Difference between revisions of "Page Desiigner Deliverables Page"
From LMU BioDB 2017
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[[File:BiodbPageDesignFinalPresentation_.pptx]] | [[File:BiodbPageDesignFinalPresentation_.pptx]] | ||
| − | == Deliverables | + | == Page Designer Deliverables == |
# Organized Team deliverables wiki page (or other media (CD or flash drive) with table of contents) | # Organized Team deliverables wiki page (or other media (CD or flash drive) with table of contents) | ||
| + | #* | ||
# Group Report (''.doc'', ''.docx'' or ''.pdf'' file) | # Group Report (''.doc'', ''.docx'' or ''.pdf'' file) | ||
| + | #* | ||
# Individual statements of work, assessments, reflections (wiki page, ''.doc'', ''.docx'', ''.pdf'', or e-mailed to both Dr. Dahlquist and Dr. Dionisio) | # Individual statements of work, assessments, reflections (wiki page, ''.doc'', ''.docx'', ''.pdf'', or e-mailed to both Dr. Dahlquist and Dr. Dionisio) | ||
| + | #* | ||
# Group PowerPoint presentation (given on Tuesday, December 12, ''.ppt'', ''.pptx'' or ''.pdf'' file) | # Group PowerPoint presentation (given on Tuesday, December 12, ''.ppt'', ''.pptx'' or ''.pdf'' file) | ||
| + | #*[[File:BiodbPageDesignFinalPresentation_.pptx]] | ||
# Code (GitHub pull request) | # Code (GitHub pull request) | ||
#* Each team should coordinate in performing a final integration and integration testing iteration (see [[Coder]] milestone for details) which the Interaction and Integration team then submits to the ''original'' GRNsight GitHub repository as a single, unified pull request from the class project’s fork | #* Each team should coordinate in performing a final integration and integration testing iteration (see [[Coder]] milestone for details) which the Interaction and Integration team then submits to the ''original'' GRNsight GitHub repository as a single, unified pull request from the class project’s fork | ||
# Supply a README that summarizes the functionality of your team's new feature (''.txt'' or ''.md'', ''one README per team'') | # Supply a README that summarizes the functionality of your team's new feature (''.txt'' or ''.md'', ''one README per team'') | ||
| + | #* | ||
# Excel spreadsheet with ANOVA results/stem formatting (''.xlsx'') | # Excel spreadsheet with ANOVA results/stem formatting (''.xlsx'') | ||
| + | #*[[Media:Mbalducc_week8_dCIN5.zip|Excel file for the ANOVA of dCIN5]] | ||
# PowerPoint of screenshots of stem results (''.pptx'') | # PowerPoint of screenshots of stem results (''.pptx'') | ||
| + | #*[[media:Mbalducc_STEMprofiles.pdf| PowerPoint of STEM profiles and Gene Regulatory Network from GRNsight]] | ||
# Gene List and GO List files from each significant profile (''.txt'' compressed together in a ''.zip'' file) | # Gene List and GO List files from each significant profile (''.txt'' compressed together in a ''.zip'' file) | ||
| + | #*[[media:Mbalduccgene&GOlists.zip|Gene lists and GO lists]] | ||
# YEASTRACT "rank by TF" results (''.xlsx'') | # YEASTRACT "rank by TF" results (''.xlsx'') | ||
| + | #*[[media:Mbalducc_Profile_22_yeastract_data.xlsx| Excel Sheet of Profile #22 from YEASTRACT "Rank by TF" results]] | ||
# GRNmap input workbook (with network adjacency matrix, ''.xlsx'') | # GRNmap input workbook (with network adjacency matrix, ''.xlsx'') | ||
| + | #*[[media:17-genes_19-edges_team-hAPI_Sigmoid_estimation.xlsx|GRNmap input Workbook]] | ||
# GRNmap output workbook (''.xlsx'') | # GRNmap output workbook (''.xlsx'') | ||
| + | #*[[media:Mbalducc_GRNmapoutputfiles.zip|GRNmap output files]] | ||
