Data Analysts Week 15

Milestone 5

1. We created a gene regulatory network for GRNmap using using the Access database that the Coders/Designers made.
2. Dean Symonds assisted us in creating an input workbook for GRNmap using queries to the Microsoft Access database created by the Coders/Designers.

The queries were created as follows:

• production_rates
• degradation_rates
• wt_log2_expression (based on the CHP-treated data)
• network

• We sent our data to Dr. Dahlquist and she helped us interpret the data.

Acknowledgements

This procedure was adapted from the Data Analysis page Milestone 3 and 4 protocol, linked here: Data Analysis The procedure for Milestone 3 was also adapted from the steps outlined in the Week 9 assignment page. The procedure for Milestone 4 was also adapted from the steps outlined in the Week 10 assignment page. Our quality assurance, Hailey Ivanson was a key part in completing this milestone, and her help was very valuable. Except for what is noted above, this individual journal entry was completed by Katie and Charlotte and not copied from another source.

Ckapla12 (talk) 18:54, 2 May 2024 (PDT)

References

LMU BioDB 2024. (2024). Week 14. Retrieved April 23, 2024 from https://xmlpipedb.cs.lmu.edu/biodb/spring2024/index.php/Week_14

LMU BioDB 2024. (2024). Week 15. Retrieved May 2, 2024 from https://xmlpipedb.cs.lmu.edu/biodb/spring2024/index.php/Week_15

LMU BioDB 2024. (2024). Data Analysis. Retrieved April 23, 2024 from https://xmlpipedb.cs.lmu.edu/biodb/spring2024/index.php/Data_Analysis

Team Pages

• Yeast Beasts Main Page
• Deliverables
• Overview

Role Pages

• Project Manager
• Quality Assurance
• Data Analysis
• Coder/Designer