Difference between revisions of "Emmatyrnauer Week 11"

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(→‎Electronic Notebook: links to possible papers)
(→‎Electronic Notebook: progress making bibliography)
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==Electronic Notebook==
 
==Electronic Notebook==
 +
 +
Example:
 +
Schade, B., Jansen, G., Whiteway, M., Entian, K.D., & Thomas, D.Y. (2004). Cold Adaptation in Budding Yeast.  ''Molecular Biology of the Cell'', 15, 5492-5502.  doi:  10.1091/mbc.E04-03-0167
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* PubMed Abstract:  http://www.ncbi.nlm.nih.gov/pubmed/15483057
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* PubMed Central:  http://www.ncbi.nlm.nih.gov/pmc/articles/PMC532028/
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* Publisher Full Text (HTML):  http://www.molbiolcell.org/content/15/12/5492.long
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* Publisher Full Text (PDF):  http://www.molbiolcell.org/content/15/12/5492.full.pdf+html
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* Copyright:  2004 by the American Society for Cell Biology (information found on PDF version of article); article is not Open Access, but is freely available 2 months after publication
 +
* Publisher:  American Society for Cell Biology (scientific society)
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* Availability:  in print and online
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* Did LMU pay a fee for this article: no
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 +
Paper 1:
 +
Homma, T., Iwahashi, H., & Komatsu, Y. (2003). Yeast gene expression during growth at low temperature. Cryobiology, 46(3), 230-237.
 +
* PubMed Abstract:  https://www.ncbi.nlm.nih.gov/pubmed/12818212
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* PubMed Central: 
 +
* Publisher Full Text (HTML): 
 +
* Publisher Full Text (PDF): 
 +
* Copyright:
 +
* Publisher: 
 +
* Availability:
 +
* Did LMU pay a fee for this article:
 +
 +
Paper 2:
 +
Lashkari, D. A., DeRisi, J. L., McCusker, J. H., Namath, A. F., Gentile, C., Hwang, S. Y., ... & Davis, R. W. (1997). Yeast microarrays for genome wide parallel genetic and gene expression analysis. Proceedings of the National Academy of Sciences, 94(24), 13057-13062.
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* PubMed Abstract:  https://www.ncbi.nlm.nih.gov/pubmed/9371799
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* PubMed Central:  https://www.ncbi.nlm.nih.gov/pmc/articles/PMC24262/
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* Publisher Full Text (HTML):  http://www.pnas.org/content/94/24/13057.long
 +
* Publisher Full Text (PDF):  http://www.pnas.org/content/94/24/13057.full.pdf
 +
* Copyright:
 +
* Publisher: 
 +
* Availability:
 +
* Did LMU pay a fee for this article:
 +
 +
 +
 +
You must use these three databases/tools to find the references that you include in your bibliography:  PubMed, GoogleScholar, and Web of Science. Answer the following questions as part of your assignment:
 +
* Use a keyword search for the first three databases/tools and answer the following: 
 +
** PubMed
 +
*** What original keyword(s) did you use?  How many results did you get?
 +
*** Which terms in which combinations were most useful to narrow down the search?  How many results did you get after narrowing the search?
 +
** Google Scholar
 +
*** What original keyword(s) did you use?  How many results did you get?
 +
*** Which terms in which combinations were most useful to narrow down the search?  How many results did you get after narrowing the search?
 +
** Web of Science
 +
*** What original keyword(s) did you use?  How many results did you get?
 +
*** Which terms in which combinations were most useful to narrow down the search?  How many results did you get after narrowing the search?
 +
* Use the advanced search functions for each of these three databases/tools and answer the following: 
 +
** PubMed
 +
*** Which advanced search functions were most useful to narrow down the search?  How many results did you get?
 +
** Google Scholar
 +
*** Which advanced search functions were most useful to narrow down the search?  How many results did you get?
 +
** Web of Science
 +
*** Which advanced search functions were most useful to narrow down the search?  How many results did you get?
 +
** Perform a prospective search on the following three review articles in Web of Science and answer the following:
 +
*** Aguilera, J., Randez-Gil, F., & Prieto, J.A. (2007).  Cold Response in Saccharomyces cerevisiae:  New Functions for Old Mechanisms.  FEMS Microbiological Reviews,  31, 327–341.  doi: 10.1111/j.1574-6976.2007.00066.x
 +
**** How many articles does this article cite?
 +
**** How many articles cite this article?
 +
*** Al-Fageeh, M.B. & Smales, C.M. (2006).  Control and Regulation of the Cellular Responses to Cold Shock:  the Responses in Yeast and Mammalian Systems.  Biochemical Journal, 397, 247–259.  doi:  10.1042/BJ20060166
 +
**** How many articles does this article cite?
 +
**** How many articles cite this article?
 +
*** Thieringer, H.A., Jones, P.G.,& Inouye, M. (1998).  Cold shock and adaptation.  BioEssays, 20, 49–57.  doi: 10.1002/(SICI)1521-1878(199801)20:1<49::AID-BIES8>3.0.CO;2-N
 +
**** How many articles does this article cite?
 +
**** How many articles cite this article?
 +
 +
 +
 +
 +
 
