Kwrigh35 Week 11 - Revision history

Kwrigh35: /* References */ added reference

2017-11-14T09:52:30Z

‎References: added reference

Kwrigh35: /* Acknowledgements */ added acknowledgements

2017-11-14T09:51:22Z

‎Acknowledgements: added acknowledgements

Kwrigh35: /* Paper 2 */ finished answering questions

2017-11-14T09:43:43Z

‎Paper 2: finished answering questions

Kwrigh35: /* Paper 2 */ added bold, added answers.

2017-11-14T07:54:05Z

‎Paper 2: added bold, added answers.

Kwrigh35: /* Paper 1 */ added bold

2017-11-14T07:48:42Z

‎Paper 1: added bold

Kwrigh35: /* Paper 1 */ added bibliography

2017-11-14T07:47:39Z

‎Paper 1: added bibliography

Kwrigh35: /* Annotated Bibliography */ added structure to answers

2017-11-14T07:40:53Z

‎Annotated Bibliography: added structure to answers

Kwrigh35: /* Electronic Notebook */ added answers to #2

2017-11-14T05:47:00Z

‎Electronic Notebook: added answers to #2

Kwrigh35: /* Electronic Notebook */ added more answers

2017-11-14T05:35:54Z

‎Electronic Notebook: added more answers

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2017-11-14T05:03:15Z

‎Electronic Notebook: changed list levels

← Older revision		Revision as of 09:52, 14 November 2017
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	==References==		==References==
		+	LMU BioDB 2017. (2017). Week 11. Retrieved November 9, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11

	{{template:kwrigh35}}		{{template:kwrigh35}}

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 ==Acknowledgements==
 ==References==
 {{template:kwrigh35}}

@@ Line 73: / Line 73: @@
 '''Publisher Full Text (HTML): ''' http://www.jbc.org/content/277/51/50015.long
-'''Publisher Full Text (PDF): '''
+'''Publisher Full Text (PDF): ''' http://www.jbc.org/content/277/51/50015.full.pdf
-'''Copyright: '''
+'''Copyright: ''' "Other parties are welcome to copy, distribute, transmit and adapt the work — at no cost and without permission — for noncommercial use as long as they attribute the work to the original source using the citation above." from http://www.jbc.org/site/misc/Copyright_Permission.xhtml
-'''Publisher: '''
+'''Publisher: ''' American Society for Biochemistry and Molecular Biology
-'''Availability: '''
+'''Availability: '''All articles from this journal are free 1 year after publishing.
-'''Did LMU pay a fee for this article:'''
+'''Did LMU pay a fee for this article:''' No.
 ==Acknowledgements==

@@ Line 65: / Line 65: @@
 ===Paper 2===
-PubMed Abstract:
+Sahara, T., Goda, T., & Ohgiya, S. (2002). Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature. Journal of Biological Chemistry, 277(51), 50015-50021.
 PubMed Central:
-Publisher Full Text (HTML):
+'''PubMed Abstract: ''' https://www.ncbi.nlm.nih.gov/pubmed/?term=Comprehensive+expression+analysis+of+time-dependent+genetic+responses+in+yeast+cells+to+low+temperature
 Publisher Full Text (PDF):
-Copyright:
+'''PubMed Central: ''' not available
 Publisher:
-Availability:
+'''Publisher Full Text (HTML): ''' http://www.jbc.org/content/277/51/50015.long
 Did LMU pay a fee for this article:
 ==Acknowledgements==

@@ Line 48: / Line 48: @@
 Becerra, M., Lombardia, L. J., González‐Siso, M. I., Rodríguez‐Belmonte, E., Hauser, N. C., & Cerdán, M. E. (2003). Genome‐wide analysis of the yeast transcriptome upon heat and cold shock. Comparative and functional genomics, 4(4), 366-375.
-PubMed Abstract: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447359/
+'''PubMed Abstract:''' https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447359/
-PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447359/pdf/CFG-04-366.pdf
+'''PubMed Central:''' https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447359/pdf/CFG-04-366.pdf
-Publisher Full Text (HTML): unavailable
+'''Publisher Full Text (HTML):''' unavailable
-Publisher Full Text (PDF): http://downloads.hindawi.com/journals/ijg/2003/175356.pdf
+'''Publisher Full Text (PDF):''' http://downloads.hindawi.com/journals/ijg/2003/175356.pdf
-Copyright: Copyright © 2003 Hindawi Publishing Corporation. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
+'''Copyright:''' Copyright © 2003 Hindawi Publishing Corporation. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
-Publisher: Hindawi Publishing Corporation
+'''Publisher:''' Hindawi Publishing Corporation
-Availability: Open access
+'''Availability:''' Open access
-Did LMU pay a fee for this article: no
+'''Did LMU pay a fee for this article:''' no
 ===Paper 2===

