Lights, Camera, InterACTION! Deliverables

From LMU BioDB 2017
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Group Report and Presentation

Presentation: Media:LCI Presentation.pdf

Individual Statements

Code and README

ANOVA and stem results, gene list and GO list files

  1. Excel workbook: Media:Wt_Microarraydata_ET.zip
  2. File used to run stem, gene list tables, GO list tables: Media:Week10_filesforstem_wildtype_emmat.zip‎
  3. Powerpoint presentation with stem images (also linked below under GRNmap workbooks): Media:Wt_profileimage_presentation_emmat.pptx

YEASTRACT results

  1. YEASTRACT rank by TF results: Media:Yeastract_profile45results_preserved_emmat.xlsx

GRNmap input and output workbooks

  1. Input: Media:RegulationMatrix_yeastract_week10etf.xlsx
  2. Output (within powerpoint presentation): Media:Wt_profileimage_presentation_emmat.pptx
  3. Final excel workbooks and GRNmap images after Matlab utilized: Media:GRNsight_inputoutput_excelandimages.zip‎
  4. Individual gene .jpg's from matlab output: Media:Emmat_gene_jpg_matlab.zip

Electronic notebook corresponding to microarray results

  1. Emmatyrnauer Week 8
  2. Emmatyrnauer Week 10
  3. Emmatyrnauer Week 11
  4. Emmatyrnauer Week 12
  5. Emmatyrnauer Week 14
  6. Emmatyrnauer Week 15

Navigational Links

Category Links
Interwiki Main Page   Course schedule   Lights, Camera, InterACTION!   LCI! Deliverables
Team Members Blair Hamilton   Emma Tyrnauer   Katie Wright   Zach Van Ysseldyk
GRNsight Gene Page
Project Instructions
Main Instructions   Project Deliverables   Week 11   Week 12   Week 14   Week 15
Guilds Project Manager   Quality Assurance   Data Analysis   Coder
GitHub GRNsight Link https://github.com/bhamilton18/GRNsight