User talk:Cwong34 - Revision history

Dondi: Add week 9 feedback.

2017-11-24T02:19:48Z

Add week 9 feedback.

Dondi: Add week 7 feedback.

2017-11-22T06:19:45Z

Add week 7 feedback.

Kdahlquist: /* Week 11 Team Page Feedback (to address in Week 12) */

2017-11-16T22:04:37Z

‎Week 11 Team Page Feedback (to address in Week 12)

Dondi: Add team page feedback.

2017-11-16T08:19:25Z

Add team page feedback.

Dondi: Add week 5 shared journal feedback.

2017-10-22T02:24:50Z

Add week 5 shared journal feedback.

Kdahlquist: /* Week 4 Feedback */ added more week 4 feedback

2017-10-13T23:15:34Z

‎Week 4 Feedback: added more week 4 feedback

Kdahlquist: added week 4 partial feedback

2017-10-10T20:05:38Z

added week 4 partial feedback

Kdahlquist: added week 4 partial feedback

2017-10-10T20:04:59Z

added week 4 partial feedback

Dondi: Submit week 3 feedback.

2017-09-25T00:58:53Z

Submit week 3 feedback.

Kdahlquist: /* Week 2 Feedback */ add note about electronic notebook

2017-09-20T18:56:24Z

‎Week 2 Feedback: add note about electronic notebook

← Older revision		Revision as of 02:19, 24 November 2017
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	''— [[User:Kdahlquist\|Kdahlquist]] ([[User talk:Kdahlquist\|talk]]) 14:04, 16 November 2017 (PST)''		''— [[User:Kdahlquist\|Kdahlquist]] ([[User talk:Kdahlquist\|talk]]) 14:04, 16 November 2017 (PST)''
		+
		+	== Week 9 Feedback ==
		+
		+	* The “good habit” aspects of your individual journal are completely fulfilled, and two days early too—great job!
		+	* The electronic notebook has decent detail and is well-integrated with the GRNsight testing and API exploration results.
		+	* GRNsight testing is complete with clear feedback on the results.
		+	* The provided '''bash''' script specifies the instructions for arriving at the gene data, including the portions that get substituted based on the desired gene and the final URL that yields the gene data from the assigned source.
		+
		+	=== Shared Journal ===
		+	Questions and “good habit” aspects are all fulfilled, all on-time. Favorite pages are stated alongside the reasons for these preferences.
		+
		+	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 18:19, 23 November 2017 (PST)

	== Week 7 Feedback ==		== Week 7 Feedback ==

← Older revision		Revision as of 06:19, 22 November 2017
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	''— [[User:Kdahlquist\|Kdahlquist]] ([[User talk:Kdahlquist\|talk]]) 14:04, 16 November 2017 (PST)''		''— [[User:Kdahlquist\|Kdahlquist]] ([[User talk:Kdahlquist\|talk]]) 14:04, 16 November 2017 (PST)''
		+
		+	== Week 7 Feedback ==
		+
		+	* The “good habit” aspects of your individual journal are all on point. Your electronic notebook shows excellent detail, effectively presented and organized, and your references section thoughtfully includes the multiple sources you consulted for this assignment.
		+	* All prior web page issues were addressed—great to see that!
		+	* Bootstrap grid layout and flex classes were seen in your page.
		+	* The use of collapse is noted as one of the requested “advanced Bootstrap” features.
		+	* The use of card is noted as the other “advanced Bootstrap” feature, though its usage does not really maximize its potential.
		+	* Both XML and JSON web API calls were adapted from the starter code as requested.
		+
		+	=== Shared Journal ===
		+	Questions and “good habit” aspects are fulfilled, all on-time. Good to hear that you are taking to the interdisciplinary mix well!
		+
		+	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 22:19, 21 November 2017 (PST)

	== Week 5 Feedback ==		== Week 5 Feedback ==

← Older revision		Revision as of 22:04, 16 November 2017
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	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 00:19, 16 November 2017 (PST)		—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 00:19, 16 November 2017 (PST)
		+
		+	I also want to note that Eddie did not sign his executive summary/reflection with his wiki signature. The citations in you annotated bibliography should also be added to your team page.
		+
		+	''— [[User:Kdahlquist\|Kdahlquist]] ([[User talk:Kdahlquist\|talk]]) 14:04, 16 November 2017 (PST)''

