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- 15:38, 13 October 2019 (diff | hist) (+527) Class Journal Week 7 (added questions)
- 19:45, 9 October 2019 (diff | hist) (+1) Week 6 Individual Journal (→Acknowledgements: changed format)
- 19:45, 9 October 2019 (diff | hist) (+202) Week 6 Individual Journal (→Acknowledgements: added acknowledgements)
- 17:10, 9 October 2019 (diff | hist) (+1) Week 6 Individual Journal (/* 2. (Question 6b, p. 110) Look at Figure 4.7, which depicts the loss of oxygen over time and the transcriptional response of three genes. These data are the ratios of transcription for genes X, Y, and Z during the depletion of oxygen; changed answer)
- 16:57, 9 October 2019 (diff | hist) (-1) Week 6 Individual Journal (→10. (Question 16, p. 121) Using the microarray data, how could you verify that you had truly deleted TUP1 or overexpressed YAP1 in the experiments described in questions 8 and 9?)
- 14:52, 8 October 2019 (diff | hist) (+3) Week 6 Individual Journal (/* 2. (Question 6b, p. 110) Look at Figure 4.7, which depicts the loss of oxygen over time and the transcriptional response of three genes. These data are the ratios of transcription for genes X, Y, and Z during; changed answer)
- 14:48, 8 October 2019 (diff | hist) (+74) Week 6 Individual Journal (/* 4. (Question 9, p. 118) Why would most spots be yellow at the first time point? I.e., what is the technical reason that spots show up as yellow - where does the yellow color come from? And, what would be the biological reason; added more to answer)
- 18:24, 7 October 2019 (diff | hist) (+29) Week 6 Individual Journal (→References: added category)
- 18:22, 7 October 2019 (diff | hist) (+1) Week 6 Individual Journal (→Purpose: changed format)
- 18:22, 7 October 2019 (diff | hist) (+30) Week 6 Individual Journal (→Purpose: added link to week 6)
- 18:21, 7 October 2019 (diff | hist) (+680) Week 6 Individual Journal (→10. (Question 16, p. 121) Using the microarray data, how could you verify that you had truly deleted TUP1 or overexpressed YAP1 in the experiments described in questions 8 and 9?: added answer)
- 18:16, 7 October 2019 (diff | hist) (+242) Week 6 Individual Journal (/* 9. (Question 14, p. 121) Consider a microarray experiment where cells that overexpress the transcription factor Yap1p were subjected to the same experiment of a timecourse of glucose depletion; added answer)
- 18:07, 7 October 2019 (diff | hist) (-35) Week 6 Individual Journal (→Acknowledgements: deleted)
- 18:06, 7 October 2019 (diff | hist) (+227) Week 6 Individual Journal (/* 8. (Question 13, p. 121) Consider a microarray experiment where cells deleted for the repressor TUP1 were subjected to the same experiment of a timecourse added answer)
- 18:36, 6 October 2019 (diff | hist) (+174) Class Journal Week 6 (→What role did data sharing play in uncovering this fraud?: added answer)
- 18:32, 6 October 2019 (diff | hist) (+148) Class Journal Week 6 (→What additional information would you like to know about this case?: added fraud)
- 18:30, 6 October 2019 (diff | hist) (+340) Class Journal Week 6 (→What are your initial reactions to hearing about this case?: added answer)
- 18:27, 6 October 2019 (diff | hist) (+138) Class Journal Week 6 (→Were you aware of this case of research fraud before viewing this video?: added answer)
- 18:26, 6 October 2019 (diff | hist) (+8) Class Journal Week 6 (changed fomat)
- 18:26, 6 October 2019 (diff | hist) (+302) Class Journal Week 6 (added questions)
- 18:11, 6 October 2019 (diff | hist) (+495) Week 6 Individual Journal (/* 4. (Question 9, p. 118) Why would most spots be yellow at the first time point? I.e., what is the technical reason that spots show up as yellow - where does the yellow color come from? added answer)
- 17:32, 6 October 2019 (diff | hist) (+2) Week 6 Individual Journal (→Acknowledgements: changed format)
- 17:32, 6 October 2019 (diff | hist) (+1) Week 6 Individual Journal (→References: changed format)
