User talk:Dondi - Revision history

Dondi: /* John Lopez */ Reformat and answer lifeline question.

2017-10-31T04:11:54Z

‎John Lopez: Reformat and answer lifeline question.

Johnllopez616: /* Week 9 Lifeline Q&A */ Added my question

2017-10-31T02:34:14Z

‎Week 9 Lifeline Q&A: Added my question

Dondi: /* Answer */ Minor edit.

2017-10-31T00:08:11Z

‎Answer: Minor edit.

Dondi: /* Answer */ Provide answer.

2017-10-31T00:06:51Z

‎Answer: Provide answer.

Dondi: Add some formatting.

2017-10-30T23:55:29Z

Add some formatting.

Simonwro120: syntax

2017-10-30T23:36:06Z

syntax

Simonwro120: Simon's life line to understand sending query requests to API's

2017-10-30T23:32:48Z

Simon's life line to understand sending query requests to API's

Dondi: Answer Nicole’s question.

2017-09-07T06:07:11Z

Answer Nicole’s question.

Nicolekalcic at 05:09, 7 September 2017

2017-09-07T05:09:07Z

Dondi: More answers.

2017-09-06T06:18:55Z

@@ Line 173: / Line 173: @@
 == Week 9 Lifeline Q&amp;A ==
 ===John Lopez===
 Hello! I would like to spend my lifeline clarifying what data we are supposed to return.
@@ Line 183: / Line 185: @@
 ],"executionTime":"2017.10.30 15:58::21","wasSuccessful":true,"error":null,"statusCode":200}
 Out of the two objects given in the results array, which one of these two are we supposed to return for the final product?
 === Simon &amp; Dina ===

← Older revision		Revision as of 02:34, 31 October 2017
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	== Week 9 Lifeline Q&A ==		== Week 9 Lifeline Q&A ==
		+	===John Lopez===
		+
		+	Hello! I would like to spend my lifeline clarifying what data we are supposed to return.
		+
		+	So using the command I have developed, the following comes up when I intend to search for BRO1.
		+
		+	{"results":[
		+	{"symbol":"BRO1","length":2535,"scoreType":null,"description":"Cytoplasmic class E vacuolar protein sorting (VPS) factor; coordinates deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes","jasparAccession":null,"primaryIdentifier":"S000006005","cytoLocation":null,"score":null,"jasparFamily":null,"sgdAlias":"LPF2 ASI6 NPI3 VPS31","qualifier":"Verified","functionSummary":null,"phenotypeSummary":null,"featureType":"ORF","name":"BCK1-like Resistance to Osmotic shock","featAttribute":null,"secondaryIdentifier":"YPL084W","id":1015987,"jasparClass":null,"briefDescription":"Cytoplasmic class E vacuolar protein sorting (VPS) factor","status":"Active"},
		+	{"symbol":"BRO1","length":null,"scoreType":null,"description":null,"jasparAccession":null,"primaryIdentifier":"orf19.1670","cytoLocation":null,"score":null,"jasparFamily":null,"sgdAlias":"orf19.9239 IPF25590.1 IPF8087.2 Contig4-3069_0020 orf6.5745 CA3475 CaO19.9239 CaO19.1670","qualifier":null,"functionSummary":null,"phenotypeSummary":null,"featureType":null,"name":null,"featAttribute":null,"secondaryIdentifier":null,"id":66043773,"jasparClass":null,"briefDescription":"Class E vacuolar protein sorting factor; role in transport from multivesicular body to vacuole; not involved in Rim101 pathway; macrophage and pseudohyphal-repressed; flow model biofilm induced","status":null}
		+	],"executionTime":"2017.10.30 15:58::21","wasSuccessful":true,"error":null,"statusCode":200}
		+
		+	Out of the two objects given in the results array, which one of these two are we supposed to return for the final product?
		+

	=== Simon & Dina ===		=== Simon & Dina ===

@@ Line 214: / Line 214: @@
 Greetings,
-First off, I should clarify that ''you are not expected to write code'' for this assignment. What you did in '''curl''' is correct and suffices here. However, since you did specify some code, I will also answer on that level: yes, that code is correct. The code ''is'' getting the same data that '''curl''' is getting. The issue you are seeing is that ''the '''done''' clause needs to be modified to actually do something with the <code>results</code>. For example:
+First off, I should clarify that ''you are not expected to write code'' for this assignment. What you did in '''curl''' is correct and suffices here. However, since you did specify some code, I will also answer on that level: yes, that code is correct. The code ''is'' getting the same data that '''curl''' is getting. The issue you are seeing is that ''the '''done''' clause needs to be modified to actually do something with the'' <code>results</code> parameter. For example:
   $.getJSON("https://yeastmine.yeastgenome.org/yeastmine/service/data/Gene", {

← Older revision		Revision as of 00:06, 31 October 2017
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	==== Answer ====		==== Answer ====

