<br />
<br />
#Heatmaps<br />
#Behavioral Analytics<br />
#Passive Tracking<br />
#Assistive Tools<br />
#Agentive Tools<br />
#User Screen Recordings<br />
#ABX/Multivariate Tests<br />
#Google Optimize<br />
#KISSMetrics<br />
#IBM TeaLeaf<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4361
Nicolekalcic Week 11
2017-11-13T23:49:24Z
<p>Nicolekalcic: adding terms</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with. They are as follows:<br />
<br />
#Heatmaps<br />
#<br />
#<br />
#<br />
#<br />
#<br />
#<br />
#<br />
#<br />
#<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4360
Nicolekalcic Week 11
2017-11-13T23:30:17Z
<p>Nicolekalcic: formatting change/* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
*Read: ''The Data-Driven Design Era in Professional Web Design''<br />
*By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with.<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic
https://xmlpipedb.lmucs.io/biodb/fall2017/index.php?title=Nicolekalcic_Week_11&diff=4359
Nicolekalcic Week 11
2017-11-13T23:29:47Z
<p>Nicolekalcic: starting assignment /* Electronic Journal */</p>
<hr />
<div><br />
==Electronic Journal==<br />
Read: ''The Data-Driven Design Era in Professional Web Design''<br />
By: Lassi A. Liikkanen<br />
<br />
After reading the article, I identified ten development/design terms that I wasn't familiar with.<br />
<br />
== Acknowledgements ==<br />
*I worked with my homework partners [[User: ArashLari|Arash Lari]], [[User: Hhinsch|Hayden Hinsch]], and [[User: Mbalducc|Mary Balducci]] in class and via text to complete this assignment. <br />
<br />
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.<br />
[[User:Nicolekalcic|Nicolekalcic]] ([[User talk:Nicolekalcic|talk]]) 14:29, 13 November 2017 (PST)<br />
<br />
== References ==<br />
* LMU BioDB 2017. (2017). Week 11. Retrieved November 13, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11<br />
<br />
==Links==<br />
{{Template:Nicolekalcic}}<br />
<br />
<br />
[[Category: Journal Entry]]</div>
Nicolekalcic