Difference between revisions of "Emmatyrnauer Week 2"

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(3 reading frames read 5' to 3' on the mRNA)
(replacing three letter abbreviation with one letter)
Line 4: Line 4:
 
3'- gcauacgauuaugguacaaggcgcauauugggucggcggucaaggcgaccgccguaaaau -5'
 
3'- gcauacgauuaugguacaaggcgcauauugggucggcggucaaggcgaccgccguaaaau -5'
 
====3 reading frames read 5' to 3' on the mRNA (+1,+2, +3)====
 
====3 reading frames read 5' to 3' on the mRNA (+1,+2, +3)====
*stop-san-ala-ala-ser-gly-thr-gly-gly-trp-val-ile-arg-gly-thr-gly-tyr-stop-his-thr
+
*stop-N-A-A-S-G-T-G-G-W-V-I-R-G-T-G-Y-stop-H-T
*lys-met-pro-pro-ala-glu-leu-ala-ala-gly-leu-tyr-ala-glu-his-gly-ile-ser-ile
+
*K-M-P-P-A-glu-L-A-A-G-L-Y-A-E-H-G-I-S-I
*lys-cys-arg-gln-arg-asn-trp-arg-leu-gly-tyr-thr-arg-asn-met-val-leu-ala-tyr
+
*K-C-R-Q-R-N-W-R-L-G-Y-T-R-N-M-V-L-A-Y
  
 
==Complementary strand==
 
==Complementary strand==
Line 13: Line 13:
 
5'- cguaugcuaauaccauguuccgcguauaacccagccgccaguuccgcuggcggcauuuua -3’
 
5'- cguaugcuaauaccauguuccgcguauaacccagccgccaguuccgcuggcggcauuuua -3’
 
====3 reading frames read 5' to 3' on the mRNA (-1, -2, -3)====
 
====3 reading frames read 5' to 3' on the mRNA (-1, -2, -3)====
*arg-met-leu-ile-pro-cys-ser-ala-tyr-asn-pro-ala-ala-ser-ser-ala-gly-glt-ile-leu
+
*R-M-L-I-P-C-S-A-Y-N-P-A-A-S-S-A-G-G-I-L
*val-cys-stop-tyr-his-val-pro-arg-ile-thr-gln-pro-pro-val-pro-leu-ala-ala-phe
+
*V-C-stop-Y-H-V-P-R-I-T-Q-P-P-V-P-L-A-A-F
*tyr-ala-asn-thr-met-phe-arg-val-stop-pro-ser-arg-gln-phe-arg-trp-arg-his-phe
+
*Y-A-N-T-M-F-R-V-stop-P-S-R-Q-F-R-W-R-H-F

Revision as of 05:58, 11 September 2017

Strand Provided

5'- cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta -3’

mRNA synthesized from this strand

3'- gcauacgauuaugguacaaggcgcauauugggucggcggucaaggcgaccgccguaaaau -5'

3 reading frames read 5' to 3' on the mRNA (+1,+2, +3)

  • stop-N-A-A-S-G-T-G-G-W-V-I-R-G-T-G-Y-stop-H-T
  • K-M-P-P-A-glu-L-A-A-G-L-Y-A-E-H-G-I-S-I
  • K-C-R-Q-R-N-W-R-L-G-Y-T-R-N-M-V-L-A-Y

Complementary strand

3’- gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat -5’

mRNA synthesized from this strand

5'- cguaugcuaauaccauguuccgcguauaacccagccgccaguuccgcuggcggcauuuua -3’

3 reading frames read 5' to 3' on the mRNA (-1, -2, -3)

  • R-M-L-I-P-C-S-A-Y-N-P-A-A-S-S-A-G-G-I-L
  • V-C-stop-Y-H-V-P-R-I-T-Q-P-P-V-P-L-A-A-F
  • Y-A-N-T-M-F-R-V-stop-P-S-R-Q-F-R-W-R-H-F