File list
This special page shows all uploaded files. When filtered by user, only files where that user uploaded the most recent version of the file are shown.
 Date |
Name | Thumbnail | Size | User | Description | Versions |
|---|---|---|---|---|---|---|
| 00:37, 14 December 2013 | Report for Final Project HDDWKS 20131213.pdf (file) |  | 657 KB | Ksherbina | 2 | |
| 00:16, 14 December 2013 | ReadMe Ct-Std External 20131122.pdf (file) | | 91 KB | Ksherbina | 1 | |
| 00:01, 14 December 2013 | Transcriptional Analysis of the Developmental Stages of Chlamydia trachomatis A HAR-13 HDKSDW 20131212.pdf (file) | | 792 KB | Ksherbina | 1 | |
| 23:59, 13 December 2013 | For GenMAPP Chlamydia V4 20131212 KS Presence of Rifampicin.gex (file) |  | 476 KB | Ksherbina | 1 | |
| 23:55, 13 December 2013 | Ct External 20131121 Gene Database Testing Report.pdf (file) | | 28 KB | Ksherbina | 1 | |
| 12:02, 13 December 2013 | C.trachomatis Gene Database Final Testing Report 20131212.pdf (file) | | 28 KB | Ksherbina | (Gene database testing report for C. trachomatis) | 1 |
| 06:43, 13 December 2013 | Ct-Std External 20131121.gdb (file) | | 9.82 MB | Ksherbina | (Same database as Ct-Std v2 KS 20131121.gdb. The name was changed during the preparation of the final deliverables for the project.) | 1 |
| 23:25, 12 December 2013 | Ct-Std v2 KS 20131121.gdb (file) | | 9.82 MB | Ksherbina | (Same database but renamed) | 2 |
| 20:57, 24 November 2013 | C.trachomatis Sample Microarray Data for GenMAPP KS 20131124.txt (file) |  | 633 KB | Ksherbina | (Tab-delimited version of the sample microarray data (needs to be in this format for GenMAPP)) | 1 |
| 20:49, 24 November 2013 | C.trachomatis Sample Microarray Data for GenMAPP KS 20131124.xls (file) | | 1.95 MB | Ksherbina | (Sample microarray data for C. trachomatis made to test the new gene database with GenMAPP.) | 1 |
| 06:29, 22 November 2013 | Tally Engine Results for Ct-Std v2 KS 20131121.jpg (file) |  | 39 KB | Ksherbina | (Tally Engine count for Ct-Std_v2_KS_20131121 database) | 1 |
| 18:15, 21 November 2013 | Ct-Std KS 20131121.gdb (file) | | 10.01 MB | Ksherbina | (Gene database for C. trachomatis) | 1 |
| 17:37, 19 November 2013 | Ct-Std v1 KS 20131119.gdb (file) | | 13.38 MB | Ksherbina | (First iteration of the gene database export for Chlamydia trachomatis serovar A) | 1 |
| 01:34, 15 November 2013 | Go daily-termdb v2 HD 20131107.obo-xml.gz (file) | | 3.76 MB | Ksherbina | (New version of Go_daily-termdb.obo-xml.gz_v1_HD_20131107. This version has the correct file extension) | 1 |
| 01:31, 15 November 2013 | Go daily-termdb.obo-xml v1 HD 20131107.gz (file) | | 3.76 MB | Ksherbina | (Corrected file extension) | 2 |
| 17:28, 14 November 2013 | 22183.C trachomatis A KS 20131114.goa (file) | | 964 KB | Ksherbina | 1 | |
| 17:27, 14 November 2013 | Uniprot XML C.trachomatis serovar A KS 20131114.xml (file) | | 4.48 MB | Ksherbina | 1 | |
| 09:26, 12 November 2013 | Presentation on C.trachomatis Genome Paper KS HD DW 20131112.pdf (file) | | 1.93 MB | Ksherbina | 1 | |
| 07:14, 25 October 2013 | GOA and GO Files KS 20131013.zip (file) | | 4.1 MB | Ksherbina | 1 | |
| 07:10, 25 October 2013 | UniProt V cholerae KSTV 20131022.xml (file) | | 21.13 MB | Ksherbina | 1 | |
| 06:09, 25 October 2013 | TallyEngine Results KS 20131024.jpg (file) |  | 39 KB | Ksherbina | 1 | |
| 06:06, 25 October 2013 | Use Tally Engine in GenMAPP Builder KS 20131024.jpg (file) |  | 65 KB | Ksherbina | 1 | |
| 06:04, 25 October 2013 | Using the Export Wizard in GenMAPP Builder Second Window KS 20131024.jpg (file) |  | 66 KB | Ksherbina | 1 | |
| 06:02, 25 October 2013 | Using the Export Wizard in GenMAPP Builder KS 20131024.jpg (file) |  | 89 KB | Ksherbina | 1 | |
| 05:59, 25 October 2013 | Using GenMAPP Builder KS 20131024.jpg (file) |  | 67 KB | Ksherbina | 1 | |
