Difference between revisions of "Team 2"
From LMU BioDB 2015
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== Deliverables == | == Deliverables == | ||
| − | GenMAPP Gene Database for assigned species (.gdb) | + | *GenMAPP Gene Database for assigned species (.gdb) |
| − | ReadMe file to accompany the Gene Database (.pdf) | + | *ReadMe file to accompany the Gene Database (.pdf) |
| − | Sample ReadMe in Word format: ReadMe_Vc-Std_External_20131122.zip | + | *Sample ReadMe in Word format: ReadMe_Vc-Std_External_20131122.zip |
| − | Include Gene Database Schema diagram in ReadMe | + | *Include Gene Database Schema diagram in ReadMe |
| − | Sample schema in Adobe Illustrator format: Vibrio_schema_20101022.zip | + | *Sample schema in Adobe Illustrator format: Vibrio_schema_20101022.zip |
| − | Gene Database Testing Report for final submitted Gene Database (print from wiki to .pdf file) | + | *Gene Database Testing Report for final submitted Gene Database (print from wiki to .pdf file) |
| − | Processed and analyzed DNA microarray dataset (.xls) | + | *Processed and analyzed DNA microarray dataset (.xls) |
| − | GenMAPP Expression Dataset file (.gex) | + | *GenMAPP Expression Dataset file (.gex) |
| − | Filtered MAPPFinder Results (.xls) | + | *Filtered MAPPFinder Results (.xls) |
| − | Sample MAPP file of a relevant biological pathway for your species (.mapp) | + | *Sample MAPP file of a relevant biological pathway for your species (.mapp) |
| − | Group Report describing the creation of the Gene Database and the biological analysis of the data (.doc or .pdf) | + | *Group Report describing the creation of the Gene Database and the biological analysis of the data (.doc or .pdf) |
| − | PowerPoint presentation (.ppt, given on Tuesday, December 15) | + | *PowerPoint presentation (.ppt, given on Tuesday, December 15) |
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Revision as of 23:35, 3 November 2015
Contents
The Class Whoopers Crew Page
- Species: Bordetella pertussis
Crew Members
- Coder: Nicole Anguiano
- Quality Assurance: Brandon Klein
- GenMAPP Users: Lena Olufson & Mahrad Saeedi
Annotated Bibliography
- Week 10 Creation of page and combined annotated bibliography (midnight 11/10)
Deliverables
- GenMAPP Gene Database for assigned species (.gdb)
- ReadMe file to accompany the Gene Database (.pdf)
- Sample ReadMe in Word format: ReadMe_Vc-Std_External_20131122.zip
- Include Gene Database Schema diagram in ReadMe
- Sample schema in Adobe Illustrator format: Vibrio_schema_20101022.zip
- Gene Database Testing Report for final submitted Gene Database (print from wiki to .pdf file)
- Processed and analyzed DNA microarray dataset (.xls)
- GenMAPP Expression Dataset file (.gex)
- Filtered MAPPFinder Results (.xls)
- Sample MAPP file of a relevant biological pathway for your species (.mapp)
- Group Report describing the creation of the Gene Database and the biological analysis of the data (.doc or .pdf)
- PowerPoint presentation (.ppt, given on Tuesday, December 15)
Links
GenMAPP Analysis of Bordetella pertussis Microarray Data
| Gene Database Project Links | |||||||
|---|---|---|---|---|---|---|---|
| Overview | Deliverables | Reference Format | Guilds | Project Manager | GenMAPP User | Quality Assurance | Coder |
| Teams | Heavy Metal HaterZ | The Class Whoopers | GÉNialOMICS | Oregon Trail Survivors | |||
Journal Entries
| Class Whoopers Individual Journal Entries | ||||
|---|---|---|---|---|
| Brandon Klein | Week 11 | Week 12 | Week 14 | Week 15 |
| Lena Olufson | Week 11 | Week 12 | Week 14 | Week 15 |
| Mahrad Saeedi | Week 11 | Week 12 | Week 14 | Week 15 |
| Team Entries | Week 11 | Week 12 | Week 14 | Week 15 |
Group Members
- Project Manager & Coder: Brandon Klein
- Quality Assurance: Mahrad Saeedi
- GenMAPP User: Lena Olufson
- Team Page
