Difference between revisions of "Ntesfaio Week 8"
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| + | How many genes are p < 0.05 for the Bonferroni-corrected p value? and what is the percentage (out of 6189)? | ||
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| + | 75/ 6189 or 1.2% | ||
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| + | How many genes are p < 0.05 for the Benjamini and Hochberg-corrected p value? and what is the percentage (out of 6189)? | ||
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| + | 1735/ 6189 or 28% | ||
===Data & Files=== | ===Data & Files=== | ||
Revision as of 19:38, 22 October 2019
Contents
Electronic Workbook
Purpose
The purpose of this week's lab is to continue off of week 7 by going through the steps of the data life cycle for a DNA microarray dataset
Methods/ Results
Week 8 Interim deadline for excel spreadsheet
File:Copy of BIOL367 F19 microarray-data dHAP4NtesfaioNT.zip
How many genes have p < 0.05? and what is the percentage (out of 6189)?
2479/ 6189 or 40%
How many genes have p < 0.01? and what is the percentage (out of 6189)?
1583/ 6189 or 26%
How many genes have p < 0.001? and what is the percentage (out of 6189)?
739/ 6189 or 12%
How many genes have p < 0.0001? and what is the percentage (out of 6189)?
280/6189 or 5%
How many genes are p < 0.05 for the Bonferroni-corrected p value? and what is the percentage (out of 6189)?
75/ 6189 or 1.2%
How many genes are p < 0.05 for the Benjamini and Hochberg-corrected p value? and what is the percentage (out of 6189)?
1735/ 6189 or 28%
Data & Files
File:Copy of BIOL367 F19 microarray-data dHAP4NtesfaioNT.zip
Conclusion
Acknowledgments
My homework partners this week are Aby User:Ymesfin and David User:Dramir36. We sat together in class to go over the assignment.
