Gene hAPI - Revision history

Johnllopez616: /* Executive Summaries */ Added john's week 15

2017-12-16T00:19:37Z

‎Executive Summaries: Added john's week 15

2017-12-15T23:02:46Z

updated week 15

2017-12-12T03:31:23Z

updated week 15

2017-12-12T02:52:08Z

Added my week 15 section

2017-12-12T02:49:11Z

Moved GRNsight Gene Page Project Links template

2017-12-12T02:47:54Z

Added important links

2017-12-09T21:01:22Z

Added reference and acknowledgment

2017-12-09T21:00:39Z

dina added week 14 and 15

2017-12-09T20:58:34Z

Added references

2017-12-08T21:18:46Z

‎Executive Summaries: adding weeks

@@ Line 119: / Line 119: @@
 **This week will be crucial in finishing Milestone 4 for the project. It's absolutely necessary that the coders and I not only integrate everything, but that I am following along with what they do. I will ask a lot of questions to truly understand what's happening.
 [[User:Johnllopez616|Johnllopez616]] ([[User talk:Johnllopez616|talk]]) 23:16, 4 December 2017 (PST)
 ==Journal Club Deliverable==

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 [[User:Dbashour|Dbashour]] ([[User talk:Dbashour|talk]]) 13:00, 9 December 2017 (PST)
 *[[Dbashour_Week_15 | Week 15]]
-** This week, Dr. Dahlquist reviewed my files and made corrections to them so that they would work and be visualized in GRNsight. I organized my final deliverables in order to prepare for the final project. As a team we worked together to complete the final powerpoint. <br>
+** This week, Dr. Dahlquist reviewed my files and made corrections to them so that they would work and be visualized in GRNsight. I organized my final deliverables in order to prepare for the final project. As a team we worked together to complete the final powerpoint and paper, meeting in class as well as outside of class to work on it. <br>
 [[User:Dbashour|Dbashour]] ([[User talk:Dbashour|talk]]) 13:00, 9 December 2017 (PST)

@@ Line 73: / Line 73: @@
 [[User:Dbashour|Dbashour]] ([[User talk:Dbashour|talk]]) 13:00, 9 December 2017 (PST)
 *[[Dbashour_Week_15 | Week 15]]
-** This week, Dr. Dahlquist reviewed my files and made corrections to them so that they would work and be visualized in GRNsight. I organized my final deliverables in order to prepare for the final project. <br>
+** This week, Dr. Dahlquist reviewed my files and made corrections to them so that they would work and be visualized in GRNsight. I organized my final deliverables in order to prepare for the final project. As a team we worked together to complete the final powerpoint. <br>
 [[User:Dbashour|Dbashour]] ([[User talk:Dbashour|talk]]) 13:00, 9 December 2017 (PST)

@@ Line 94: / Line 94: @@
 **Having to split the class time between working with our team members and working with our guilds was a bit of a challenge because there was a lot to cover between both groups. We made it work, but hopefully we'll be able to find a time to meet outside of class as well this coming week to work on our project.
 [[User:Cwong34|Cwong34]] ([[User talk:Cwong34|talk]]) 00:25, 5 December 2017 (PST)
 '''John''':

@@ Line 9: / Line 9: @@
 [http://dondi.github.io/GRNsight/ GRNsight]
 ===General Information===
@@ Line 134: / Line 136: @@
 #Murata et. al.(2006). Genome-wide expression analysis of yeast response during exposure to 4 C. Extremophiles, 10(2), 117-128.
 #Sahara, T., Goda, T., & Ohgiya, S. (2002). Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature. Journal of Biological Chemistry, 277(51), 50015-50021.

← Older revision		Revision as of 02:47, 12 December 2017
Line 1:		Line 1:
	==Gene hAPI==		==Gene hAPI==
		+
		+	===Links===
		+	Our Deliverables: [[Gene hAPI Deliverables]]
		+
		+	Main Page: [[Main Page]]
		+
		+	Project Page: [[GRNsight Gene Page Project]]
		+
		+	[http://dondi.github.io/GRNsight/ GRNsight]

	===General Information===		===General Information===

@@ Line 116: / Line 116: @@
 =Acknowledgments=
 =References=
@@ Line 121: / Line 122: @@
 #Paul Ford, 2015, Bloomberg, Retrieved from: https://www.bloomberg.com/graphics/2015-paul-ford-what-is-code/#the-time-you-attended-the-e-mail-address-validation-meeting
 #Homma T., Iwahashi H., & Komatsu Y. (2003). Yeast gene expression during growth at low temperature. Cryobiology, 46(3), 230-237. https://doi.org/10.1016/S0011-2240(03)00028-2
-#LMU
+#LMU BioDB 2017. (2017). GRNsight Gene Page Project. Retrieved from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/GRNsight_Gene_Page_Project
 #Murata et. al.(2006). Genome-wide expression analysis of yeast response during exposure to 4 C. Extremophiles, 10(2), 117-128.
 #Sahara, T., Goda, T., & Ohgiya, S. (2002). Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature. Journal of Biological Chemistry, 277(51), 50015-50021.
 {{Template:GRNsight Gene Page Project Links}}

@@ Line 55: / Line 55: @@
 ** Next week, we will all communicate via text either with the entire class or with just my group in order to clarify what the role of each person is and if we have been completing our tasks. <br>
 [[User:Dbashour|Dbashour]] ([[User talk:Dbashour|talk]]) 12:10, 21 November 2017 (PST)
 '''Corinne''':

← Older revision		Revision as of 20:58, 9 December 2017
Line 105:		Line 105:
	<br>		<br>
	{{template:Gene_hAPI}}		{{template:Gene_hAPI}}
		+
		+	=Acknowledgments=
		+
		+	=References=
		+	#Becerra M., Lombardía L.J., González-Siso M.I., Rodríguez-Belmonte E., Hauser N.C., & Cerdán M.E. (2003). Genome-wide analysis of the yeast transcriptome upon heat and cold shock. Comparative and Functional Genomics, 4(4), 366-375. doi: 10.1002/cfg.301
		+	#Paul Ford, 2015, Bloomberg, Retrieved from: https://www.bloomberg.com/graphics/2015-paul-ford-what-is-code/#the-time-you-attended-the-e-mail-address-validation-meeting
		+	#Homma T., Iwahashi H., & Komatsu Y. (2003). Yeast gene expression during growth at low temperature. Cryobiology, 46(3), 230-237. https://doi.org/10.1016/S0011-2240(03)00028-2
		+	#LMU
		+	#Murata et. al.(2006). Genome-wide expression analysis of yeast response during exposure to 4 C. Extremophiles, 10(2), 117-128.
		+	#Sahara, T., Goda, T., & Ohgiya, S. (2002). Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature. Journal of Biological Chemistry, 277(51), 50015-50021.
		+
		+	{{Template:GRNsight Gene Page Project Links}}

@@ Line 32: / Line 32: @@
 ** This next week, I'll focus on keeping an open line of communication with the rest of my team, as well as completing the majority of the coding milestones that we have left.
 [[User:Cazinge|Cazinge]] ([[User talk:Cazinge|talk]]) 23:39, 20 November 2017 (PST)
 '''Dina''':