| 04:49, 23 October 2013 | Vc-Std KS 20131022.gdb (file) | | 25.48 MB | Ksherbina | (Updated database for V. cholerae created using GenMAPP Builder.) | 1 |
| 07:58, 18 October 2013 | Merrell Vibrio Data MAPPFinder Analysis Decreased KS 20131017-Criterion0-GO Filtered.xls (file) | | 427 KB | Ksherbina | 2 | |
| 07:18, 18 October 2013 | Merrell Compiled Raw Data Vibrio KS 20131010.gmf (file) | | 5.24 MB | Ksherbina | (MAPPFinder GO Mappings file) | 1 |
| 07:13, 18 October 2013 | Merrell Vibrio Data MAPPFinder Analysis Decreased KS 20131017-Criterion0-GO.txt (file) | | 150 KB | Ksherbina | (For the analysis, my Criterion0 ended up referring to the "Decreased" criterion rather than the "Increased" criterion.) | 1 |
| 07:07, 18 October 2013 | RNA processing KS 20131017.mapp (file) | | 180 KB | Ksherbina | 1 | |
| 06:29, 18 October 2013 | MAPPFinder Screenshots Top 10 Gene Ontology Terms KS 20131017.jpg (file) |  | 117 KB | Ksherbina | 1 | |
| 06:25, 18 October 2013 | MAPPFinder Screenshots GO Table KS 20131017.jpg (file) |  | 139 KB | Ksherbina | 1 | |
| 04:12, 18 October 2013 | GenMAPP Screenshot MAPPFinder Select Criterion to Calculate Results KS 20131017.jpg (file) |  | 82 KB | Ksherbina | 1 | |
| 04:08, 18 October 2013 | GenMAPP Screenshot Calculate New Results in MAPPFinder KS 20131017.jpg (file) |  | 186 KB | Ksherbina | 2 | |
| 04:08, 18 October 2013 | GenMAPP Screenshot Launch MAPPFinder KS 20131017.jpg (file) |  | 54 KB | Ksherbina | 2 | |
| 04:04, 18 October 2013 | Merrell Compiled Raw Data Vibrio KS 20131010.gex (file) | | 1.69 MB | Ksherbina | 2 | |
| 04:03, 18 October 2013 | GenMAPP Screenshot View Color Set on MAPP KS 20131017.jpg (file) |  | 51 KB | Ksherbina | 2 | |
| 03:26, 18 October 2013 | GenMAPP Screenshot Construct Criterion to Query Dataset KS 20131017.jpg (file) |  | 86 KB | Ksherbina | (Screenshot of how to construct a criterion to use to query a dataset (in GenMAPP).) | 1 |
| 00:25, 18 October 2013 | Merrell Compiled Raw Data Vibrio KS 20131010.EX.txt (file) | | 1.22 MB | Ksherbina | (Exceptions file generated when converting data to a GEX file in GenMAPP.) | 1 |
| 23:53, 17 October 2013 | GenMAPP Screenshot Load Expression Dataset Data Type Specification KS 20131017.jpg (file) |  | 165 KB | Ksherbina | (Screenshot of the window that pops up when opening an expression dataset in GenMAPP.) | 1 |
| 23:46, 17 October 2013 | GenMAPP Screenshot Load Expression Dataset KS 20131017.jpg (file) |  | 163 KB | Ksherbina | (Screenshot of loading an expression dataset in GenMAPP.) | 1 |
| 23:28, 17 October 2013 | GenMAPP Screenshot Load Gene Database KS 20131017.jpg (file) |  | 52 KB | Ksherbina | (Screenshot of loading gene database in GenMAPP.) | 1 |
| 17:04, 15 October 2013 | Merrell Compiled Raw Data Vibrio KS 20131010.txt (file) | | 1.16 MB | Ksherbina | 2 | |
| 17:37, 10 October 2013 | Merrell Compiled Raw Data Vibrio KS 20131010.xls (file) | | 9 MB | Ksherbina | (Changed the name of a sheet.) | 2 |
| 05:38, 10 October 2013 | Week8 Individual Assignment Problem 5.jpg (file) |  | 46 KB | Ksherbina | (Graph for problem 5 from Chapter 4 of Discovering Genomics, Proteomics, and Bioinformatics assigned for Week 8 individual journal assignment.) | 1 |
| 06:46, 4 October 2013 | GLeis Ksherbina Biological Databases Presentation 20131003.ppt (file) | | 2.68 MB | Ksherbina | (Presentation given by Gabriel Leis and Katrina Sherbina about the PrePPI Database on October 3, 2013 at LMU.) | 1 |
| 00:31, 30 August 2013 | Katrina Sherbina.jpg (file) |  | 178 KB | Ksherbina | (Picture of me with my poster at a symposium.) | 1 |
| 00:29, 30 August 2013 | Katrina Sherbina SMB 2012 Abstract.pdf (file) | | 15 KB | Ksherbina | (Abstract submitted for poster presented at Society for Mathematical Biology Annual Meeting 2012.) | 1 |