# Electronic notebook corresponding to these the microarray results files ([[Week 8]], [[Week 10]], and Weeks 11-15) support ''reproducible research'' so that all manipulations of the data and files are documented so that someone else could begin with your starting file, follow the protocol, and obtain your results. | # Electronic notebook corresponding to these the microarray results files ([[Week 8]], [[Week 10]], and Weeks 11-15) support ''reproducible research'' so that all manipulations of the data and files are documented so that someone else could begin with your starting file, follow the protocol, and obtain your results. | ||
| + | #*[[mbalducc Week 8|Week 8]] | ||
| + | #*[[mbalducc Week 10|Week 10]] | ||
| + | #*[[mbalducc Week 11|Week 11]] | ||
| + | #*[[mbalducc Week 12|Week 12]] | ||
| + | #*[[mbalducc Week 14|Week 14]] | ||
===Project Manager/Quality Assurance Deliverables=== | ===Project Manager/Quality Assurance Deliverables=== | ||
Revision as of 11:42, 15 December 2017
Contents
Group PowerPoint Presentation
File:BiodbPageDesignFinalPresentation .pptx
Page Designer Deliverables
- Organized Team deliverables wiki page (or other media (CD or flash drive) with table of contents)
- Group Report (.doc, .docx or .pdf file)
- Individual statements of work, assessments, reflections (wiki page, .doc, .docx, .pdf, or e-mailed to both Dr. Dahlquist and Dr. Dionisio)
- Group PowerPoint presentation (given on Tuesday, December 12, .ppt, .pptx or .pdf file)
- Code (GitHub pull request)
- Each team should coordinate in performing a final integration and integration testing iteration (see Coder milestone for details) which the Interaction and Integration team then submits to the original GRNsight GitHub repository as a single, unified pull request from the class project’s fork
- Supply a README that summarizes the functionality of your team's new feature (.txt or .md, one README per team)
- Excel spreadsheet with ANOVA results/stem formatting (.xlsx)
- PowerPoint of screenshots of stem results (.pptx)
- Gene List and GO List files from each significant profile (.txt compressed together in a .zip file)
- YEASTRACT "rank by TF" results (.xlsx)
- GRNmap input workbook (with network adjacency matrix, .xlsx)
- GRNmap output workbook (.xlsx)
- Electronic notebook corresponding to these the microarray results files (Week 8, Week 10, and Weeks 11-15) support reproducible research so that all manipulations of the data and files are documented so that someone else could begin with your starting file, follow the protocol, and obtain your results.
Project Manager/Quality Assurance Deliverables
- Group report
- Individual statement of work, assessment and reflection was emailed to professors
- Github pull
- File:BiodbPageDesignFinalPresentation .pptx
Data Analyst Deliverables
- Excel file for the ANOVA of dCIN5
- PowerPoint of STEM profiles and Gene Regulatory Network from GRNsight
- Gene lists and GO lists
- Excel Sheet of Profile #22 from YEASTRACT "Rank by TF" results
- GRNmap input Workbook
- GRNmap output files
My electronic notebooks that outline the process I followed:
Mbalducc (talk) 12:39, 11 December 2017 (PST)
| GRNsight Gene Page Project Links | |||||||
|---|---|---|---|---|---|---|---|
| Overview | Deliverables | Reference Format | Guilds | Project Manager | Quality Assurance | Data Analysis | Coder |
| Teams | Page Desiigner | Lights, Camera, InterACTION! | Gene hAPI | JASPAR the Friendly Ghost | |||
Page Desiigner Deliverables Page
Page Desiigner Deliverables Page
Page Desiigner Schedule
Uploaded Files
File:Data Driven Design.zip
File:MaryHaydenWeek12JournalClubPresentation.pptx
File:BiodbPageDesignFinalPresentation .pptx
File:PageDesignREADME.txt