	== Week 5 Feedback ==		== Week 5 Feedback ==

← Older revision		Revision as of 08:19, 16 November 2017
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		+	== Week 11 Team Page Feedback (to address in Week 12) ==
		+
		+	Your team page hit the specifically-requested items listed in the Week 11 assignment, although the team template [[Template:Gene hAPI]] is somewhat underpopulated—continue reading to get further ideas on what can go there.
		+
		+	For [[Week 12]], let’s focus on the stated overall purpose of these pages: “This page will be the main place from which your team project will be managed. Include all of the information/links that you think will be useful for your team to organize your work and communicate with each other and with the instructors. ''Hint: the kinds of things that are on your own User pages and on the course Main page can be used as a guide.''”
		+
		+	Considering that purpose (and hint), you will also want to include the following on your team page. Imagine yourselves in deep work mode, with your team page open in a window. What information, links, and resources will you want to have available on that page at all times? Here are a few items:
		+	* A projected schedule with due dates (both for milestones already defined in the guild pages and for internal accomplishments that your team determines) and meeting times. You can cross off these dates and times as your team makes progress using the <code>s</code> tag (<s>strikeout</s>).
		+	* Communication resources (e.g., additional channels like Slack; GitHub issues; the discussion “side” of various wiki pages; etc.) that your team can use to coordinate when not face-to-face
		+	* A section with links to uploaded files, particularly for use by data analysts but really for any member of the team; this can also include a link to your GitHub branch and the project’s fork
		+	* Additional useful links—what links would be useful to always have there so that you can just click to visit them, minimizing typing? (for example, [[Template:GRNsight Gene Page Project Links]] has already been created for you—won’t that be useful to have on your page as well?)
		+	Note how these items are very similar to the content that can be seen on our own [[Main Page]]—this is not a coincidence.
		+
		+	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 00:19, 16 November 2017 (PST)
		+
	== Week 5 Feedback ==		== Week 5 Feedback ==

← Older revision		Revision as of 02:24, 22 October 2017
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		+	== Week 5 Feedback ==
		+
		+	(work in progress)
		+
		+	=== Shared Journal ===
		+	Questions and “good habit” aspects are all sufficiently fulfilled; thank you!
		+
		+	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 19:24, 21 October 2017 (PDT)
		+
	== Week 4 Feedback ==		== Week 4 Feedback ==

← Older revision		Revision as of 23:15, 13 October 2017
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	''— [[User:Kdahlquist\|Kdahlquist]] ([[User talk:Kdahlquist\|talk]]) 13:05, 10 October 2017 (PDT)''		''— [[User:Kdahlquist\|Kdahlquist]] ([[User talk:Kdahlquist\|talk]]) 13:05, 10 October 2017 (PDT)''
		+
		+	=== More Week 4 Feedback ===
		+
		+	* I want to note that you submitted both your individual and shared journal entries on time.
		+	* The level of detail in your electronic lab notebook was good. I like especially that you noted some HTML syntax in your notebook. You could have included more information about your gene, though.
		+	* You made a total of 25 edits to the wiki in the window of review and wrote something in the summary field 100% of the time--keep up the good work!
		+
		+	''— [[User:Kdahlquist\|Kdahlquist]] ([[User talk:Kdahlquist\|talk]]) 16:15, 13 October 2017 (PDT)''
		+	I want to note that Bootstrap itself is a standard library.

	== Week 3 Feedback ==		== Week 3 Feedback ==

@@ Line 15: / Line 15: @@
 * Otherwise, a clean-looking page with nice section breaks!
-''&mdash; [[User:Kdahlquist|Kdahlquist]] ([[User talk:Kdahlquist|talk]]) 13:04, 10 October 2017 (PDT)''
+''&mdash; [[User:Kdahlquist|Kdahlquist]] ([[User talk:Kdahlquist|talk]]) 13:05, 10 October 2017 (PDT)''
 == Week 3 Feedback ==