- 17:32, 6 October 2019 (diff | hist) (+201) Week 6 Individual Journal (→References: added signature)
- 17:32, 6 October 2019 (diff | hist) (+100) Week 6 Individual Journal (→Acknowledgements: added acknowledgements)
- 17:30, 6 October 2019 (diff | hist) (+693) Week 6 Individual Journal (→Acknowledgements: added references)
- 17:28, 6 October 2019 (diff | hist) (+135) Week 6 Individual Journal (→Purpose: added purpose)
- 17:24, 6 October 2019 (diff | hist) (+228) Week 6 Individual Journal (/* 2. (Question 6b, p. 110) Look at Figure 4.7, which depicts the loss of oxygen over time and the transcriptional response of three genes. These data are the ratios of transcription for genes X, Y, and Z during the depletion of oxygen. added answer)
- 15:15, 6 October 2019 (diff | hist) (-22) Week 6 Individual Journal (→Acknowledgements: deleted title)
- 15:15, 6 October 2019 (diff | hist) (+322) Week 6 Individual Journal (→7. (Question 12, p. 120) What mechanism could the genome use to ensure genes for enzymes in a common pathway are induced or repressed simultaneously?: added answer)
- 15:15, 6 October 2019 (diff | hist) (+407) Week 6 Individual Journal (→6. (Question, 11, p. 120) Why would TCA cycle genes be induced if the glucose supply is running out?: added answer)
- 15:14, 6 October 2019 (diff | hist) (+323) Week 6 Individual Journal (/* 5. (Question 10, p. 118) Go to the Saccharomyces Genome Database and search for the gene TEF4; you will see it is involved in translation. Look at the time point labeled OD 3.7 in Figure 4.12, and find the TEF4 spot. added answer)
- 15:14, 6 October 2019 (diff | hist) (+314) Week 6 Individual Journal (→Questions: changed format)
- 15:10, 6 October 2019 (diff | hist) (+31) Week 6 Individual Journal (→Questions: added graph)
- 15:05, 6 October 2019 (diff | hist) (0) N File:Ymesfin q1 graph.PNG (current)
- 15:04, 6 October 2019 (diff | hist) (0) N File:Capture.PNG (current)
- 15:03, 6 October 2019 (diff | hist) (+8) Week 6 Individual Journal (changed title)
- 15:03, 6 October 2019 (diff | hist) (+2,951) N Week 6 Individual Journal (added questoins and titles)
- 15:00, 6 October 2019 (diff | hist) (+132) User:Ymesfin (→Assignments: added week 6 info)
- 21:54, 1 October 2019 (diff | hist) (+83) Class Journal Week 5 (→Aby's Response: added signature)
- 21:53, 1 October 2019 (diff | hist) (+315) Class Journal Week 5 (→Name two of these core competencies that you want to know more about? Why?: added answer)
- 21:50, 1 October 2019 (diff | hist) (+692) Class Journal Week 5 (→Name two of these core competencies are you most skilled with (or which is most familiar to you)? Where and how did you gain the skills/become familiar?: added answer)
- 21:42, 1 October 2019 (diff | hist) (+260) Class Journal Week 5 (added questions)
- 20:35, 30 September 2019 (diff | hist) (-110) IMG/VR Week 5 (→Powerpoint Presentation: deleted ppt)
- 19:41, 30 September 2019 (diff | hist) (+186) IMG/VR Week 5 (/* 4. Evaluate the “user-friendliness” of the database: can a naive user quickly navigate the website and gather useful information?Is the website well-organized? Does it have a help section or tutorial? Are the search options sensible? added link)
- 19:40, 30 September 2019 (diff | hist) (+172) IMG/VR Week 5 (→2. Is it convenient to browse the data?: added link)
- 19:39, 30 September 2019 (diff | hist) (+94) IMG/VR Week 5 (/* 3. Is it convenient to download the data? In what file formats are the data provided? What type of files, indicated by the file extension (e.g., .txt, .xml., etc.)? Are they standard or non-standard formats? added link)
- 19:38, 30 September 2019 (diff | hist) (+25) IMG/VR Week 5 (→1. Are there links to other databases? Which ones?: added link)
- 19:38, 30 September 2019 (diff | hist) (+94) IMG/VR Week 5 (→5.How current is the database?: added link)
- 19:37, 30 September 2019 (diff | hist) (+94) IMG/VR Week 5 (→4. What is their funding source(s)?: added link)
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