Week 5 - Revision history

Kdahlquist: /* Shared Journal Assignment */ fix reference to week 5

2024-02-09T00:38:18Z

‎Shared Journal Assignment: fix reference to week 5

2024-02-08T22:59:00Z

‎Individual Journal Assignment: fixed week 6 to week 5

2024-02-08T04:50:27Z

remove under construction falg

2024-02-08T04:02:26Z

‎Homework Partners: assign homework partners

2024-02-08T03:55:41Z

‎Read: add link to YubTub animation :)

2024-02-08T03:48:12Z

‎View & Read: fix link

2024-02-08T03:47:31Z

‎View & Read: fix link to data sharing

2024-02-08T03:46:00Z

‎Read: remove link

2024-02-08T03:45:39Z

‎Read: add doi

2024-02-08T03:45:05Z

‎Read: remove link

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 == Shared Journal Assignment ==
-* Store your journal entry in the shared [[Class Journal Week 6]] page.  If this page does not exist yet, go ahead and create it (congratulations on getting in first&nbsp;''':)'''&nbsp;)
+* Store your journal entry in the shared [[Class Journal Week 5]] page.  If this page does not exist yet, go ahead and create it (congratulations on getting in first&nbsp;''':)'''&nbsp;)
 * Link to your journal entry from your user page.
 * Link back from the journal entry to your user page.

@@ Line 11: / Line 11: @@
 == Individual Journal Assignment ==
-* Store this journal entry as "''username'' Week 6" (i.e., this is the text to place between the square brackets when you link to this page).
+* Store this journal entry as "''username'' Week 5" (i.e., this is the text to place between the square brackets when you link to this page).
 * Create the following set of links. '''''(HINT: These links should all be in your personal template that you created for the [[Week 1 | Week 1 Assignment]]; you should then simply invoke your template on each new journal entry.)'''''
 ** Link to your journal entry from your user page.

← Older revision		Revision as of 04:50, 8 February 2024
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−	~~{{Under Construction}}~~
−
	'''This journal entry is due on Thursday, February 15, at 12:01am Pacific time.'''		'''This journal entry is due on Thursday, February 15, at 12:01am Pacific time.'''

← Older revision		Revision as of 04:02, 8 February 2024
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	You will work in groups of two for this week's assignment. Please sit next to your partner in class. You will be expected to consult with your partner, in order to complete the assignment. However, unless otherwise stated, each partner must submit his or her own work as the individual journal entry (direct copies of each other's work is not allowed). Homework partners for this week are:		You will work in groups of two for this week's assignment. Please sit next to your partner in class. You will be expected to consult with your partner, in order to complete the assignment. However, unless otherwise stated, each partner must submit his or her own work as the individual journal entry (direct copies of each other's work is not allowed). Homework partners for this week are:
		+
		+	* Hailey & Katie
		+	* Charlotte & Dean
		+	* Drew & Natalija

	=== Electronic Lab Notebook ===		=== Electronic Lab Notebook ===

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 * [http://www.ncbi.nlm.nih.gov/books/NBK26818/#A1633 Alberts ''et al''. (2002) ''Molecular Biology of the Cell'', Ch. 8: Microarrays]
-<!--* [http://www.bio.davidson.edu/courses/genomics/chip/chip.html Microarray animation]-->
+* [https://www.youtube.com/watch?v=0ATUjAxNf6U Microarray animation]
 * Brown, P.O. & Botstein, D. (1999) Exploring the new world of the genome with DNA microarrays ''Nature Genetics''  21: 33-37. [https://doi.org/10.1038/4462 https://doi.org/10.1038/4462]
 * Campbell, A.M. and Heyer, L.J. (2003), “Chapter 4:  Basic Research with DNA Microarrays”, in ''Discovering Genomics, Proteomics, and Bioinformatics'', Cold Spring Harbor Laboratory Press, pp. 107-124. ([http://brightspace.lmu.edu Available on Brightspace])

@@ Line 84: / Line 84: @@
 * Watch the video [https://www.youtube.com/watch?v=eV9dcAGaVU8 "Deception at Duke" from CBS ''60 Minutes''].
-* [[Media:L02_DataSharing.pptx Data Sharing | DataONE Data Sharing slides]]
+* [[Media:L02_DataSharing.pptx | DataONE Data Sharing slides]]
 === Reflection ===

@@ Line 53: / Line 53: @@
 * [http://www.ncbi.nlm.nih.gov/books/NBK26818/#A1633 Alberts ''et al''. (2002) ''Molecular Biology of the Cell'', Ch. 8: Microarrays]
 <!--* [http://www.bio.davidson.edu/courses/genomics/chip/chip.html Microarray animation]-->
-* Brown, P.O. & Botstein, D. (1999) [http://www.nature.com/ng/journal/v21/n1s/full/ng0199supp_33.html Exploring the new world of the genome with DNA microarrays] ''Nature Genetics''  21: 33-37.
+* Brown, P.O. & Botstein, D. (1999) [http://www.nature.com/ng/journal/v21/n1s/full/ng0199supp_33.html Exploring the new world of the genome with DNA microarrays] ''Nature Genetics''  21: 33-37. [https://doi.org/10.1038/4462 https://doi.org/10.1038/4462]
 * Campbell, A.M. and Heyer, L.J. (2003), “Chapter 4:  Basic Research with DNA Microarrays”, in ''Discovering Genomics, Proteomics, and Bioinformatics'', Cold Spring Harbor Laboratory Press, pp. 107-124. ([http://brightspace.lmu.edu Available on Brightspace])
 * DeRisi, J.L., Iyer, V.R., and Brown, P.O.  (1997)  Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale.  ''Science'' 278: 680-686. DOI: [https://doi.org/10.1126/science.278.5338.680 https://doi.org/10.1126/science.278.5338.680]