Difference between revisions of "Aporras1 Week 3"

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(References: added 4th reference)
(added study the curl'ed code from notebook)
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  curl -d "pre_text=cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta&Submit=TRANSLATE SEQUENCE" http://web.expasy.org/cgi-bin/translate/dna_aa
 
  curl -d "pre_text=cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta&Submit=TRANSLATE SEQUENCE" http://web.expasy.org/cgi-bin/translate/dna_aa
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==Study the curl'ed Code==
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'''Question 1:'''
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#http://www.w3.org/TR/html4/loose.dtd : Described as "the HTML 4.01 Transitional DTD, which includes presentation attributes and elements that W3C expects to phase out as support for style sheets matures."
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#http://web.expasy.org/favicon.ico : The logo for Expasy.
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#http://www.sib.swiss : The main web page for Swiss Institute of Bioinformatics.
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#https://www.expasy.org : The Expasy Bioinformatics Resource Portal.
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#http://web.expasy.org/translate/ : Expasy translation tool.
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#https://en.wikipedia.org/wiki/Open_reading_frame : Wikipedia link to what an "open reading frame" is described as.
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#https://www.expasy.org/disclaimer.html : Expasy disclaimer.
  
 
==Acknowledgements==
 
==Acknowledgements==

Revision as of 06:28, 20 September 2017

User Page: Antonio Porras

Assignment Page: Week 3

Electronic Notebook Link

Electronic Notebook

"Hacked" Page with Developer Tools Visible

File:900pixels

"Hacked" Page without Developer Tools Visible

File:900pixels

DMing the Server with curl

Final curl code:

curl -d "pre_text=cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta&Submit=TRANSLATE SEQUENCE" http://web.expasy.org/cgi-bin/translate/dna_aa

Study the curl'ed Code

Question 1:

  1. http://www.w3.org/TR/html4/loose.dtd : Described as "the HTML 4.01 Transitional DTD, which includes presentation attributes and elements that W3C expects to phase out as support for style sheets matures."
  2. http://web.expasy.org/favicon.ico : The logo for Expasy.
  3. http://www.sib.swiss : The main web page for Swiss Institute of Bioinformatics.
  4. https://www.expasy.org : The Expasy Bioinformatics Resource Portal.
  5. http://web.expasy.org/translate/ : Expasy translation tool.
  6. https://en.wikipedia.org/wiki/Open_reading_frame : Wikipedia link to what an "open reading frame" is described as.
  7. https://www.expasy.org/disclaimer.html : Expasy disclaimer.

Acknowledgements

  1. Met outside of class with Simon Wroblewski to discuss any questions we had prior to meeting and throughout the process of completing the Week 3 assignment.

While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.

Aporras1 (talk) 16:18, 17 September 2017 (PDT)

References

  1. Help:How to use images. (2016, December 06). Retrieved September 18, 2017, from https://simple.wikipedia.org/wiki/Help:How_to_use_images#Size
  2. Linux curl command help and examples. (2017, June 30). Retrieved September 19, 2017, from https://www.computerhope.com/unix/curl.htm
  3. Curl.haxx.se. (2017). curl - Tutorial. [online] Available at: https://curl.haxx.se/docs/httpscripting.html [Accessed 20 Sep. 2017].
  4. xpasy.org. (2017). ExPASy: SIB Bioinformatics Resource Portal - Home. [online] Available at: https://www.expasy.org [Accessed 20 Sep. 2017].
  5. LMU BioDB 2017. (2017). Week 3. Retrieved September 16, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_3