Emmatyrnauer Week 4 - Revision history

Emmatyrnauer: /* Acknowledgements */ linking professor names to user pages

2017-09-26T03:46:36Z

‎Acknowledgements: linking professor names to user pages

Emmatyrnauer: adding category: journal entry

2017-09-26T02:23:50Z

adding category: journal entry

Emmatyrnauer: /* Electronic Notebook */ adding final steps in notebook

2017-09-26T01:46:22Z

‎Electronic Notebook: adding final steps in notebook

Emmatyrnauer: /* Acknowledgements */ adding to acknowledgements

2017-09-26T01:33:05Z

‎Acknowledgements: adding to acknowledgements

Emmatyrnauer: /* References */ adding to references

2017-09-26T01:03:46Z

‎References: adding to references

Emmatyrnauer: adding zip file

2017-09-26T01:00:46Z

adding zip file

Emmatyrnauer: /* Electronic Notebook */ adding to notebook

2017-09-25T23:42:38Z

‎Electronic Notebook: adding to notebook

Emmatyrnauer: /* Electronic Notebook */ adding to electronic notebook

2017-09-25T23:34:29Z

‎Electronic Notebook: adding to electronic notebook

Emmatyrnauer: /* Acknowledgements */ added homework partner, academic honesty general statement, and signature

2017-09-25T16:21:01Z

‎Acknowledgements: added homework partner, academic honesty general statement, and signature

Emmatyrnauer: /* References */ added week 4 reference

2017-09-25T16:17:22Z

‎References: added week 4 reference

@@ Line 7: / Line 7: @@
 =Acknowledgements=
 #I worked with my homework partner [[User:Qlanners|Quinn Lanners]] in class. We met face-to-face on Monday to construct our webpage.
-#Dr. Dondi introduced html and Bootstrap during class
+#[[User:Dondi|Dr. Dondi]] introduced html and Bootstrap during class
-#Dr. Dahlquist introduced the four gene databases and how to analyze their quality
+#[[User:Kdahlquist|Dr. Dahlquist]] introduced the four gene databases and how to analyze their quality
 #While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.
 [[User:Emmatyrnauer|Emmatyrnauer]] ([[User talk:Emmatyrnauer|talk]]) 09:21, 25 September 2017 (PDT)

← Older revision		Revision as of 02:23, 26 September 2017
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	*UniProt. (2017). "Q02336 (ADA2_Yeast)". Retrieved September 24, 2017, from http://www.uniprot.org/uniprot/Q02336		*UniProt. (2017). "Q02336 (ADA2_Yeast)". Retrieved September 24, 2017, from http://www.uniprot.org/uniprot/Q02336
	*WikiMedia Commons. (2015). "File:Type ii nuclear receptor action.png". Retrieved September 25, 2017, from https://commons.wikimedia.org/wiki/File:Type_ii_nuclear_receptor_action.png		*WikiMedia Commons. (2015). "File:Type ii nuclear receptor action.png". Retrieved September 25, 2017, from https://commons.wikimedia.org/wiki/File:Type_ii_nuclear_receptor_action.png
		+
		+	[[Category:Journal Entry]]

@@ Line 3: / Line 3: @@
 =Electronic Notebook=
-To begin this assignment, Quinn and I chose our favorite gene during class. We searched on the SGD database by clicking on the function tab and then selecting all phenotypes. I was interested in genes that helped improve fitness so I looked into that feature and found ADA2. I thought it would be a good gene to look at since we had previously talked a lot about transcription and this gene is involved in that. We then decided to do some research on the gene individually so that when we met up on Monday, we would have all the information we needed to add to our website. On Monday we met up and began working on the webpage. Quinn downloaded the starter files onto his computer and I had my computer open to look up information. We used the Bootstrap website for presentation formats and began answering the assignment questions on the webpage. For question 1, we thought it might be helpful to display the information in a table, so the code for that was taken from Bootstrap. We navigated the four databases ([http://www.yeastgenome.org SGD itself], [https://www.ncbi.nlm.nih.gov/gene NCBI Gene Database], [https://www.ensembl.org/Saccharomyces_cerevisiae/Info/Index Ensembl], and [http://www.uniprot.org UniProt]) to answer all of the assignment questions, however SGD seemed to provide us with the most information. While we kept most of our webpage fairly simple in design, we decided to use the carousel feature on Bootstrap to represent the pros, cons, and unique features of each website. Quinn and I managed to finish most of the assignment during the two hours we met.
+To begin this assignment, Quinn and I chose our favorite gene during class. We searched on the SGD database by clicking on the function tab and then selecting all phenotypes. I was interested in genes that helped improve fitness so I looked into that feature and found ADA2. I thought it would be a good gene to look at since we had previously talked a lot about transcription and this gene is involved in this process. We then decided to do some research on the gene individually so that when we met up in person, we would have all the information we needed to add to our webpage. On Monday we met up and began working on the webpage. Quinn downloaded the starter files onto his computer and I had my computer open to look up information. We used the Bootstrap website for presentation formats and began answering the assignment questions on the webpage. For question 1, we thought it might be helpful to display the information in a table and to link to both the database and the specific gene page (this code was taken from Bootstrap). We navigated the four databases ([http://www.yeastgenome.org SGD itself], [https://www.ncbi.nlm.nih.gov/gene NCBI Gene Database], [https://www.ensembl.org/Saccharomyces_cerevisiae/Info/Index Ensembl], and [http://www.uniprot.org UniProt]) to answer all of the assignment questions, however SGD seemed to provide us with the most information. While we kept most of our webpage fairly simple in design, we decided to use the carousel feature on Bootstrap to represent the pros, cons, and unique features of each database. Quinn and I managed to finish most of the assignment during the two hours we met due to the fact that we had done research before meeting. After finishing up, he checked for any errors and uploaded the file to his wiki. I then reviewed the file and linked to it from my webpage.
 =Acknowledgements=

