MSymond1 Week 13

Progress Report

Milestone 1

• Milestone 1 had been completed with our presentation to the class

Milestone 2

• Milestone 2 was completed because we both already had the necessary softwares for the assignment

Milesone 3

• Milestone 3 was the most time consuming and most difficult of all the milestones
• The gene ID table from yeastmine could not yet be acquired because I do not know how to access a full length table from the website of the entire yeast genome or download it from the website
• The Gene expression table is being made by the data analysts, therefore we do not have access to it yet
• After importing the data for the network table, it needed some cleaning up
• YPD is rich medium, can be deleted
• The numbers at top row could be deleted, because nor me or Dr. Dahlquist had an idea what it is
• We attempted to convert the p values to either 0 or 1, 1 if p<.001 and 0 if p>.001
• It didn’t work on my computer trying to do the syntax to convert the p values, and it didn’t on Dahlquist’s computer either, but it did on Andrew’s so we just used his
• The rest of the data tables do not require much adjusting if at all. Therefore they should be more simple to import into the database
• I attempted to import the data from the degradation rates and the production rates tables into excel, however it did not separate any of the rows or columns, I will likely have to ask my professor how to troubleshoot this issue.

Team Journal Assignment

1. This week, me and my partner completed milestones 1 and 2, and we are currently working on milestone 3, there are some complications in milestone 3, for a large part of it requires Microsoft Access, and there are also some issues in importing tables to excel. MSymond1
2. Each team member should reflect on the team's progress:
   1. The things that worked well are cleaning up the data for the network table, which was done in class on Tuesday, the data table looks much more organized and the p values have all been successfully converted
   2. The other data tables are not pasting into excel as neatly as anticipated, I am also unaware of how to obtain the data from the yeastmine website.
   3. To fix these issues, I will ask Dr. Dahlquist for further advice in class on Thursday.

User Page

• User:Msymond1

Assignment Pages

• Week 1
• Week 2
• Week 3
• Week 4
• Week 5
• Week 6
• Week 8
• Week 9
• Week 10
• Week 12
• Week 13
• Week 15

Individual Journal Pages

• MSymond1 Week 1
• MSymond1 Week 2
• MSymond1 KMill104 Week 3
• NeMO_Week4
• MSymond1 Week 5
• MSymond1 Week 6
• MSymond1 Week 8
• MSymond1 Week 9
• MSymond1 Week 10
• MSymond1 Week 12
• MSymond1 Week 13
• MSymond1 Week 15

Class Journal Pages

• Class Journal Week 1
• Class Journal Week 2
• Class Journal Week 3
• Class Journal Week 4
• Class Journal Week 5
• Class Journal Week 6
• Class Journal Week 8
• Class Journal Week 9
• Class Journal Week 10