Difference between revisions of "Emma's Individual Statement"

Revision as of 05:27, 14 December 2017

Individual Assessment and Reflection

Statement of Work

Describe exactly what you did on the project (provide links to work).

• For this project I served as the data analyst. During the first week (week 11) I started off by creating an annotated bibliography of scientific journal articles dealing with yeast, cold shock, and microarray data. This bibliography was created with my group's project manager, Katie, and can be accessed on Emmatyrnauer Week 11. This week also consisted of constructing our group's individual page, Lights, Camera, InterACTION!.
• During week 12, Katie and I worked on our journal club presentation. Each of us constructed individual outlines of the paper we had been assigned and then met up to write and divide up our journal club presentation. Prior to the class during which we were supposed to present, we met up to practice a few times. The outline that I wrote and the presentation that we made can be accessed on Emmatyrnauer Week 12. This was also the week that I completed all of the corrections that I needed to make on my week 8 individual page (Emmatyrnauer Week 8) and my week 10 individual page (Emmatyrnauer Week 10). Dr. Dahlquist had listed out all of the necessary corrections on the talk page of my user page (User:Emmatyrnauer), so I went through this list and checked off corrections as they were made.
• We had week 13 off due to Thanksgiving, yay! :)
• During week 14, I completed the week 10 data analysis including using Yeastract to infer transcription factors and visualizing my gene regulatory network with GRNsight. Documentation of procedure, resulting files, and conclusion can be accessed on Emmatyrnauer Week 14.
• Week 15 was the last week to work on the group project. Final steps of data analysis were completed with a great deal of help from Dr. Dahlquist. Adjustments were made to the list of transcription factors that were returned from Yeastract. This included trimming of the network because it was too large, as well as ensuring that specific genes requested by Dr. Dahlquist were included in the network. Dr. Dahlquist ran Matlab with the data that I provided her and I retrieved that output file containing the weighted gene network the following day. Overview of this process with corresponding files can be accessed on Emmatyrnauer Week 15.
• During finals week, my group met to work on our group presentation (which I thought went really well). Each of us focused on presenting the work we had individually accomplished for the project and collaborated on future directions for research and conclusions. Following the completion of the presentation, we completed the paper and the rest of the deliverables (which all can be accessed on Lights, Camera, InterACTION! Deliverables page

Assessment of Project

1. Give an objective assessment of the success of your project workflow and teamwork.
   • What worked and what didn't work?
   • What would you do differently if you could do it all over again?
2. Evaluate your team’s portion of the GRNsight Gene Page Project and Group Report in the following areas===
   • Content: What is the quality of the work?
   • Organization: Comment on the organization of the project and of your group's wiki pages.
   • Completeness: Did your team achieve all of the project objectives? Why or why not?

Reflection on the Process

1. What did you learn?
2. With your head (biological or computer science principles)
3. With your heart (personal qualities and teamwork qualities that make things work or not work)?
4. With your hands (technical skills)?
5. What lesson will you take away from this project that you will still use a year from now?