−	(in ~~progress~~)	+	Greetings,
		+
		+	First off, I should clarify that ''you are not expected to write code'' for this assignment. What you did in '''curl''' is correct and suffices here. However, since you did specify some code, I will also answer on that level: yes, that code is correct. The code ''is'' getting the same data that '''curl''' is getting. The issue you are seeing is that ''the '''done''' clause needs to be modified to actually do something with the <code>results</code>. For example:
		+
		+	$.getJSON("https://yeastmine.yeastgenome.org/yeastmine/service/data/Gene", {
		+	symbol: "SPT15"
		+	}).done(results => console.log(results));
		+
		+	Note how we have changed the '''done''' function to <code>results => console.log(results)</code>. This will display the <code>results</code> data on the console. If you execute this, you should see the same data that you are seeing via '''curl'''.
		+
		+	The underlying principle here is: if you are trying to adapt someone else’s code, ''make sure you are clear on what the entire piece of code does''. The original function that was in there, <code>results => searchResultContainer.empty()</code>, does nothing to display your results. In fact, it doesn't do anything to the data; it just empties out whatever elements are in the <code>searchResultContainer</code> variable. Modifying it even to a simple <code>console.log</code> shows you that you were indeed doing the right thing.
		+
		+	The other way that you could have assured yourself that the code was correct was by looking in the ''Network'' tab of the browser developer tools. With that tab open, you would have seen your request go out, and you would then have seen the incoming response as being the same one you saw in '''curl'''.
		+
		+	Hope that answers your lifeline question.
		+
		+	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 17:06, 30 October 2017 (PDT)

@@ Line 170: / Line 170: @@
 —[[User:Dondi|Dondi]] ([[User talk:Dondi|talk]]) 23:07, 6 September 2017 (PDT)
 </blockquote>
 ----
@@ Line 203: / Line 209: @@
 HELP ME SEMPAI!!!!<br>
 [[User:Simonwro120|Simonwro120]] ([[User talk:Simonwro120|talk]]) 16:32, 30 October 2017 (PDT)

@@ Line 172: / Line 172: @@
 ----
-Hey Dondi! this is the official lifeline from Dina/Simon being cashed in (Dina said I could use it for IxD purposes if that okay with you haha!)
+Hey Dondi! this is the official lifeline from Dina/Simon being cashed in (Dina said I could use it for IxD purposes if that okay with you haha!)<br>
 Im using:
 -------------------------
-searchButton.click(() =>
+ searchButton.click(() =>
-    $.getJSON("https://yeastmine.yeastgenome.org/yeastmine/service/data/Gene", {
+     $.getJSON("https://yeastmine.yeastgenome.org/yeastmine/service/data/Gene", {
-            symbol: searchTerm.val()
+             symbol: searchTerm.val()
-     }).done(results => searchResultContainer.empty())
+      }).done(results => searchResultContainer.empty())
-);
+ );
 -------------------------
-Should this not return all the data related to the Gene symbol that is entered by the user (i.e "searchTerm.val()")?
+Should this not return all the data related to the Gene symbol that is entered by the user (i.e "searchTerm.val()")?<br>
-I don't know what it is and I'm sure its something small but I just cant get any info to go into my html page.
+I don't know what it is and I'm sure its something small but I just cant get any info to go into my html page.<br>
 I know for a fact that the:
 -------------------------
-curl https://yeastmine.yeastgenome.org/yeastmine/service/data/Gene?symbol=SPT15
+ curl https://yeastmine.yeastgenome.org/yeastmine/service/data/Gene?symbol=SPT15
 -------------------------
-returns:
+Returns:
 -------------------------
-{"results":[
+ {"results":[
-{"symbol":"SPT15","length":723,"scoreType":null,"description":"TATA-binding protein (TBP); general transcription factor that interacts with other factors to form the preinitiation complex at promoters; essential for viability, highly conserved; yeast gene can complement mutations in human homolog TBP","jasparAccession":"MA0386.1","primaryIdentifier":"S000000950","cytoLocation":null,"score":null,"jasparFamily":"TATA-binding","sgdAlias":"TATA-binding protein TBP TBP1 BTF1","qualifier":"Verified","functionSummary":"DNA- and chromatin-binding general transcription factor that recruits other transcription factors in preinitiation complex assembly for RNA polymerases II and III, and rDNA transcription by RNA polymerase I; subunit of TFIID and TFIIIB; also involved in the chromosomal incorporation of transposable elements|uniprot_proteome=UP000002311","phenotypeSummary":"Essential gene; conditional mutants grow slowly, are sensitive to heat and DNA-damaging agent MMS; some mutations increase ethanol tolerance; heterozygous diploid null is haploinsufficient; overexpression interferes with silencing","featureType":"ORF","name":"SuPpressor of Ty insertions","featAttribute":null,"secondaryIdentifier":"YER148W","id":1009998,"jasparClass":"Beta-sheet","briefDescription":"TATA-binding protein (TBP)","status":"Active"}
+ {"symbol":"SPT15","length":723,"scoreType":null,"description":"TATA-binding protein (TBP); general transcription factor that interacts with other factors to form the preinitiation complex
-],"executionTime":"2017.10.30 16:00::46","wasSuccessful":true,"error":null,"statusCode":200}
+ at promoters; essential for viability, highly conserved; yeast gene can complement mutations in human homolog
 --------------------------
-So why is it that I cant get the information from the query's return in my html page?
+So why is it that I cant get the information from the query's return in my html page?<br>
 HELP ME SEMPAI!!!!<br>
 [[User:Simonwro120|Simonwro120]] ([[User talk:Simonwro120|talk]]) 16:32, 30 October 2017 (PDT)