← Older revision		Revision as of 07:40, 14 November 2017
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	==Annotated Bibliography==		==Annotated Bibliography==
		+	===Paper 1===
		+	PubMed Abstract:
		+	PubMed Central:
		+	Publisher Full Text (HTML):
		+	Publisher Full Text (PDF):
		+	Copyright:
		+	Publisher:
		+	Availability:
		+	Did LMU pay a fee for this article:
		+
		+	===Paper 2===
		+	PubMed Abstract:
		+	PubMed Central:
		+	Publisher Full Text (HTML):
		+	Publisher Full Text (PDF):
		+	Copyright:
		+	Publisher:
		+	Availability:
		+	Did LMU pay a fee for this article:

	==Acknowledgements==		==Acknowledgements==

@@ Line 35: / Line 35: @@
 ## Perform a prospective search on the following three review articles in Web of Science and answer the following:
 ##* Aguilera, J., Randez-Gil, F., & Prieto, J.A. (2007).  Cold Response in Saccharomyces cerevisiae:  New Functions for Old Mechanisms.  FEMS Microbiological Reviews,  31, 327–341.  doi: 10.1111/j.1574-6976.2007.00066.x
-##** How many articles does this article cite?
+##** How many articles does this article cite? '''144'''
-##** How many articles cite this article?
+##** How many articles cite this article?'''77'''
 ##* Al-Fageeh, M.B. & Smales, C.M. (2006).  Control and Regulation of the Cellular Responses to Cold Shock:  the Responses in Yeast and Mammalian Systems.  Biochemical Journal, 397, 247–259.  doi:  10.1042/BJ20060166
-##** How many articles does this article cite?
+##** How many articles does this article cite?'''125'''
-##** How many articles cite this article?
+##** How many articles cite this article?'''108'''
 ##* Thieringer, H.A., Jones, P.G.,& Inouye, M. (1998).  Cold shock and adaptation.  BioEssays, 20, 49–57.  doi: 10.1002/(SICI)1521-1878(199801)20:1<49::AID-BIES8>3.0.CO;2-N
-##** How many articles does this article cite?
+##** How many articles does this article cite?'''76'''
-##** How many articles cite this article?
+##** How many articles cite this article?'''258'''
 ==Annotated Bibliography==

@@ Line 20: / Line 20: @@
 ## PubMed
 ##* Which advanced search functions were most useful to narrow down the search?  How many results did you get?
 ## Google Scholar
 ##* Which advanced search functions were most useful to narrow down the search?  How many results did you get?
 ## Web of Science
 ##* Which advanced search functions were most useful to narrow down the search?  How many results did you get?
 ## Perform a prospective search on the following three review articles in Web of Science and answer the following:
 ##* Aguilera, J., Randez-Gil, F., & Prieto, J.A. (2007).  Cold Response in Saccharomyces cerevisiae:  New Functions for Old Mechanisms.  FEMS Microbiological Reviews,  31, 327–341.  doi: 10.1111/j.1574-6976.2007.00066.x

@@ Line 4: / Line 4: @@
 ## PubMed
 ##* What original keyword(s) did you use?  How many results did you get?
-##**'''My search was <code> Microarray AND cold shock AND yeast </code> and it returned 6 results.'''
+##*'''My search was <code> Microarray AND cold shock AND yeast </code> and it returned 6 results.'''
 ##* Which terms in which combinations were most useful to narrow down the search?  How many results did you get after narrowing the search?
-##**'''By adding a space in <code> microarray</code> to make it <code>micro array</code> the search resulted in one article.'''
+##*'''By adding a space in <code> microarray</code> to make it <code>micro array</code> the search resulted in one article.'''
 ## Google Scholar
 ##* What original keyword(s) did you use?  How many results did you get?
-##**'''My search was <code> Microarray AND cold shock AND yeast </code> and it returned about 31,700 results'''
+##*'''My search was <code> Microarray AND cold shock AND yeast </code> and it returned about 31,700 results'''
 ##* Which terms in which combinations were most useful to narrow down the search?  How many results did you get after narrowing the search?
-##**'''I changed my search to <code> "microarray" "cold shock" "yeast" "genome wide" "expression analysis" </code> which resulted in 874 results.
+##*'''I changed my search to <code> "microarray" "cold shock" "yeast" "genome wide" "expression analysis" </code> which resulted in 874 results.
 ## Web of Science
 ##* What original keyword(s) did you use?  How many results did you get?
-##**'''My search was <code>Microarray AND cold shock AND yeast</code> and it returned 10 results.'''
+##*'''My search was <code>Microarray AND cold shock AND yeast</code> and it returned 10 results.'''
 ##* Which terms in which combinations were most useful to narrow down the search?  How many results did you get after narrowing the search?
-##**'''I added the term <code> AND genome wide </code> to my search, which narrowed the results down to 4 papers.
+##*'''I added the term <code> AND genome wide </code> to my search, which narrowed the results down to 4 papers.
 # Use the advanced search functions for each of these three databases/tools and answer the following:
 ## PubMed