Difference between revisions of "Emmatyrnauer Week 2"

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(assignment week 2 entry)
(fixing homework mistake and syntax)
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==Strand Provided==
 
==Strand Provided==
 
5'- cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta -3’
 
5'- cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta -3’
 +
===mRNA synthesized from this strand===
 +
3'- gcauacgauuaugguacaaggcgcauauugggucggcggucaaggcgaccgccguaaaau -5'
 +
====3 reading frames read 5' to 3' on the mRNA====
 +
*stop-san-ala-ala-ser-gly-thr-gly-gly-trp-val-ile-arg-gly-thr-gly-tyr-stop-his-thr
 +
*lys-met-pro-pro-ala-glu-leu-ala-ala-gly-leu-tyr-ala-glu-his-gly-ile-ser-ile
 +
*lys-cys-arg-gln-arg-asn-trp-arg-leu-gly-tyr-thr-arg-asn-met-val-leu-ala-tyr
  
 
==Complementary strand==
 
==Complementary strand==
 
3’- gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat -5’
 
3’- gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat -5’
 
+
===mRNA synthesized from this strand===
==6 reading frames==
+
5'- cguaugcuaauaccauguuccgcguauaacccagccgccaguuccgcuggcggcauuuua -3’
 
+
====3 reading frames read 5' to 3' on the mRNA====
===From left to right===
+
arg-met-leu-ile-pro-cys-ser-ala-tyr-asn-pro-ala-ala-ser-ser-ala-gly-glt-ile-leu
*ala-try-asp-tyr-gly-thr-arg-arg-ile-leu-gly-arg-arg-ser-arg-arg-pro-pro-stop-asn
+
val-cys-stop-tyr-his-val-pro-arg-ile-thr-gln-pro-pro-val-pro-leu-ala-ala-phe
*his-thr-ile-met-val-gln-gly-ala-tyr-trp-cal-gly-gly-gln-gly-asp-arg-arg-lys
+
tyr-ala-asn-thr-met-phe-arg-val-stop-pro-ser-arg-gln-phe-arg-trp-arg-his-phe
*ile-arg-leu-trp-tyr-lys-ala-his-ile-gly-ser-ala-val-lys-ala-thr-ala-val-lys
 
 
 
===From right to left===
 
*stop-san-ala-ala-ser-gly-thr-gly-gly-trp-val-ile-arg-gly-thr-gly-tyr-stop-his-thr
 
*lys-met-pro-pro-ala-glu-leu-ala-ala-gly-leu-tyr-ala-glu-his-gly-ile-ser-ile
 
*lys-cys-arg-gln-arg-asn-trp-arg-leu-gly-tyr-thr-arg-asn-met-val-leu-ala-tyr
 

Revision as of 05:33, 11 September 2017

Strand Provided

5'- cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta -3’

mRNA synthesized from this strand

3'- gcauacgauuaugguacaaggcgcauauugggucggcggucaaggcgaccgccguaaaau -5'

3 reading frames read 5' to 3' on the mRNA

  • stop-san-ala-ala-ser-gly-thr-gly-gly-trp-val-ile-arg-gly-thr-gly-tyr-stop-his-thr
  • lys-met-pro-pro-ala-glu-leu-ala-ala-gly-leu-tyr-ala-glu-his-gly-ile-ser-ile
  • lys-cys-arg-gln-arg-asn-trp-arg-leu-gly-tyr-thr-arg-asn-met-val-leu-ala-tyr

Complementary strand

3’- gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat -5’

mRNA synthesized from this strand

5'- cguaugcuaauaccauguuccgcguauaacccagccgccaguuccgcuggcggcauuuua -3’

3 reading frames read 5' to 3' on the mRNA

arg-met-leu-ile-pro-cys-ser-ala-tyr-asn-pro-ala-ala-ser-ser-ala-gly-glt-ile-leu val-cys-stop-tyr-his-val-pro-arg-ile-thr-gln-pro-pro-val-pro-leu-ala-ala-phe tyr-ala-asn-thr-met-phe-arg-val-stop-pro-ser-arg-gln-phe-arg-trp-arg-his-phe