Ymesfin Week 7

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Purpose

The purpose of this assignment was to create a detailed electronic lab notebook that analyzes a DNA microarray dataset and to demonstrate our understanding of p-value cut-offs.

Methods

  1. The data was first downloaded from the wiki
    • The strain we will be analyzing is Delta-Hap4
    • The data was obtained from the following file: Ymesfin_BIOL367_F19_microarray-data_dHAP4(7846).xlsx
    • The file had timepoints at 15, 30, 60, 90, and 120 minutes. All the timepoints had 4 replicates but the 90 and 120 minute timepoints had 3 replicates. There were a total of 6189 samples in this dataset.

Results