Difference between revisions of "Ntesfaio Week 9"

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(Analyzing and Interpreting STEM results: added to analyzing section)
(Analyzing and Interpreting STEM results: changed values)
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==Analyzing and Interpreting STEM results==
 
==Analyzing and Interpreting STEM results==
  
I chose to analyze STEM result '''29'''
+
I chose to analyze STEM result '''45'''
  
 
Why did you select this profile? In other words, why was it interesting to you?
 
Why did you select this profile? In other words, why was it interesting to you?
  
I selected this profile because it is the only one to only move downward and not shoot back up. Any other profile that moved down eventually moved up again, but not profile 29.  
+
I selected this profile because it had a incline but then stayed steady for a while before declining.  
  
 
How many genes belong to this profile?
 
How many genes belong to this profile?
  
408.0 genes
+
354.0
  
 
How many genes were expected to belong to this profile?
 
How many genes were expected to belong to this profile?
  
31.2 genes were expected  
+
44.3 genes were expected  
  
 
What is the p value for the enrichment of genes in this profile?
 
What is the p value for the enrichment of genes in this profile?
  
p value of 1.9E-315 (significant)
+
p value of 2.9E-201 (significant)
  
 
How many GO terms are associated with this profile at p < 0.05?
 
How many GO terms are associated with this profile at p < 0.05?
  
 
How many GO terms are associated with this profile with a corrected p value < 0.05?
 
How many GO terms are associated with this profile with a corrected p value < 0.05?

Revision as of 14:53, 24 October 2019

Viewing and Saving Stem Results

dHAP4 Gene profile list

Analyzing and Interpreting STEM results

I chose to analyze STEM result 45

Why did you select this profile? In other words, why was it interesting to you?

I selected this profile because it had a incline but then stayed steady for a while before declining.

How many genes belong to this profile?

354.0

How many genes were expected to belong to this profile?

44.3 genes were expected

What is the p value for the enrichment of genes in this profile?

p value of 2.9E-201 (significant)

How many GO terms are associated with this profile at p < 0.05?

How many GO terms are associated with this profile with a corrected p value < 0.05?