Difference between revisions of "Zvanysse Week 14"

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==Electronic Lab Notebook==
 
==Electronic Lab Notebook==
This week [[User:BHamilton18|Blair Hamilton]] and I worked on the Coder portion of our Interaction and Integration section for the final project.
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This week [[User:Bhamilton18|Blair Hamilton]] and I worked on the Coder portion of our Interaction and Integration section for the final project.
 
#In the beginning we held a group meeting to measure the progress of each member in the group.
 
#In the beginning we held a group meeting to measure the progress of each member in the group.
 
#We (Blair and I) also met with Dondi in order to work on syntax for our coding part of the assignment.
 
#We (Blair and I) also met with Dondi in order to work on syntax for our coding part of the assignment.
#We first wanted to have the user '''right''' click on any of the genes of the GRNsight page to open any page.
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#We first wanted to have the user '''right''' click on any of the genes from the genes on the GRNSight gene map interactive visualization page to open up into a new tab.
#*For our purposes we used this weskit to link to the page: [http://dogtime.com/dog-breeds/pug#/slide/1]
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#*Because we just needed a template, we used this weskit to link to the page: [http://dogtime.com/dog-breeds/pug#/slide/1] (Blair influenced this decision because of her love for Dogs)
#*It is important to note we did not care which website we were going to, we just wanted to link the right click to some website.
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#*Again, we just wanted a working template so we could start focusing in on the skeleton to stage our code to be able to easily input the other team's code.
#Next, we worked on creating a simple web page, similar to our gene pages, in which the site can link to instead of the outside website source.
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#We then wanted to create a simple web page similar to our gene page so the page could link to an internal link rather than an external one
#*One problem was that Safari and Chrome believe the websites are pop-ups and therefore blocks them. We were having some problems because some of the syntax changed, so Dondi worked his magic and created a fake anchor and made it invisible then linked the page so the right click button worked.
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#*One of the biggest challenges was that the browser denied requests to go to another page for potential security breach reasons. So, we asked Dondi and he created a fake anchor so that we could have a landing page, then put the URL on that landing page, then took the landing page away.
#*We have not fixed this problem yet but we have noted.
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#*The problem is not fixed in its entirety but it has been realized.
 
# href: "/gene/info.html?" + $.param({symbol: gene.name}),
 
# href: "/gene/info.html?" + $.param({symbol: gene.name}),
#* This code allows the right click to go to a generic page called info.html
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#* First, the "/gene/info.html?" part of the code allows the right click to go to a template page called info.html
#*Next the parameters goes to the gene selected and gives it's name.
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#*Next the parameters specifies the pathway to go to the gene that was selected by the user
#**I.e if "HOT1" is right clicked the new page will show a console.log of the gene name.
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#**Example:  if "BRO1" is right clicked from GRNSight, the new page will console.log the gene name.
#Finally we merged the other groups work for the first integration. All went smoothly and we will be collaborating more with groups soon.
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#Finally we merged the other groups work through GitHub for the first integration. All went well and we will be collaborating more with groups soon.  
  
 
==Acknowledgements==
 
==Acknowledgements==
#I worked with [[User:BHamilton18|Blair Hamilton]] to collaborate on the integration portion of our assignment. We meet in person as well as messaged each other with questions.
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#I worked with [[User:Bhamilton18|Blair Hamilton]] to collaborate on the integration portion of our assignment. We meet in person as well as messaged each other with questions.
 
#'''While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.'''
 
#'''While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.'''
  

Latest revision as of 19:06, 13 December 2017

Electronic Lab Notebook

This week Blair Hamilton and I worked on the Coder portion of our Interaction and Integration section for the final project.

  1. In the beginning we held a group meeting to measure the progress of each member in the group.
  2. We (Blair and I) also met with Dondi in order to work on syntax for our coding part of the assignment.
  3. We first wanted to have the user right click on any of the genes from the genes on the GRNSight gene map interactive visualization page to open up into a new tab.
    • Because we just needed a template, we used this weskit to link to the page: [1] (Blair influenced this decision because of her love for Dogs)
    • Again, we just wanted a working template so we could start focusing in on the skeleton to stage our code to be able to easily input the other team's code.
  4. We then wanted to create a simple web page similar to our gene page so the page could link to an internal link rather than an external one
    • One of the biggest challenges was that the browser denied requests to go to another page for potential security breach reasons. So, we asked Dondi and he created a fake anchor so that we could have a landing page, then put the URL on that landing page, then took the landing page away.
    • The problem is not fixed in its entirety but it has been realized.
  5. href: "/gene/info.html?" + $.param({symbol: gene.name}),
    • First, the "/gene/info.html?" part of the code allows the right click to go to a template page called info.html
    • Next the parameters specifies the pathway to go to the gene that was selected by the user
      • Example: if "BRO1" is right clicked from GRNSight, the new page will console.log the gene name.
  6. Finally we merged the other groups work through GitHub for the first integration. All went well and we will be collaborating more with groups soon.

Acknowledgements

  1. I worked with Blair Hamilton to collaborate on the integration portion of our assignment. We meet in person as well as messaged each other with questions.
  2. While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.

References

Zvanysse

BIOL/CMSI 367-01: Biological Databases Fall 2017

Assignments

Week 1 | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | Week 10 | Week 11 | Week 12 | Week 14

Individual Assignments

Zvanysse Week 1 | Zvanysse Week 2 | Zvanysse Week 3 | Zvanysse Week 4 | Zvanysse Week 5 | Zvanysse Week 6 | Zvanysse Week 7 | Zvanysse Week 8 | Zvanysse Week 9 | Zvanysse Week 10 | Zvanysse Week 11 | Zvanysse Week 12 | Zvanysse Week 14 | Zvanysse Week 15

Shared Journals

Zvanysse Week 1 Journal | Zvanysse Week 2 Journal | Zvanysse Week 3 Journal | Zvanysse Week 4 Journal | Zvanysse Week 5 Journal | Zvanysse Week 6 Journal | Zvanysse Week 7 Journal | Zvanysse Week 8 Journal | Zvanysse Week 9 Journal | Zvanysse Week 10 Journal | Zvanysse Week 11 Journal | Zvanysse Week 12 Journal | Zvanysse Week 14 Journal