File list
This special page shows all uploaded files.
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| Date | Name | Thumbnail | Size | Description | Versions |
|---|---|---|---|---|---|
| 09:43, 6 September 2015 | BL Alt Contact Info.txt (file) |  |
70 B | other ways of contacting brandon litvak | 1 |
| 07:58, 7 September 2015 | Blitvak page picture.png (file) |  |
547 KB | picture for use on blitvak user page | 1 |
| 03:54, 22 September 2015 | ExPASy Translate Tool Results.txt (file) | |
326 B | wk 3 assignment | 1 |
| 22:11, 27 September 2015 | Bl output 1.png (file) |  |
9 KB | 1 | |
| 22:54, 27 September 2015 | Bl output 2.png (file) |  |
10 KB | output 2 for week 4 | 1 |
| 23:50, 27 September 2015 | Bl output 3.png (file) |  |
11 KB | output 3 for wk4 assignment | 1 |
| 02:45, 28 September 2015 | Bl output final.png (file) |  |
10 KB | final output, wk4 | 1 |
| 05:18, 15 October 2015 | BL TABLE1.png (file) |  |
2 KB | first table for week 6 assgnmnt | 1 |
| 05:18, 15 October 2015 | BL TABLE2.png (file) |  |
5 KB | second table for week 6 assgnmnt | 1 |
| 02:22, 18 October 2015 | GRAPH 1 BL WK7.png (file) |  |
13 KB | first graph for wk7 assignment | 1 |
| 03:19, 18 October 2015 | TABLE1 WK7 BL.png (file) |  |
13 KB | first table for week 7 assignment | 1 |
| 05:40, 20 October 2015 | Merrell Compiled Raw Data Vibrio BL 20151015.xls (file) |  |
9.97 MB | for part 1 of week 8 assignment | 1 |
| 05:41, 20 October 2015 | Merrell Compiled Raw Data Vibrio BL 20151015.txt (file) | |
671 KB | genmapp file for wk8 assignment | 1 |
| 21:39, 22 October 2015 | Merrell Compiled Raw Data Vibrio BL 20151020.gex (file) | |
1.31 MB | gex file from 10/22 for gemmapp | 1 |
| 22:52, 22 October 2015 | Outer membrane-bounded periplasmic space bl .mapp (file) | |
180 KB | added .mapp file | 1 |
| 18:57, 25 October 2015 | MAPPFINDER INFO BL.png (file) |  |
20 KB | top rows of CriterionGO in excel, MappFinder info | 1 |
| 05:30, 27 October 2015 | BIODATA Week 8 BL.zip (file) | |
1.61 MB | .zip of the files required for the week 8 assignment (pt II) | 1 |
| 22:04, 29 October 2015 | TallyEngine Results BL 20151029.png (file) |  |
27 KB | output of tallyengine, for the newly created database | 1 |
| 22:53, 31 October 2015 | Uniprot-organism BL 20151027.xml.gz (file) | |
2.54 MB | compressed UniProt XML for week 9 | 1 |
| 23:04, 31 October 2015 | BL 20151027 go daily-termdb.zip (file) | |
4.24 MB | zipped GO OBO-XML for week 9 , BL | 1 |
| 23:10, 31 October 2015 | 46.V cholerae ATCC 39315 BL 20151027.zip (file) | |
360 KB | compressed 46.V_cholerae_ATCC_39315_BL_20151027.goa | 1 |
| 23:16, 31 October 2015 | Vc-Std 20151027 BL.zip (file) | |
4.28 MB | compressed Vc-Std_20151027_BL.gdb | 1 |
| 03:33, 1 November 2015 | BL MATCHUTILITY WEEK9.png (file) |  |
13 KB | output of xmlpipedb match, for week9 | 1 |
| 03:36, 1 November 2015 | BL PSQL COUNT WEEK9.png (file) |  |
31 KB | using pgadmin iii to test the counts found using tallyengine week9 | 1 |
| 05:28, 3 November 2015 | Pgsql issuerow BL wk9.png (file) |  |
10 KB | screen shot of the problematic row (via pgAdmin III) week 9 | 1 |
| 07:10, 3 November 2015 | BL original row counts, 2010.png (file) |  |
31 KB | original row counts found using software for the 2010 model database | 1 |
| 07:12, 3 November 2015 | BL original row counts, 2015.png (file) |  |
