Difference between revisions of "Talk:Bklein7 Week 14"

From LMU BioDB 2015
Jump to: navigation, search
(added new sql query block)
(added further code)
Line 7: Line 7:
 
     where dbreferencetype.type = 'EnsemblBacteria' and propertytype.type = 'gene ID'
 
     where dbreferencetype.type = 'EnsemblBacteria' and propertytype.type = 'gene ID'
 
     and propertytype.value ~ 'BP[0-9][0-9][0-9][0-9](A|B)' order by propertytype.value;
 
     and propertytype.value ~ 'BP[0-9][0-9][0-9][0-9](A|B)' order by propertytype.value;
 +
 +
# Bordetella pertussis
 +
bordetellapertussis_level_amount=1
 +
 +
bordetellapertussis_element_level0=uniprot/entry/gene/name&type&ORF
 +
 +
bordetellapertussis_query_level0=select count(*) from genenametype where type = 'ORF';
 +
 +
bordetellapertussis_table_name_level0=ORF
 +
 +
#
 +
# wizard.properties
 +
#

Revision as of 00:39, 14 December 2015

select propertytype.value from propertytype inner join dbreferencetype on
   (propertytype.dbreferencetype_property_hjid = dbreferencetype.hjid)
   where dbreferencetype.type = 'EnsemblBacteria' and propertytype.type = 'gene ID' order by propertytype.value;
select propertytype.value from propertytype inner join dbreferencetype on
   (propertytype.dbreferencetype_property_hjid = dbreferencetype.hjid)
   where dbreferencetype.type = 'EnsemblBacteria' and propertytype.type = 'gene ID'
   and propertytype.value ~ 'BP[0-9][0-9][0-9][0-9](A|B)' order by propertytype.value;
  1. Bordetella pertussis

bordetellapertussis_level_amount=1

bordetellapertussis_element_level0=uniprot/entry/gene/name&type&ORF

bordetellapertussis_query_level0=select count(*) from genenametype where type = 'ORF';

bordetellapertussis_table_name_level0=ORF

  1. wizard.properties