Simonwro120 Week 2 - Revision history

Simonwro120: syntax fix and added new template

2017-09-18T01:42:04Z

syntax fix and added new template

Simonwro120: Added the forgotten journal entry category

2017-09-18T01:05:44Z

Added the forgotten journal entry category

Simonwro120: Added assignment link

2017-09-11T20:39:11Z

Added assignment link

Simonwro120: syntax fix

2017-09-11T20:29:30Z

syntax fix

Simonwro120: Finished Assignment

2017-09-11T20:28:12Z

Finished Assignment

Simonwro120 at 20:52, 8 September 2017

2017-09-08T20:52:06Z

Simonwro120: Added Translation

2017-09-08T20:35:50Z

Added Translation

Simonwro120: syntax

2017-09-08T20:04:29Z

syntax

Simonwro120: made complementary sequence

2017-09-08T19:50:13Z

made complementary sequence

Simonwro120: Created page with "==Journal Week 2=="

2017-09-04T21:33:48Z

Created page with "==Journal Week 2=="

New page

==Journal Week 2==

@@ Line 34: / Line 34: @@
   *This reading frame is open and 19 amino acids long
-==Acknowledgments==
+==Acknowledgements==
 Worked with group partner Katie at [[User:kwrigh35 | Katie's Homepage]]
 All original journal entries came from me. [[User:Simonwro120|Simonwro120]] ([[User talk:Simonwro120|talk]]) 13:28, 11 September 2017 (PDT)
@@ Line 42: / Line 42: @@
 *LMU BioDB 2017. (2017). Week 2. Retrieved September 8, 2017, from [https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_2]
-==Assignment link==
+{{simonwro120}}
 [[Category:Journal Entry]]

← Older revision		Revision as of 01:05, 18 September 2017
Line 46:		Line 46:


−	[[Journal Entry]]	+	[[Category:Journal Entry]]

← Older revision		Revision as of 20:39, 11 September 2017
Line 41:		Line 41:
	==References==		==References==
	*LMU BioDB 2017. (2017). Week 2. Retrieved September 8, 2017, from [https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_2]		*LMU BioDB 2017. (2017). Week 2. Retrieved September 8, 2017, from [https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_2]
		+
		+	==Assignment link==
		+	*[https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_2 Assignment Week 2]
		+
		+
		+	[[Journal Entry]]

@@ Line 5: / Line 5: @@
 ===Complementary DNA Sequence===
 ’-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5’
 '''Original Frame +1'''
 ’-cgt-atg-cta-ata-cca-tgt-tcc-gcg-tat-aac-cca-gcc-gcc-agt-tcc-gct-ggc-ggc-att-tta-3’

@@ Line 19: / Line 19: @@
   *This reading frame is closed and has 2 amino acids
-===Complementary RNA Strand====
+===Complementary RNA Strand===
-'-gcauacgauuaugguacaaggcgcauauugggucggcggucaaggcgaccgccguaaaau-5' <br>
+'-gcauacgauuaugguacaaggcgcauauugggucggcggucaaggcgaccgccguaaaau-5'
+ ''Flipped to be read from 5' to 3'
 '-uaaaaugccgccagcggaacuggcggcuggguuauacgcggaacaugguauuagcauacg-3'
-'''Frame -1'''
+'''Complementary Frame -1'''
 '-uaa-aau-gcc-gcc-agc-gga-acu-ggc-ggc-ugg-guu-aua-cgc-gga-aca-ugg-uau-uag-cau-acg-3' <br>
-'-
+  *First codon is a stop codon so the reading frame is closed
-=====Frame -2=====
+'''Complementary Frame -2'''
 '-ua-aaa-ugc-cgc-cag-cgg-aac-ugg-cgg-cug-ggu-uau-acg-cgg-aac-aug-gua-uua-gca-uac-g-3' <br>
-'-
+'-K-C-R-Q-R-N-W-R-L-G-Y-T-R-N-M-V-L-A-Y-3'
-=====Frame -3=====
+ *This reading frame is open and 19 amino acids long
 '-u-aaa-aug-ccg-cca-gcg-gaa-cug-gcg-gcu-ggg-uua-uac-gcg-gaa-cau-ggu-auu-agc-aua-cg-3' <br>
-'-
+'-K-M-P-P-A-E-L-A-A-G-L-Y-A-E-H-G-I-S-I-3'
 ==Acknowledgments==
 Worked with group partner Katie at [[User:kwrigh35 | Katie's Homepage]]
-All original journal entries came from me. [[User:Simonwro120|Simonwro120]] ([[User talk:Simonwro120|talk]]) 13:52, 8 September 2017 (PDT)
+All original journal entries came from me. [[User:Simonwro120|Simonwro120]] ([[User talk:Simonwro120|talk]]) 13:28, 11 September 2017 (PDT)
 Dr. Dondi, and Dr. Dahlquist lectures
 ==References==
 *LMU BioDB 2017. (2017). Week 2. Retrieved September 8, 2017, from [https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_2]

@@ Line 1: / Line 1: @@
 =Journal Week 2=
 ==Genetic Code==
-===Original Sequence===
+===Original DNA Sequence===
 ’-cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta-3’<br>
-===Complementary Sequence===
+===Complementary DNA Sequence===
 ’-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5’
 '''Original Frame +1'''
 ’-cgt-atg-cta-ata-cca-tgt-tcc-gcg-tat-aac-cca-gcc-gcc-agt-tcc-gct-ggc-ggc-att-tta-3’
@@ Line 13: / Line 14: @@
 ’-Y-A-N-T-M-F-R-V-3'
   *This reading frame is closed and 8 amino acids long
-'''Original Frame 3'''
+'''Original Frame +3'''
 ’-c-gta-tgc-taa-tac-cat-gtt-ccg-cgt-ata-acc-cag-ccg-cca-gtt-ccg-ctg-gcg-gca-ttt-ta-3’
 ’-V-C-3’
   *This reading frame is closed and has 2 amino acids

@@ Line 4: / Line 4: @@
 ’-cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta-3’<br>
 ===Complementary Sequence===
-'-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5'
+’-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5’
-'''Original Frame 1'''
+'''Original Frame +1'''
 ’-cgt-atg-cta-ata-cca-tgt-tcc-gcg-tat-aac-cca-gcc-gcc-agt-tcc-gct-ggc-ggc-att-tta-3’
-'-R-M-L-Y
+'-R-M-L-I-P-C-S-A-Y-N-P-A-A-S-S-A-G-G-I-L-3’
-'''Original Frame 2'''
+ *This reading frame is open and 20 amino acids long
 ’-cg-tat-gct-aat-acc-atg-ttc-cgc-gta-taa-ccc-agc-cgc-cag-ttc-cgc-tgg-cgg-cat-ttt-a-3’
 '''Original Frame 3'''
 ’-c-gta-tgc-taa-tac-cat-gtt-ccg-cgt-ata-acc-cag-ccg-cca-gtt-ccg-ctg-gcg-gca-ttt-ta-3’

← Older revision		Revision as of 19:50, 8 September 2017
Line 1:		Line 1:
	==Journal Week 2==		==Journal Week 2==
		+	===Genetic Code===
		+	''Original Sequence''
		+	*5’-cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta-3’<br>
		+	''Complementary Sequence''
		+	*3'-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5'