Difference between revisions of "Yeast Beasts Deliverables"
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# YEASTRACT "rank by TF" results (''.xlsx'') | # YEASTRACT "rank by TF" results (''.xlsx'') | ||
# GRNmap input workbook (''.xlsx'') [[media:GRNmap_930PM.xlsx|GRNmap input workbook]] | # GRNmap input workbook (''.xlsx'') [[media:GRNmap_930PM.xlsx|GRNmap input workbook]] | ||
| − | # GRNmap output workbook (''.xlsx'') and output plots (''.jpg'') zipped together [https://lmu.box.com/s/rathfd4jhdqdjzuci4kdagmptq1jbxeb | + | # GRNmap output workbook (''.xlsx'') and output plots (''.jpg'') zipped together [https://lmu.box.com/s/rathfd4jhdqdjzuci4kdagmptq1jbxeb link to box with GRNmap output] |
# MS Access database, including all tables (''.accdb'') [https://lmu.box.com/s/2mcetil8n7vxzwe100avt5yhmc7psuh5|link Database] | # MS Access database, including all tables (''.accdb'') [https://lmu.box.com/s/2mcetil8n7vxzwe100avt5yhmc7psuh5|link Database] | ||
| − | # ReadMe for the database that describes the design of the database, references the sources of the data, and has a [https://www.quackit.com/microsoft_access/microsoft_access_2016/howto/how_to_create_a_database_diagram_in_access_2016.cfm database schema diagram] (''.docx'', ''.pdf'') | + | # ReadMe for the database that describes the design of the database, references the sources of the data, and has a [https://www.quackit.com/microsoft_access/microsoft_access_2016/howto/how_to_create_a_database_diagram_in_access_2016.cfm database schema diagram] (''.docx'', ''.pdf'') [https://lmu.box.com/s/0j6y9p1mrb3dji8wuvn8zhfwrb6lpo97 database diagram] |
# Query design for populating a GRNmap input workbook from the database (screenshot of MS Access; or SQL code, ''.txt'') | # Query design for populating a GRNmap input workbook from the database (screenshot of MS Access; or SQL code, ''.txt'') | ||
# Electronic notebook corresponding to these the microarray results files ([[Week 13]], [[Week 14]], and [[Week 15]]) to support ''reproducible research'' so that all manipulations of the data and files are documented so that someone else could begin with your starting file, follow the protocol, and obtain your results. | # Electronic notebook corresponding to these the microarray results files ([[Week 13]], [[Week 14]], and [[Week 15]]) to support ''reproducible research'' so that all manipulations of the data and files are documented so that someone else could begin with your starting file, follow the protocol, and obtain your results. | ||
Revision as of 17:13, 2 May 2024
- Organized Team deliverables wiki page with table of contents
- Group Report (.docx or .pdf file)
- Individual statements of work, assessments, reflections (wiki page, .docx, .pdf, or e-mailed to Dr. Dahlquist)
- Group PowerPoint presentation (given on Thursday, May 2, .pptx or .pdf file)
- Sample-data relationship table in Excel (.xlsx)
- Excel spreadsheet with ANOVA results/stem formatting (.xlsx) ANOVA table
- PowerPoint of ANOVA table, screenshots of stem results (.pptx), screenshot of black and white GRNsight input network and colored GRNmap/GRNsight output networks
- Gene List and GO List files from each significant profile (.txt compressed together in a .zip file)
- YEASTRACT "rank by TF" results (.xlsx)
- GRNmap input workbook (.xlsx) GRNmap input workbook
- GRNmap output workbook (.xlsx) and output plots (.jpg) zipped together link to box with GRNmap output
- MS Access database, including all tables (.accdb) Database
- ReadMe for the database that describes the design of the database, references the sources of the data, and has a database schema diagram (.docx, .pdf) database diagram
- Query design for populating a GRNmap input workbook from the database (screenshot of MS Access; or SQL code, .txt)
- Electronic notebook corresponding to these the microarray results files (Week 13, Week 14, and Week 15) to support reproducible research so that all manipulations of the data and files are documented so that someone else could begin with your starting file, follow the protocol, and obtain your results.
