Difference between revisions of "Cwong34 Week 9"

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=GRNsight=
 
=GRNsight=
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 +
[https://github.com/dondi/GRNsight/blob/beta/test-files/demo-files/21-genes_50-edges_Dahlquist-data_estimation_output.xlsx XLSX file]
 +
 +
[https://github.com/dondi/GRNsight/blob/beta/test-files/demo-files/21-genes_31-edges_Schade-data_input.sif SIF file]
 +
 +
[https://github.com/dondi/GRNsight/blob/beta/test-files/demo-files/21-genes_31-edges_Schade-data_estimation_output_unweighted.graphml GRAPHML file]
 +
 +
Last Updated: 2017-10-23
 +
; Test 1
 +
: Instructions:
 +
:* Load Graph - File Menu -> Open
 +
: Results:
 +
:* GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
 +
: '''Conclusions:'''
 +
:*
 +
; Test 2
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import SIF
 +
: Results:
 +
:* GRNsight should lay out a network graph from the SIF file if there are no errors in the file
 +
: '''Conclusions:'''
 +
:*
 +
; Test 3
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import GraphML
 +
: Results:
 +
:* GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
 +
: '''Conclusions:'''
 +
:*
 +
; Test 4
 +
: Instructions:
 +
:* Load Graph - File Menu -> Open
 +
:* D-Pad Control - Click Right Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the left
 +
: '''Conclusions:'''
 +
:*
 +
; Test 5
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import SIF
 +
:* D-Pad Control - Click Right Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the SIF file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the left
 +
: '''Conclusions:'''
 +
:*
 +
; Test 6
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import GraphML
 +
:* D-Pad Control - Click Right Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the left
 +
: '''Conclusions:'''
 +
:*
 +
; Test 7
 +
: Instructions:
 +
:* Load Graph - File Menu -> Open
 +
:* D-Pad Control - Click Left Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the right
 +
: '''Conclusions:'''
 +
:*
 +
; Test 8
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import SIF
 +
:* D-Pad Control - Click Left Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the SIF file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the right
 +
: '''Conclusions:'''
 +
:*
 +
; Test 9
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import GraphML
 +
:* D-Pad Control - Click Left Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the right
 +
: '''Conclusions:'''
 +
:*
 +
; Test 10
 +
: Instructions:
 +
:* Load Graph - File Menu -> Open
 +
:* D-Pad Control - Click Up Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift down
 +
: '''Conclusions:'''
 +
:*
 +
; Test 11
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import SIF
 +
:* D-Pad Control - Click Up Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the SIF file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift down
 +
: '''Conclusions:'''
 +
:*
 +
; Test 12
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import GraphML
 +
:* D-Pad Control - Click Up Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift down
 +
: '''Conclusions:'''
 +
:*
 +
; Test 13
 +
: Instructions:
 +
:* Load Graph - File Menu -> Open
 +
:* D-Pad Control - Click Down Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift up
 +
: '''Conclusions:'''
 +
:*
 +
; Test 14
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import SIF
 +
:* D-Pad Control - Click Down Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the SIF file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift up
 +
: '''Conclusions:'''
 +
:*
 +
; Test 15
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import GraphML
 +
:* D-Pad Control - Click Down Arrow
 +
: Results:
 +
:* GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should shift up
 +
: '''Conclusions:'''
 +
:*
 +
; Test 16
 +
: Instructions:
 +
:* Load Graph - File Menu -> Open
 +
:* D-Pad Control - Click Center Button
 +
: Results:
 +
:* GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should move to the center of the bounding box (note that it is not the same thing as the viewport
 +
: '''Conclusions:'''
 +
:*
 +
; Test 17
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import SIF
 +
:* D-Pad Control - Click Center Button
 +
: Results:
 +
:* GRNsight should lay out a network graph from the SIF file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should move to the center of the bounding box (note that it is not the same thing as the viewport
 +
: '''Conclusions:'''
 +
:*
 +
; Test 18
 +
: Instructions:
 +
:* Load Graph - File Menu -> Import GraphML
 +
:* D-Pad Control - Click Center Button
 +
: Results:
 +
:* GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
 +
:* if "Restrict Graph to Viewport" is Unchecked., The graph should move to the center of the bounding box (note that it is not the same thing as the viewport
 +
: '''Conclusions:'''
 +
:*
  
