Difference between revisions of "Kgosch Week 2"
From LMU BioDB 2013
(created page and added answers and links) |
(added my week 2 corrections) |
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:'''-2:''' N-Ter[ KVATAKVASGIHAKYWLRI ]C-Ter (Open Frame) | :'''-2:''' N-Ter[ KVATAKVASGIHAKYWLRI ]C-Ter (Open Frame) | ||
:'''-3:''' N-Ter[ KRRDGQGGVWYAGQV(M)ITH ]C-Ter (Open Frame) | :'''-3:''' N-Ter[ KRRDGQGGVWYAGQV(M)ITH ]C-Ter (Open Frame) | ||
| + | |||
| + | '''Corrections''' | ||
| + | |||
| + | The 3' to 5' reading frames should appear as follows: | ||
| + | :'''-1:''' N-Ter[ (STOP)NAASGTGGWVIRGTWY(STOP)HT ]C-Ter | ||
| + | :'''-2:''' N-Ter[ K(M)PPAELAAGLYAEHGISI ]C-Ter (Open Frame) | ||
| + | :'''-3:''' N-Ter[ KCRQRNWRLGYTRN(M)VLAY ]C-Ter (Open Frame) | ||
| + | |||
| + | It turns out that I did correctly separate each group of three in the 3' to 5' direction, however my mistake was not reading the three letters within each group in that direction as well. | ||
== Links == | == Links == | ||
Latest revision as of 00:22, 19 September 2013
Template:
5’-cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta-3’
Complement:
3'-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5'
Reading Frames
- +1: N-Ter[ R(M)LIPCSAYNPAASSAGGIL ]C-Ter (Open Frame)
- +2: N-Ter[ VC(STOP)YHVPRITQPPVPLAAF ]C-Ter
- +3: N-Ter[ YANT(M)FRV(STOP)PSRQFRWRHF ]C-Ter
- -1: N-Ter[ N(STOP)PPRRSRRGLIRRTGYDYA ]C-Ter
- -2: N-Ter[ KVATAKVASGIHAKYWLRI ]C-Ter (Open Frame)
- -3: N-Ter[ KRRDGQGGVWYAGQV(M)ITH ]C-Ter (Open Frame)
Corrections
The 3' to 5' reading frames should appear as follows:
- -1: N-Ter[ (STOP)NAASGTGGWVIRGTWY(STOP)HT ]C-Ter
- -2: N-Ter[ K(M)PPAELAAGLYAEHGISI ]C-Ter (Open Frame)
- -3: N-Ter[ KCRQRNWRLGYTRN(M)VLAY ]C-Ter (Open Frame)
It turns out that I did correctly separate each group of three in the 3' to 5' direction, however my mistake was not reading the three letters within each group in that direction as well.
