Difference between revisions of "Hivanson and Nstojan1 Week 3"
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(→Summary of Function: colon after summ of function) |
(→Other Information:: question 1 filled in from SGD) |
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===Other Information:=== | ===Other Information:=== | ||
#What is the standard name, systematic name, and name description for your gene (from SGD)? | #What is the standard name, systematic name, and name description for your gene (from SGD)? | ||
| + | #*Standard name: IMD3 | ||
| + | #*Systematic name: YLR432W | ||
| + | #*Name description: IMP Dehydrogenase | ||
#What is the gene ID (identifier) for your gene in all four databases (SGD, NCBI Gene, Ensembl, UniProt)? | #What is the gene ID (identifier) for your gene in all four databases (SGD, NCBI Gene, Ensembl, UniProt)? | ||
#*Provide hyperlinks to the specific pages for your gene in each of the above databases. | #*Provide hyperlinks to the specific pages for your gene in each of the above databases. | ||
Revision as of 17:51, 31 January 2024
IMD3
Summary of Function:
Other Information:
- What is the standard name, systematic name, and name description for your gene (from SGD)?
- Standard name: IMD3
- Systematic name: YLR432W
- Name description: IMP Dehydrogenase
- What is the gene ID (identifier) for your gene in all four databases (SGD, NCBI Gene, Ensembl, UniProt)?
- Provide hyperlinks to the specific pages for your gene in each of the above databases.
- What is the DNA sequence of your gene?
- What is the protein sequence corresponding to your gene?
- Go to the ExPASy tool and translate the DNA sequence of your gene. Which reading frame encodes the protein sequence? Take a screenshot of your results, display it on your wiki page, and state which frame it is.
- What is the function of your gene?
- What was different about the information provided about your gene in each of the parent databases?
- Were there differences in content, the information or data itself?
- Were there differences in presentation of the information?
- Why did you choose your particular gene? i.e., why is it interesting to you and your partner?
- Include an image related to your gene (be careful that you do not violate any copyright restrictions!)
- Please make the image something scientific (not like the random images seen on the SGD blog posts).
- If a 3D structure of the protein your gene encodes is available, you can choose to embed a rotating image of the structure on your page using the FirstGlance in Jmol software. This is optional, a different static image would be OK, too.
- The NCBI Structure database and RSCB Protein Databank also display structures.
