Difference between revisions of "The Comparative Toxicogenomics Database"
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==General Information== | ==General Information== | ||
| − | # | + | #[http://ctdbase.org/ The Comparative Toxicogenomics Database] |
#This database stores information on how environmental toxins affect our health. | #This database stores information on how environmental toxins affect our health. | ||
| − | ## "It provides manually curated information about chemical–gene/protein interactions, chemical–disease and gene–disease relationships." | + | ## "It provides manually curated information about chemical–gene/protein interactions, chemical–disease and gene–disease relationships." [http://ctdbase.org/about/ About CTDbase] A complete list of types of data includes: |
##*Chemicals | ##*Chemicals | ||
##*Diseases | ##*Diseases | ||
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##*Exposure Studies Query | ##*Exposure Studies Query | ||
##*Exposure Details Query | ##*Exposure Details Query | ||
| − | ## The data is manually curated by a team of 5 database | + | ## The data is manually curated by a team of 5 database [http://ctdbase.org/about/personnel.jsp personnel]. This database has secondary [http://ctdbase.org/about/dataStatus.go data] integrated from the following resources: |
##*BioGRID (3.4.151 release) | ##*BioGRID (3.4.151 release) | ||
##*ChemIDplus® (as of August 18, 2017) | ##*ChemIDplus® (as of August 18, 2017) | ||
| Line 25: | Line 25: | ||
##*PubMed® (as of August 18, 2017) | ##*PubMed® (as of August 18, 2017) | ||
##*Reactome (as of August 18, 2017) | ##*Reactome (as of August 18, 2017) | ||
| − | #CTD is a public database maintained by a team of 10 individuals, coming from North Carolina State University ( | + | #CTD is a public database maintained by a team of 10 individuals, coming from North Carolina State University ([https://www.ncsu.edu/ NCSU]), the Mount Desert Island Biological Laboratory ([http://www.mdibl.org/ MDIBL]), and remotely located biocurators. [http://ctdbase.org/help/faq/?p=5800169 FAQ] |
| − | #CTD recieves funding from the National Institute of Environmental Health Sciences ( | + | #CTD recieves funding from the National Institute of Environmental Health Sciences ([http://www.niehs.nih.gov/ NIEHS]). Specific grant numbers can be found on the CTD's [http://ctdbase.org/about/funding.jsp funding] page. |
==Scientific Quality== | ==Scientific Quality== | ||
Revision as of 19:18, 29 September 2017
Contents
General Information
- The Comparative Toxicogenomics Database
- This database stores information on how environmental toxins affect our health.
- "It provides manually curated information about chemical–gene/protein interactions, chemical–disease and gene–disease relationships." About CTDbase A complete list of types of data includes:
- Chemicals
- Diseases
- Genes
- Chemical-Gene Interactions
- References
- Gene Ontology
- Pathways
- Organisms
- Batch Query
- Exposure Studies Query
- Exposure Details Query
- The data is manually curated by a team of 5 database personnel. This database has secondary data integrated from the following resources:
- BioGRID (3.4.151 release)
- ChemIDplus® (as of August 18, 2017)
- DrugBank (as of August 18, 2017)
- GO (as of August 18, 2017)
- KEGG (as of August 18, 2017)
- MeSH® (2016 MeSH release)
- NCBI Gene (as of August 18, 2017)
- NCBI Taxonomy (as of August 18, 2017)
- PubMed® (as of August 18, 2017)
- Reactome (as of August 18, 2017)
- "It provides manually curated information about chemical–gene/protein interactions, chemical–disease and gene–disease relationships." About CTDbase A complete list of types of data includes:
- CTD is a public database maintained by a team of 10 individuals, coming from North Carolina State University (NCSU), the Mount Desert Island Biological Laboratory (MDIBL), and remotely located biocurators. FAQ
- CTD recieves funding from the National Institute of Environmental Health Sciences (NIEHS). Specific grant numbers can be found on the CTD's funding page.
Scientific Quality
General Utility
Summary Judgement
Electronic Notebook
Acknowledgements
References
Useful Links
| Category | Links |
|---|---|
| Interwiki | Main Page Katie Wright Course schedule Lights, Camera, InterACTION! |
| Katie Wright Weekly Assignment |
Week 2 Week 3 Week 4 Week 5 Week 6 Week 7 Week 8 Week 9🎃 Week 10 Week 11 Week 12 Week 13 Week 14 Week 15 |
| Weekly Assignment Instructions |
Week 1 Week 2 Week 3 Week 4 Week 5 Week 6 Week 7 Week 8 Week 9 Week 10 Week 11 Week 12 Week 14 Week 15 |
| Class Journals | Week 1 Week 2 Week 3 Week 4 Week 5 Week 6 Week 7 Week 8 Week 9 Week 10 Week 11 Week 12 Week 13 Week 14 |