33 KB | original row counts table from the 2015 database | 1 |
| 07:13, 3 November 2015 | TOP GO terms BL week 9.png (file) |  |
365 KB | TOP GO terms found using the new database | 1 |
| 07:31, 3 November 2015 | Match analysis BL week9.xlsx (file) | |
365 KB | excel file w/ the match analysis | 1 |
| 22:42, 12 November 2015 | Test search BL.png (file) |  |
5 KB | test search for possible MOD | 1 |
| 22:50, 12 November 2015 | BL testSearch 2.png (file) |  |
6 KB | second test search for the MOD | 1 |
| 23:04, 12 November 2015 | Final TestSearch BL.png (file) |  |
27 KB | last conducted search on the possible MOD | 1 |
| 02:35, 16 November 2015 | Sample search results MOD BL 11.15.png (file) |  |
174 KB | sample search conducted for week 11 | 1 |
| 08:02, 17 November 2015 | Genome Presentation - Anu and Brandon - Genialomics.pdf (file) |  |
1.76 MB | forgot to upload these earlier! oops | 1 |
| 11:31, 17 November 2015 | Genome Presentation - Anu and Brandon - Genialomics(FIXED).pdf (file) | |
1.76 MB | fixed a typo | 1 |
| 09:44, 21 November 2015 | 31277.B cepacia GEN BL12 20151119.zip (file) | |
402 KB | GOA file from the initial export/import Week 12 | 1 |
| 09:44, 21 November 2015 | Go daily-termdb GEN BL12 20151119.zip (file) | |
4.25 MB | OBO/XML file from the initial export/import Week 12 | 1 |
| 09:46, 21 November 2015 | Bc-Std GEN BL12 20151119.zip (file) | |
3.08 MB | gdb file from week 12 initial export/import | 1 |
| 09:46, 21 November 2015 | Uniprot-taxonomy-216591 GEN BL12 20151119.zip (file) | |
4.43 MB | xml file from week 12 initial export/import | 1 |
| 23:33, 21 November 2015 | TallyEngine Output Initial GEN BL12 20151119.png (file) |  |
9 KB | output of tallyengine for the initial export/import cycle | 1 |
| 00:09, 22 November 2015 | UniProt Data Table GEN BL12 20151119.png (file) |  |
43 KB | sample of the uniprot data for J2315, week 12 | 1 |
| 00:57, 22 November 2015 | TallyEngine Output Initial GEN BL12 20151119(1).png (file) | .png) |
9 KB | made an error with the old tallyengine output, week12 | 1 |
| 05:57, 22 November 2015 | Match Output GEN BL12 20151119.png (file) |  |
13 KB | match results for the first set of commands for the initial export, week 12 | 1 |
| 06:38, 22 November 2015 | PSQL GeneNameType Table GEN BL12 20151119.png (file) |  |
28 KB | PSQL table from the initial export testing, week 12 | 1 |
| 02:43, 24 November 2015 | OriginalRowCounts(initial export) GEN BL12 20151123.png (file) | _GEN_BL12_20151123.png) |
33 KB | original row counts for initial export of j2315 data | 1 |
| 03:25, 24 November 2015 | J2315MODGENES GEN BL12 20151123.png (file) |  |
30 KB | model organism database information regarding J2315 and its genes (annotated, CDSs, etc) Week 12 | 1 |
| 04:46, 24 November 2015 | Compressed Starting Files (source data).zip (file) | |
23.79 MB | Compressed initial files for the week 12 work | 1 |
| 04:49, 24 November 2015 | WEEK12FILES GEN BL.zip (file) | |
42.6 MB | Week 12 working files and products | 1 |
| 04:57, 24 November 2015 | ORIG GEN BL12.zip (file) | |
23.79 MB | compressed starting files for the week 12 assignment (in the correct file name format) | 1 |
| 20:40, 5 December 2015 | Bc-Std GEN 20151204.zip (file) | |
3.28 MB | Build 4 GenMAPP builder export of gdp | 1 |
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