IMG/VR Database - Revision history

Aporras1: /* Presentation */ added zip

2017-10-03T06:40:24Z

‎Presentation: added zip

2017-10-03T06:38:59Z

presentation header

2017-10-03T06:37:42Z

added category

2017-10-03T06:09:51Z

‎Acknowledgements

2017-10-03T05:56:40Z

fixed user link

2017-10-03T05:54:52Z

added user pages

2017-10-03T05:53:33Z

‎Electronic Lab Notebook: final notes

2017-10-03T05:30:17Z

‎Electronic Lab Notebook: further notes 2

2017-10-03T05:21:55Z

‎Electronic Lab Notebook: more notes on procedure

2017-10-03T05:15:24Z

‎Electronic Lab Notebook: added notes

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 ==Presentation==
+[[File:Alappresentation.zip]]
 ==Acknowledgements==

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 #We then gave the final judgement based off the prior information that we would only direct a professional or researcher to this website because of the complexity and how raw the data is presented.
 #Finally, we decided that it was definitely a professional database.
 ==Acknowledgements==

← Older revision		Revision as of 06:37, 3 October 2017
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	#LMU BioDB 2017. (2017). Week 5. Retrieved October 01, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_5		#LMU BioDB 2017. (2017). Week 5. Retrieved October 01, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_5
	#Paez-Espino, D., Chen, I., Palaniappan, K., Ratner, A., Chu, K., Szeto, E., Pillay, M., Huang, J., Markowitz, V., Nielsen, T., Huntemann, M., K. Reddy, T., Pavlopoulos, G., Sullivan, M., Campbell, B., Chen, F., McMahon, K., Hallam, S., Denef, V., Cavicchioli, R., Caffrey, S., Streit, W., Webster, J., Handley, K., Salekdeh, G., Tsesmetzis, N., Setubal, J., Pope, P., Liu, W., Rivers, A., Ivanova, N. and Kyrpides, N. (2017). IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses.		#Paez-Espino, D., Chen, I., Palaniappan, K., Ratner, A., Chu, K., Szeto, E., Pillay, M., Huang, J., Markowitz, V., Nielsen, T., Huntemann, M., K. Reddy, T., Pavlopoulos, G., Sullivan, M., Campbell, B., Chen, F., McMahon, K., Hallam, S., Denef, V., Cavicchioli, R., Caffrey, S., Streit, W., Webster, J., Handley, K., Salekdeh, G., Tsesmetzis, N., Setubal, J., Pope, P., Liu, W., Rivers, A., Ivanova, N. and Kyrpides, N. (2017). IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses.
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		+	[[Category:Journal Entry]]

← Older revision		Revision as of 06:09, 3 October 2017
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	[[User:Aporras1\|Aporras1]] ([[User talk:Aporras1\|talk]]) 22:03, 2 October 2017 (PDT)		[[User:Aporras1\|Aporras1]] ([[User talk:Aporras1\|talk]]) 22:03, 2 October 2017 (PDT)
		+	[[User:ArashLari\|ArashLari]] ([[User talk:ArashLari\|talk]]) 23:09, 2 October 2017 (PDT)

	==References==		==References==

@@ Line 1: / Line 1: @@
-[[arashlari|Arash Lari]]
+[[user:arashlari|Arash Lari]]
-[[aporras1|Antonio Porras]]
+[[user:aporras1|Antonio Porras]]
 ==General Information==

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 #Looking further into the website, we noticed they are a .gov website and thus proceeded to notice they were a database under the department of energy and run by a group at Cal Berkeley.
 #Antonio looked more into the scientific quality and did some test searches to see what kind of data would appear.
 ==Acknowledgements==

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 #It was difficult to validate how often the database was updated except for when the system was updated.
 #Seeing the date of the study allowed us to see there were genomes added in the year 2017 therefore confirming its curation.
+#We then looked further into their funding source and found the main JGI website.
 ==Acknowledgements==

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 #We chose IMG/VR because of our interest in viruses.
 #Found the name of the database and went through names of viruses to see what would come up.
+#

← Older revision		Revision as of 05:15, 3 October 2017
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	==Electronic Lab Notebook==		==Electronic Lab Notebook==
		+	#We first looked at which databases had articles in the year 2017 and cross-referenced which databases we were interested in.
		+	#We chose IMG/VR because of our interest in viruses.
		+	#Found the name of the database and went through names of viruses to see what would come up.
	#		#