Difference between revisions of "Dmadere Week 9"
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(→Analyzing and Interpreting STEM Results: answered questions) |
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===Analyzing and Interpreting STEM Results=== | ===Analyzing and Interpreting STEM Results=== | ||
| + | #Selected one of the profiles saved in the previous step for further interpretation of the data. Each member of the group selected their own significant profile to analyze. | ||
| + | #*'''Why did you select Profile #22? In other words, why was it interesting to you? | ||
| + | #::- I selected Profile #22 because the cluster appeared very different from the rest of the clusters. Unlike the other clusters, this profile started out as a straight line, increased, and then slowly decreased. I wanted to analyze why this was occurring and get a better understanding of why this profile exhibits these qualities. When I clicked on the profile, I noticed that each colored line representing the genes started from 0 and stayed close until around the 60min time frame where it started to increase, and then decreased at the 90min time frame, which I also wanted to analyze further | ||
| + | #*'''How many genes belong to this profile?''' | ||
| + | #::- There are 179 genes assigned to Profile 22. | ||
| + | #*'''How many genes were expected to belong to this profile?''' | ||
| + | #::- There were 22.9 genes expected in this profile. | ||
| + | #*'''What is the p value for the enrichment of genes in this profile?''' | ||
| + | #::- The p-value for the enrichment of genes in Profile 22 is 3.4E-98 and it is significant. | ||
==Data & Files== | ==Data & Files== | ||
Revision as of 18:43, 28 October 2019
Contents
Purpose
Methods/Results
Viewing and Saving STEM Results
Analyzing and Interpreting STEM Results
- Selected one of the profiles saved in the previous step for further interpretation of the data. Each member of the group selected their own significant profile to analyze.
- Why did you select Profile #22? In other words, why was it interesting to you?
- - I selected Profile #22 because the cluster appeared very different from the rest of the clusters. Unlike the other clusters, this profile started out as a straight line, increased, and then slowly decreased. I wanted to analyze why this was occurring and get a better understanding of why this profile exhibits these qualities. When I clicked on the profile, I noticed that each colored line representing the genes started from 0 and stayed close until around the 60min time frame where it started to increase, and then decreased at the 90min time frame, which I also wanted to analyze further
- How many genes belong to this profile?
- - There are 179 genes assigned to Profile 22.
- How many genes were expected to belong to this profile?
- - There were 22.9 genes expected in this profile.
- What is the p value for the enrichment of genes in this profile?
- - The p-value for the enrichment of genes in Profile 22 is 3.4E-98 and it is significant.