http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub
 
http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub
 
http://www.pnas.org/content/94/24/13057.full
 
http://www.pnas.org/content/94/24/13057.full

Revision as of 06:28, 12 November 2017

Electronic Notebook

Example: Schade, B., Jansen, G., Whiteway, M., Entian, K.D., & Thomas, D.Y. (2004). Cold Adaptation in Budding Yeast. Molecular Biology of the Cell, 15, 5492-5502. doi: 10.1091/mbc.E04-03-0167

Paper 1: Homma, T., Iwahashi, H., & Komatsu, Y. (2003). Yeast gene expression during growth at low temperature. Cryobiology, 46(3), 230-237.

Paper 2: Lashkari, D. A., DeRisi, J. L., McCusker, J. H., Namath, A. F., Gentile, C., Hwang, S. Y., ... & Davis, R. W. (1997). Yeast microarrays for genome wide parallel genetic and gene expression analysis. Proceedings of the National Academy of Sciences, 94(24), 13057-13062.


You must use these three databases/tools to find the references that you include in your bibliography: PubMed, GoogleScholar, and Web of Science. Answer the following questions as part of your assignment:

  • Use a keyword search for the first three databases/tools and answer the following:
    • PubMed
      • What original keyword(s) did you use? How many results did you get?
      • Which terms in which combinations were most useful to narrow down the search? How many results did you get after narrowing the search?
    • Google Scholar
      • What original keyword(s) did you use? How many results did you get?
      • Which terms in which combinations were most useful to narrow down the search? How many results did you get after narrowing the search?
    • Web of Science
      • What original keyword(s) did you use? How many results did you get?
      • Which terms in which combinations were most useful to narrow down the search? How many results did you get after narrowing the search?
  • Use the advanced search functions for each of these three databases/tools and answer the following:
    • PubMed
      • Which advanced search functions were most useful to narrow down the search? How many results did you get?
    • Google Scholar
      • Which advanced search functions were most useful to narrow down the search? How many results did you get?
    • Web of Science
      • Which advanced search functions were most useful to narrow down the search? How many results did you get?
    • Perform a prospective search on the following three review articles in Web of Science and answer the following:
      • Aguilera, J., Randez-Gil, F., & Prieto, J.A. (2007). Cold Response in Saccharomyces cerevisiae: New Functions for Old Mechanisms. FEMS Microbiological Reviews, 31, 327–341. doi: 10.1111/j.1574-6976.2007.00066.x
        • How many articles does this article cite?
        • How many articles cite this article?
      • Al-Fageeh, M.B. & Smales, C.M. (2006). Control and Regulation of the Cellular Responses to Cold Shock: the Responses in Yeast and Mammalian Systems. Biochemical Journal, 397, 247–259. doi: 10.1042/BJ20060166
        • How many articles does this article cite?
        • How many articles cite this article?
      • Thieringer, H.A., Jones, P.G.,& Inouye, M. (1998). Cold shock and adaptation. BioEssays, 20, 49–57. doi: 10.1002/(SICI)1521-1878(199801)20:1<49::AID-BIES8>3.0.CO;2-N
        • How many articles does this article cite?
        • How many articles cite this article?



http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub http://www.pnas.org/content/94/24/13057.full

Acknowledgements

References

Links

  1. My User Page
  2. List of Assignments
  3. List of Journal Entries
  4. List of Shared Journal Entries
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