 
=API Exploration=
 
=API Exploration=

Revision as of 21:18, 28 October 2017

GRNsight

XLSX file

SIF file

GRAPHML file

Last Updated: 2017-10-23

Test 1
Instructions:
  • Load Graph - File Menu -> Open
Results:
  • GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
Conclusions:
Test 2
Instructions:
  • Load Graph - File Menu -> Import SIF
Results:
  • GRNsight should lay out a network graph from the SIF file if there are no errors in the file
Conclusions:
Test 3
Instructions:
  • Load Graph - File Menu -> Import GraphML
Results:
  • GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
Conclusions:
Test 4
Instructions:
  • Load Graph - File Menu -> Open
  • D-Pad Control - Click Right Arrow
Results:
  • GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the left
Conclusions:
Test 5
Instructions:
  • Load Graph - File Menu -> Import SIF
  • D-Pad Control - Click Right Arrow
Results:
  • GRNsight should lay out a network graph from the SIF file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the left
Conclusions:
Test 6
Instructions:
  • Load Graph - File Menu -> Import GraphML
  • D-Pad Control - Click Right Arrow
Results:
  • GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the left
Conclusions:
Test 7
Instructions:
  • Load Graph - File Menu -> Open
  • D-Pad Control - Click Left Arrow
Results:
  • GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the right
Conclusions:
Test 8
Instructions:
  • Load Graph - File Menu -> Import SIF
  • D-Pad Control - Click Left Arrow
Results:
  • GRNsight should lay out a network graph from the SIF file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the right
Conclusions:
Test 9
Instructions:
  • Load Graph - File Menu -> Import GraphML
  • D-Pad Control - Click Left Arrow
Results:
  • GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift to the right
Conclusions:
Test 10
Instructions:
  • Load Graph - File Menu -> Open
  • D-Pad Control - Click Up Arrow
Results:
  • GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift down
Conclusions:
Test 11
Instructions:
  • Load Graph - File Menu -> Import SIF
  • D-Pad Control - Click Up Arrow
Results:
  • GRNsight should lay out a network graph from the SIF file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift down
Conclusions:
Test 12
Instructions:
  • Load Graph - File Menu -> Import GraphML
  • D-Pad Control - Click Up Arrow
Results:
  • GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift down
Conclusions:
Test 13
Instructions:
  • Load Graph - File Menu -> Open
  • D-Pad Control - Click Down Arrow
Results:
  • GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift up
Conclusions:
Test 14
Instructions:
  • Load Graph - File Menu -> Import SIF
  • D-Pad Control - Click Down Arrow
Results:
  • GRNsight should lay out a network graph from the SIF file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift up
Conclusions:
Test 15
Instructions:
  • Load Graph - File Menu -> Import GraphML
  • D-Pad Control - Click Down Arrow
Results:
  • GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should shift up
Conclusions:
Test 16
Instructions:
  • Load Graph - File Menu -> Open
  • D-Pad Control - Click Center Button
Results:
  • GRNsight should lay out a network graph from the Excel workbook if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should move to the center of the bounding box (note that it is not the same thing as the viewport
Conclusions:
Test 17
Instructions:
  • Load Graph - File Menu -> Import SIF
  • D-Pad Control - Click Center Button
Results:
  • GRNsight should lay out a network graph from the SIF file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should move to the center of the bounding box (note that it is not the same thing as the viewport
Conclusions:
Test 18
Instructions:
  • Load Graph - File Menu -> Import GraphML
  • D-Pad Control - Click Center Button
Results:
  • GRNsight should lay out a network graph from the GraphML file if there are no errors in the file
  • if "Restrict Graph to Viewport" is Unchecked., The graph should move to the center of the bounding box (note that it is not the same thing as the viewport
Conclusions:

API Exploration

Acknowledgmenets

References

cwong34

BIOL/CMSI 367-01: Biological Databases Fall 2017

Assignments

Journal Entries:

Shared Journals:

Group Project