Aporras1 Week 9 - Revision history

Aporras1: final deliverable (I think)

2017-10-31T03:06:54Z

final deliverable (I think)

2017-10-31T03:02:48Z

‎Acknowledgements: dondi acknowledgement

2017-10-31T03:01:02Z

‎References: ensembl

2017-10-31T02:54:57Z

‎Web Service API Exploration: final

2017-10-31T02:49:23Z

‎Web Service API Exploration: fixed ID

2017-10-31T02:48:26Z

‎Web Service API Exploration: id

2017-10-31T02:46:01Z

‎Web Service API Exploration: fixed curled code

2017-10-31T02:43:24Z

‎Web Service API Exploration: more notes

2017-10-31T02:41:53Z

‎Web Service API Exploration: notes on api

2017-10-31T02:35:58Z

first notes for WEB api exp

@@ Line 139: / Line 139: @@
 #Went to their example and used their format to format the URL: http://rest.ensembl.org/lookup/id/ENSG00000157764?content-type=application/json
 #Instead of using their id, I replaced it with "YMR199W" to ultimately make this URL: http://rest.ensembl.org/lookup/id/YMR199W?content-type=application/json
 ==Acknowledgements==

@@ Line 144: / Line 144: @@
 #Met outside of class and worked in class with [[User:Zvanysse|Zach Van Ysseldyk]] to discuss any questions we had throughout the process of completing the Week 9 assignment.
 #Additionally, worked alongside [[User:ArashLari|Arash Lari]] and [[User:Nicolekalcic|Nicole Kalcic]] to complete the Web Service API Exploration on the Week 9 assignment.
 '''While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.'''

← Older revision		Revision as of 03:01, 31 October 2017
Line 152:		Line 152:

	#LMU BioDB 2017. (2017). Week 9. Retrieved October 24, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_9		#LMU BioDB 2017. (2017). Week 9. Retrieved October 24, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_9
		+	#Ensembl Gene Browser 90. (n.d.). Retrieved October 30, 2017, from https://www.ensembl.org/

	[[Category:Journal Entry]]		[[Category:Journal Entry]]

@@ Line 136: / Line 136: @@
 #Resulted in putting the following into Bash: curl http://rest.ensembl.org/lookup/symbol/saccharomyces_cerevisiae/CLN1?content-type=application/json
 #Found the id for CLN1 to be "YMR199W".
 ==Acknowledgements==

@@ Line 135: / Line 135: @@
 #So, I knew the species "homo_sapiens" had to be replaced by "saccharomyces_cerevisiae" and "BRCA2" with "CLN1".
 #Resulted in putting the following into Bash: curl http://rest.ensembl.org/lookup/symbol/saccharomyces_cerevisiae/CLN1?content-type=application/json
-#Found the id for CLN1 to be "S000004812".
+#Found the id for CLN1 to be "YMR199W".
 ==Acknowledgements==

@@ Line 130: / Line 130: @@
 #Clicked on the first link http://rest.ensembl.org/documentation and went down to "GET lookup/symbol/:species/:symbol
 #Knowing that the "species" had to be "saccharomyces_cerevisiae", I looked through their example requests and tried using bash next to see what came up.
-#First I tried curling http://rest.ensembl.org/lookup/symbol/homo_sapiens/BRCA2?Content-type=application/json to see if their example worked.
+#First I tried curling http://rest.ensembl.org/lookup/symbol/homo_sapiens/BRCA2?content-type=application/json to see if their example worked.
 #Their example worked and provided the information they said it would.
 #Next, I tried it for the favorite gene we used:CLN1.
 #So, I knew the species "homo_sapiens" had to be replaced by "saccharomyces_cerevisiae" and "BRCA2" with "CLN1".
-#Resulted in putting the following into Bash: curl http://rest.ensembl.org/lookup/symbol/saccharomyces_cerevisiae/CLN1?Content-type=application/json
+#Resulted in putting the following into Bash: curl http://rest.ensembl.org/lookup/symbol/saccharomyces_cerevisiae/CLN1?content-type=application/json
 ==Acknowledgements==

@@ Line 126: / Line 126: @@
 #The graph bounding box was allowed to extend past the viewport and graph zoomed out.
 #Passed test eighteen.
 ==Acknowledgements==