← Older revision		Revision as of 20:04, 10 October 2017
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		+	== Week 4 Feedback ==
		+
		+	I am posting partial feedback on your [[Week 4]] assignment, with respect to your favorite gene page because the [[Week 7]] assignment will build on that.
		+
		+	* Your favorite gene page had all of the required syntax and content except as follows:
		+	** You did not enclose your .html file and image inside of a folder, you only provided the .html file itself.
		+	** The HTML file should have been named after your gene, such as in "spt15.html" instead of your usernames.
		+	** Make sure to follow the convention of only using lowercase letters in filenames.
		+	** You did not actually provide the image files for your page; instead you used a URL link. Also, did you notice that one of the images was in the Russian language?!
		+	** The links for each of the gene IDs should have gone to the actual individual gene page, not just to the database's home page.
		+	** Your compare/contrast of content and presentation between the four source databases was a little brief.
		+	** Your references list is in a good APA-style format, but the link to Wikipedia was broken. You also should have provided in-text citations throughout your page.
		+	* Aesthetics of the layout were not part of this assignment, but I want to note that as you revise this page, most of the text is flush with the left side of the browser window without any buffering "white space", making it a little difficult to read.
		+	* Typically DNA and protein sequences are given in a "monospaced" or "fixed width" font, such as Courier, so the letters line up, which is what you saw on the parent databases.
		+	* Otherwise, a clean-looking page with nice section breaks!
		+
		+	''— [[User:Kdahlquist\|Kdahlquist]] ([[User talk:Kdahlquist\|talk]]) 13:04, 10 October 2017 (PDT)''
		+
	== Week 3 Feedback ==		== Week 3 Feedback ==

← Older revision		Revision as of 00:58, 25 September 2017
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		+	== Week 3 Feedback ==
		+
		+	* Everything was turned in on time—thank you! You fulfilled most of the “good habit/best practice” aspects of the assignment, including supplying comments for all 13 of the listed journal edits. The sole miss is:
		+	** Your acknowledgments section is missing the statement that the journal entry is your own work and the wiki signature after that.
		+	* You supplied an electronic notebook with this assignment, with headings to separate out the different sections of the journal. What is present is supportive of the openness and reproducibility values that we are after here: can someone reading your notebook get a clear understanding of what you did for this assignment? Do they have enough information to replicate the results that you posted on your journal page? But don’t hesitate to supply details as needed—as written, it sounds like you got everything right on the first try. Is that true? If that is the case, then great. However it is hard to tell the difference between that or perhaps you did some trial and error first, or perhaps got stuck then asked for help. This aspect improves upon the openness of your process.
		+	* Your hack-a-page work certainly fulfilled the instructions—I’m sure LMU would love to have a Netflix series made about it ''':)'''
		+	* Your list of links (3 items) was shorter than I would have hoped, given how many there were (and their variety).
		+	* Further, '''pre_text''', '''output''', and '''code''' are not IDs in the same sense that they are used in the assigned reading, particularly [http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.2001414 McMurry et al.] IDs closer to the spirit of that reading would have been better. As a network resource, '''...cgi-bin/translate...''' can be viewed as an identifier on its own, but I was also hoping that the values after '''seqdna''' in the '''cgi-bin/translate''' links would be recognized by students as IDs. You listed the '''action''' by itself, which is technically correct, but a finer grain was also present.
		+	* For the '''curl'''/'''sed''' exercise, I was hoping that students would notice the '''output''' option that can be provided along with '''pre_text''' (you did notice it as indicated above; including it in your '''curl''' command would have been the next step). This option controls how the amino acids are displayed. Supplying '''output=Verbose''' to the '''curl''' command would have obviated the need for the '''sed''' commands that “spell out” the amino acid letters. Looking for additional options like this can sometimes save us a lot of work.
		+	* Your chosen shared journal quote (and the sentiment you express after) certainly speaks to how ubiquitous the skill of coding/programming can appear to be. Indeed, I’ve noticed that some proficiency at this is helpful to anyone in almost any profession, because at a minimum it helps us to approach a problem in a constructive, step-by-step manner, whether or not the problem is a computational one.
		+
		+	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 17:58, 24 September 2017 (PDT)
		+
	== Week 2 Feedback ==		== Week 2 Feedback ==

@@ Line 8: / Line 8: @@
 * However, you did not actually give the complementary ''DNA'' sequence, as requested.  Instead, you converted the T's to U's to make an RNA sequence.  Be careful to follow the directions and give what is asked for.
 * Also, we do not use 5' and 3' to mark the ends of protein sequences.  Instead, we use N-ter and C-ter.
 * In your Acknowledgments section, you left out the required statement (see the [[Week 1]] assignment) and your wiki signature.  This will be required each week.
 * The technical language in articles from the primary literature is definitely a hurdle for students (and even for faculty from a different field), but keep with it.  Like with other fields of endeavor, it is good to take a look at the primary source.  Instead of just relying on your memory for terminology, you can always look something up online or in a text book or dictionary.  I have to do that myself when I am reading something from a different field.