Difference between revisions of "CGDB: Circadian Gene DataBase"

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(added the links to the other databases that are linked to this database)
(corrected our answer regarding links to other databases)
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===General Utility===
 
===General Utility===
 
#Are there links to other databases?
 
#Are there links to other databases?
#*There is a need in the scientific community for this database at this time due to the fact that disruptions in circadian rhythms have been possibly entwined with diseases and disorders such as but not limited to psychiatric disorders and cancer. (Info found here: [https://academic.oup.com/nar/article/45/D1/D397/2333922/CGDB-a-database-of-circadian-genes-in-eukaryotes#51198539 https://academic.oup.com/nar/article/45/D1/D397/2333922/CGDB-a-database-of-circadian-genes-in-eukaryotes#51198539])
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#*This database contains links to other databases:  
#*This content is covered by other databases already, but not a comprehensive database for the circadian genes across phyla. (Info found here: [https://academic.oup.com/nar/article/45/D1/D397/2333922/CGDB-a-database-of-circadian-genes-in-eukaryotes#51198539 https://academic.oup.com/nar/article/45/D1/D397/2333922/CGDB-a-database-of-circadian-genes-in-eukaryotes#51198539])
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#*[http://circadb.hogeneschlab.org/ http://circadb.hogeneschlab.org/]
#*The database first went online in 2004. (Info found here: [https://academic.oup.com/nar/article/45/D1/D397/2333922/CGDB-a-database-of-circadian-genes-in-eukaryotes#51198539 https://academic.oup.com/nar/article/45/D1/D397/2333922/CGDB-a-database-of-circadian-genes-in-eukaryotes#51198539])
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#*[http://www.wgpembroke.com/shiny/SCNseq/ http://www.wgpembroke.com/shiny/SCNseq/]
#*The database is updated when new cycling genes are experimentally characterized. It appears that the database is updated monthly. (Info found here: [https://academic.oup.com/nar/article/45/D1/D397/2333922/CGDB-a-database-of-circadian-genes-in-eukaryotes#51198539 https://academic.oup.com/nar/article/45/D1/D397/2333922/CGDB-a-database-of-circadian-genes-in-eukaryotes#51198539]
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#*[https://www3.nd.edu/~bioclock/ https://www3.nd.edu/~bioclock/]
#*The database was last updated September 1, 2017? (Info found here: [http://cgdb.biocuckoo.org/index.php http://cgdb.biocuckoo.org/index.php])
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#*[http://circadiomics.igb.uci.edu/ http://circadiomics.igb.uci.edu/]
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#*[http://diurnal.mocklerlab.org/ http://diurnal.mocklerlab.org/]
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#*[http://www.bioinfo.mpg.de/euclis/ http://www.bioinfo.mpg.de/euclis/]
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#*[http://www.dbcryptochrome.org/ http://www.dbcryptochrome.org/]
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#*[http://www.ensembl.org/index.html http://www.ensembl.org/index.html]
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#*<b> Important note: not all of these links are successful</b>(Info found here: [http://cgdb.biocuckoo.org/links.php http://cgdb.biocuckoo.org/links.php]
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#Download Convenience:
 
#Download Convenience:
 
#*All downloads come in the .txt format ([http://cgdb.biocuckoo.org/download.php http://cgdb.biocuckoo.org/download.php]).
 
#*All downloads come in the .txt format ([http://cgdb.biocuckoo.org/download.php http://cgdb.biocuckoo.org/download.php]).
 
#*A TXT file is a standard text document and does not have any formatted text ([https://fileinfo.com/extension/txt https://fileinfo.com/extension/txt]).
 
#*A TXT file is a standard text document and does not have any formatted text ([https://fileinfo.com/extension/txt https://fileinfo.com/extension/txt]).

Revision as of 22:56, 1 October 2017

CGDB: Circadian Gene DataBase

General Information

  1. CGDB: Circadian Gene DataBase
  2. This is a circadian gene database.
    1. The database includes circadian gene DNA and protein sequences, model organisms specific to each circadian gene, clear descriptions of the circadian gene functions, and circadian gene tags specific to this database and other databases (http://cgdb.biocuckoo.org/view.php?id=021036).
    2. Circadian Gene DataBase is a secondary source of data.
  3. The Cuckoo Workgroup Maintains the database.
  4. This organization is funded by:

Quality of Science

  1. Content Domain:
  2. The species covered in the database include plants, animals, and fungi (http://cgdb.biocuckoo.org/browse.php).
  3. Is the database content timely?

General Utility

  1. Are there links to other databases?


  1. Download Convenience: