RAD53 / YPL153C Week 3 - Revision history

Cdomin12: /* References addition */

2019-09-18T05:18:02Z

‎References addition

2019-09-18T05:13:41Z

‎References edit

2019-09-18T04:47:53Z

‎caption

2019-09-18T04:47:31Z

‎image upload

2019-09-18T04:46:26Z

‎answering difference in content

2019-09-18T04:45:38Z

‎References: Added reference for SGD and NCBI

2019-09-18T04:43:03Z

‎References: Added visible labels

2019-09-18T04:40:46Z

‎presentation update

2019-09-18T04:37:35Z

‎References: Added reference to week 3

2019-09-18T04:33:15Z

‎4. Protein sequence corresponding to your gene?: deleted extra space

@@ Line 118: / Line 118: @@
 #SGD Database. Retrieved September 17,2019 from [[https://www.yeastgenome.org/locus/S000006074|visible SGD Rad53]]
 #NCBI Database. Retrieved September 17,2019 from [[https://www.ncbi.nlm.nih.gov/gene/855950|visible NCBI Rad53]]
 #[[Week 3]] Assignment page is: LMU BioDB 2019. (2019). Week 3. Retrieved September 17, 2019 from [[https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_3|visible Week 3]]

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 ===References===
-ExPASy Translator. Retrieved September 17,2019 from [[https://web.expasy.org/translate/|visible EXPASy]]
+#ExPASy Translator. Retrieved September 17,2019 from [[https://web.expasy.org/translate/|visible EXPASy]]
+#SGD Database. Retrieved September 17,2019 from [[https://www.yeastgenome.org/locus/S000006074|visible SGD Rad53]]
-SGD Database. Retrieved September 17,2019 from [[https://www.yeastgenome.org/locus/S000006074|visible SGD Rad53]]
+#NCBI Database. Retrieved September 17,2019 from [[https://www.ncbi.nlm.nih.gov/gene/855950|visible NCBI Rad53]]
+#[[Week 3]] Assignment page is: LMU BioDB 2019. (2019). Week 3. Retrieved September 17, 2019 from [[https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_3|visible Week 3]]
 [[Category: Journal Entry]]

← Older revision		Revision as of 04:47, 18 September 2019
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	[[Image:genepic.png\|300px\|RAD53 Image]]		[[Image:genepic.png\|300px\|RAD53 Image]]
		+
		+	Image of the RAD53 gene

	===Acknowledgments===		===Acknowledgments===

@@ Line 99: / Line 99: @@
 ===8. Include an image related to your gene===
-[[Image:1dmz.png|300px|RAD53 Image]]
+[[Image:genepic.png|300px|RAD53 Image]]
 ===Acknowledgments===

← Older revision		Revision as of 04:46, 18 September 2019
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	===Were there differences in content, the information or data itself?===		===Were there differences in content, the information or data itself?===
		+	The difference in content was mainly in the more generalized or more specific functions given on the databases. For example, Uniprot gave detailed information specific to the gene's involvement with DNA damage checkpoints. Although the other databases did mention its involvement with DNA damage, it did not go into specifics but gave more functions that it is involved with. All databases were consistent with the gene's use in the study of breast cancer.

	===Were there differences in presentation of the information?===		===Were there differences in presentation of the information?===

← Older revision		Revision as of 04:45, 18 September 2019
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	ExPASy Translator. Retrieved September 17,2019 from [[https://web.expasy.org/translate/\|visible EXPASy]]		ExPASy Translator. Retrieved September 17,2019 from [[https://web.expasy.org/translate/\|visible EXPASy]]
		+
		+	SGD Database. Retrieved September 17,2019 from [[https://www.yeastgenome.org/locus/S000006074\|visible SGD Rad53]]
		+
		+	NCBI Database. Retrieved September 17,2019 from [[https://www.ncbi.nlm.nih.gov/gene/855950\|visible NCBI Rad53]]

	[[Week 3]] Assignment page is: LMU BioDB 2019. (2019). Week 3. Retrieved September 17, 2019 from [[https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_3\|visible Week 3]]		[[Week 3]] Assignment page is: LMU BioDB 2019. (2019). Week 3. Retrieved September 17, 2019 from [[https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_3\|visible Week 3]]

← Older revision		Revision as of 04:40, 18 September 2019
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	===Were there differences in presentation of the information?===		===Were there differences in presentation of the information?===
		+	NCBI did the best job at presenting the information so that you could scroll through one page and see all the data there was to offer. It was the most difficult to understand what the gene's role was. SGD and UnitProt had the best visual view of the gene and information. Ensembl was the most confusing to navigate in terms of different links to click on to find more information.

	===7. Why did you choose your particular gene? i.e., why is it interesting to you and your partner?===		===7. Why did you choose your particular gene? i.e., why is it interesting to you and your partner?===

← Older revision		Revision as of 04:37, 18 September 2019
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	===References===		===References===
		+
		+	[[Week 3]] Assignment page is: LMU BioDB 2019. (2019). Week 3. Retrieved September 17, 2019 from [[https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_3]]

	[[Category: Journal Entry]]		[[Category: Journal Entry]]

← Older revision		Revision as of 04:33, 18 September 2019
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	[[File:Tesfaiohannes.SEQUENCE..jpg\|900px\| Translation of the DNA sequence RAD53 from expasy.org]]		[[File:Tesfaiohannes.SEQUENCE..jpg\|900px\| Translation of the DNA sequence RAD53 from expasy.org]]
−

	Frame 1 5'3' encodes the entire protein sequence		Frame 1 5'3' encodes the entire protein sequence