Difference between revisions of "Bordetella Pertussis GenMAPP Analysis Deliverables"

Revision as of 19:17, 18 December 2015

GenMAPP Gene Database for assigned species (.gdb): File:Bpertussis-std cw20151210.zip
ReadMe file to accompany the Gene Database (.pdf)
- Include Gene Database Schema diagram in ReadMe
Gene Database Testing Report for final submitted Gene Database (print from wiki to .pdf file)
Processed and analyzed DNA microarray dataset (.xls or .xlsx): File:Bpertussis compiledrawdata cw20151208.xlsx
Data file used for import into GenMAPP (.txt or .csv): File:Bpertussis compiledrawdata cw20151208.txt
GenMAPP Expression Dataset file (.gex): File:Bpertussis expressiondataset cw20151213.gex
Exceptions file of data imported into GenMAPP (.EX.txt): File:Bpertussis expressiondataset exceptions cw20151213.EX.txt
Raw MAPPFinder results files (-GO.txt):
- File:Bpertussis mappfinderresults cw20151213-criterion0-GO.txt
- File:Bpertussis mappfinderresults cw20151213-criterion1-GO.txt
.gmf file: File:Bpertussis compiledrawdata cw20151213.gmf
Filtered MAPPFinder Results (.xls or .xlsx):
- File:Bpertussis mappfinderresults filtered cw20151213-Criterion0-GO.xlsx
- File:Bpertussis mappfinderresults filtered cw20151213-Criterion1-GO.xlsx
Sample MAPP file of a relevant biological pathway for your species (.mapp): File:Bpertussis ribosomepathway cw20151215.mapp
Group Report describing the creation of the Gene Database and the biological analysis (.doc, .docx, or .pdf)
PowerPoint presentation: File:Bpertussis findings powerpoint.pdf

GenMAPP Analysis of Bordetella pertussis Microarray Data

Gene Database Project Links
Overview	Deliverables	Reference Format	Guilds	Project Manager	GenMAPP User	Quality Assurance	Coder
Overview	Deliverables	Reference Format	Teams	Heavy Metal HaterZ	The Class Whoopers	GÉNialOMICS	Oregon Trail Survivors

Class Whoopers Individual Journal Entries
Brandon Klein	Week 11	Week 12	Week 14	Week 15
Lena Olufson	Week 11	Week 12	Week 14	Week 15
Mahrad Saeedi	Week 11	Week 12	Week 14	Week 15
Team Entries	Week 11	Week 12	Week 14	Week 15

Week 10 Creation of page and combined annotated bibliography (midnight 11/10)
Week 11 (midnight 11/17)
Week 12 (midnight 11/24)
Week 14 (midnight 12/8)
Week 15 (midnight 12/15)

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	==Team Information & Links==		==Team Information & Links==
−	[[Template:Class Whoopers]]	+	{{Template:Class Whoopers}}