@@ Line 7: / Line 7: @@
 =Acknowledgements=
 #I worked with my homework partner [[User:Qlanners|Quinn Lanners]] in class. We met face-to-face on Monday to construct our webpage.
 #While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.
 [[User:Emmatyrnauer|Emmatyrnauer]] ([[User talk:Emmatyrnauer|talk]]) 09:21, 25 September 2017 (PDT)

← Older revision		Revision as of 01:03, 26 September 2017
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	=References=		=References=
−	LMU BioDB 2017. (2017). Week 4. Retrieved September 25, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_4	+	*LMU BioDB 2017. (2017). Week 4. Retrieved September 25, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_4
		+	*Bootstrap. (2017). Documentation. Retrieved September 25, 2017, from https://getbootstrap.com/docs/4.0/getting-started/introduction/
		+	*Ensembl. (2017). "Gene: ADA2". Retrieved September 24, 2017, from https://www.ensembl.org/Saccharomyces_cerevisiae/Transcript/Summary?db=core;g=YDR448W;r=IV:1356065-1357369;t=YDR448W
		+	*NCBI. (2017). "ADA2 chromatin-binding transcription regulator". Retrieved September 24, 2017, from https://www.ncbi.nlm.nih.gov/gene/852059
		+	*Saccharomyces Genome Database. (2017). "ADA2/YDR448W Overview". Retrieved September 24, 2017, from https://www.yeastgenome.org/locus/S000002856
		+	*UniProt. (2017). "Q02336 (ADA2_Yeast)". Retrieved September 24, 2017, from http://www.uniprot.org/uniprot/Q02336
		+	*WikiMedia Commons. (2015). "File:Type ii nuclear receptor action.png". Retrieved September 25, 2017, from https://commons.wikimedia.org/wiki/File:Type_ii_nuclear_receptor_action.png

← Older revision		Revision as of 01:00, 26 September 2017
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		+	=Favorite Gene Page=
		+	[[File:Lanners-Tyrnauer_2.zip]]
		+
	=Electronic Notebook=		=Electronic Notebook=
	To begin this assignment, Quinn and I chose our favorite gene during class. We searched on the SGD database by clicking on the function tab and then selecting all phenotypes. I was interested in genes that helped improve fitness so I looked into that feature and found ADA2. I thought it would be a good gene to look at since we had previously talked a lot about transcription and this gene is involved in that. We then decided to do some research on the gene individually so that when we met up on Monday, we would have all the information we needed to add to our website. On Monday we met up and began working on the webpage. Quinn downloaded the starter files onto his computer and I had my computer open to look up information. We used the Bootstrap website for presentation formats and began answering the assignment questions on the webpage. For question 1, we thought it might be helpful to display the information in a table, so the code for that was taken from Bootstrap. We navigated the four databases ([http://www.yeastgenome.org SGD itself], [https://www.ncbi.nlm.nih.gov/gene NCBI Gene Database], [https://www.ensembl.org/Saccharomyces_cerevisiae/Info/Index Ensembl], and [http://www.uniprot.org UniProt]) to answer all of the assignment questions, however SGD seemed to provide us with the most information. While we kept most of our webpage fairly simple in design, we decided to use the carousel feature on Bootstrap to represent the pros, cons, and unique features of each website. Quinn and I managed to finish most of the assignment during the two hours we met.		To begin this assignment, Quinn and I chose our favorite gene during class. We searched on the SGD database by clicking on the function tab and then selecting all phenotypes. I was interested in genes that helped improve fitness so I looked into that feature and found ADA2. I thought it would be a good gene to look at since we had previously talked a lot about transcription and this gene is involved in that. We then decided to do some research on the gene individually so that when we met up on Monday, we would have all the information we needed to add to our website. On Monday we met up and began working on the webpage. Quinn downloaded the starter files onto his computer and I had my computer open to look up information. We used the Bootstrap website for presentation formats and began answering the assignment questions on the webpage. For question 1, we thought it might be helpful to display the information in a table, so the code for that was taken from Bootstrap. We navigated the four databases ([http://www.yeastgenome.org SGD itself], [https://www.ncbi.nlm.nih.gov/gene NCBI Gene Database], [https://www.ensembl.org/Saccharomyces_cerevisiae/Info/Index Ensembl], and [http://www.uniprot.org UniProt]) to answer all of the assignment questions, however SGD seemed to provide us with the most information. While we kept most of our webpage fairly simple in design, we decided to use the carousel feature on Bootstrap to represent the pros, cons, and unique features of each website. Quinn and I managed to finish most of the assignment during the two hours we met.

← Older revision		Revision as of 16:17, 25 September 2017
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	=References=		=References=
		+	LMU BioDB 2017. (2017). Week 4. Retrieved September 25, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_4