Difference between revisions of "Lena Week 8"
From LMU BioDB 2013
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*The processed data was saved here. [[Media:Merrell_Compiled_Raw_Data_Vibrio_AJV.gex]] | *The processed data was saved here. [[Media:Merrell_Compiled_Raw_Data_Vibrio_AJV.gex]] | ||
*The exception file was saved here. [[Media:Merrell_Compiled_Raw_Data_Vibrio_AJV.EX.txt]] | *The exception file was saved here. [[Media:Merrell_Compiled_Raw_Data_Vibrio_AJV.EX.txt]] | ||
| − | *There were 772 errors, the | + | *There were 772 errors due to genes not being found. |
| + | *I had more errors than my partner who was using the updated version, she has 122. I think the updated version probably had a more comprehensive list of genes for ''Vibrio cholerae''. | ||
| + | : | ||
| + | : | ||
Revision as of 18:03, 15 October 2013
Part 1
- Media: Merrell_Compiled_Raw_Data_Vibrio_LH_20091014.xls
- Media: Merrell_Compiled_Raw_Data_Vibrio_LH_20091014.txt
Part 2
- I used the 2009 version of the Vibrio cholerae Gene Database with GenMAPP.
- I loaded my txt file of Vibrio cholerae, and allowed Expression Dataset Manager to convert the data.
- The processed data was saved here. Media:Merrell_Compiled_Raw_Data_Vibrio_AJV.gex
- The exception file was saved here. Media:Merrell_Compiled_Raw_Data_Vibrio_AJV.EX.txt
- There were 772 errors due to genes not being found.
- I had more errors than my partner who was using the updated version, she has 122. I think the updated version probably had a more comprehensive list of genes for Vibrio cholerae.