← Older revision		Revision as of 06:07, 7 September 2017
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	----		----
	Hi Dr Dondi! As a Batman fan, and presumably a DC fan, did you get the chance to see Wonder Woman? If you did, what did you think of it? [[User:Nicolekalcic\|Nicolekalcic]] ([[User talk:Nicolekalcic\|talk]]) 22:09, 6 September 2017 (PDT)		Hi Dr Dondi! As a Batman fan, and presumably a DC fan, did you get the chance to see Wonder Woman? If you did, what did you think of it? [[User:Nicolekalcic\|Nicolekalcic]] ([[User talk:Nicolekalcic\|talk]]) 22:09, 6 September 2017 (PDT)
		+
		+	<blockquote>
		+	I enjoyed ''Wonder Woman'' a lot, and certainly agree that it deserves all of the acclaim that it has gotten. It works on every level, and has significant behind-the-scenes milestones as well. Plus, its message and heroine have turned out to be unexpectedly timely. It most certainly sets a high bar for future films in the genre!
		+
		+	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 23:07, 6 September 2017 (PDT)
		+	</blockquote>

← Older revision		Revision as of 05:09, 7 September 2017
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	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 23:18, 5 September 2017 (PDT)		—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 23:18, 5 September 2017 (PDT)
	</blockquote>		</blockquote>
		+
		+
		+	----
		+	Hi Dr Dondi! As a Batman fan, and presumably a DC fan, did you get the chance to see Wonder Woman? If you did, what did you think of it? [[User:Nicolekalcic\|Nicolekalcic]] ([[User talk:Nicolekalcic\|talk]]) 22:09, 6 September 2017 (PDT)

← Older revision		Revision as of 06:18, 6 September 2017
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	Hi Dr. Dionisio! Did your decide to work at LMU because of your undergraduate experience here or was there another motivation for working here? Also, did you enjoy going to school here as much as you like teaching here? Thank you for your time! [[User:Dbashour\|Dbashour]] ([[User talk:Dbashour\|talk]]) 12:57, 5 September 2017 (PDT)		Hi Dr. Dionisio! Did your decide to work at LMU because of your undergraduate experience here or was there another motivation for working here? Also, did you enjoy going to school here as much as you like teaching here? Thank you for your time! [[User:Dbashour\|Dbashour]] ([[User talk:Dbashour\|talk]]) 12:57, 5 September 2017 (PDT)

		+	<blockquote>
		+	The alma mater factor certainly helped, plus the notion of coming back to now work with a lot of former professors as colleagues. However, a major factor as well was the shift in emphasis toward more teaching. I came to LMU from a position at UCLA that was entirely research-driven—as in, if you don’t get a grant to fund you, then your salary is at stake! Ultimately not as satisfying. Research is a part of the academic endeavor, but I preferred to have more teaching in the mix…and a more stable livelihood to boot.
		+
		+	As for going to school here, yes, I must say that felt too short. I had a major blast in college and wouldn’t have minded staying longer if I weren’t obligated to move on with my life, haha!
		+
		+	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 23:18, 5 September 2017 (PDT)
		+	</blockquote>
		+
		+	----
	Hi Dr. Dondi! Seeing as how you're in Computer Science, and it's typical that many of us enjoy science fiction: What is your favorite Sci-Fi movie and why? [[User:ArashLari\|ArashLari]] ([[User talk:ArashLari\|talk]]) 14:48, 5 September 2017 (PDT)		Hi Dr. Dondi! Seeing as how you're in Computer Science, and it's typical that many of us enjoy science fiction: What is your favorite Sci-Fi movie and why? [[User:ArashLari\|ArashLari]] ([[User talk:ArashLari\|talk]]) 14:48, 5 September 2017 (PDT)
		+
		+	<blockquote>
		+	Hm, very hard to pick a sci-fi movie favorite…there have certainly been good ones but none I think that have reached the level of my favorite science fiction books. ''Blade Runner'' is up there, as are ''2001'' and ''The Matrix''. I would have liked to have seen better adaptations of ''Dune'', ''Ender’s Game'', and ''Hitchhiker’s Guide to the Galaxy''; ''Childhood’s End'' was not bad though that was more of a limited series and not a film. Finally, one of my favorite science fiction works has not yet been adapted into a film: the ''Foundation'' series by Isaac Asimov. That would be great to see, but I realize that it would be hard to do well as a film.
		+
		+	—[[User:Dondi\|Dondi]] ([[User talk:Dondi\|talk]]) 23:18, 5 September 2017 (PDT)
		+	</blockquote>