Difference between revisions of "Dbashour Week 11"

From LMU BioDB 2017
Jump to: navigation, search
(Annotated Bibliography: syntax fix)
(inserted both articles used for final paper)
Line 3: Line 3:
  
 
#Murata et. al.(2006). Genome-wide expression analysis of yeast response during exposure to 4 C. Extremophiles, 10(2), 117-128.  
 
#Murata et. al.(2006). Genome-wide expression analysis of yeast response during exposure to 4 C. Extremophiles, 10(2), 117-128.  
#* http://sq4ya5rf2q.search.serialssolutions.com/?url_ver=Z39.88-2004&url_ctx_fmt=info:ofi/fmt:kev:mtx:ctx&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.atitle=Genome-wide%20expression%20analysis%20of%20yeast%20response%20during%20exposure%20to%204%20degrees%20C&rft.aufirst=Y&rft.aulast=Murata&rft.date=2006&rft.epage=128&rft.genre=article&rft.issn=1431-0651&rft.issue=2&rft.jtitle=EXTREMOPHILES&rft.pages=117-128&rft.spage=117&rft.stitle=EXTREMOPHILES&rft.volume=10&rfr_id=info:sid/www.isinet.com:WoK:WOS&rft.au=Homma%2C%20T&rft.au=Kitagawa%2C%20E&rft.au=Momose%2C%20Y&rft.au=Sato%2C%20MS&rft_id=info:pmid/16254683&rft_id=info:doi/10%2E1007%2Fs00792-005-0480-1 -----link to original article
+
#* Link to PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/16254683
#* https://apps.webofknowledge.com/full_record.do?product=WOS&search_mode=GeneralSearch&qid=4&SID=2CCfLt1ZSeZT5hBNIyR&page=1&doc=6&cacheurlFromRightClick=no -----link to web of science
+
#* Link to PubMed Central:  
#* https://scholar.google.com/scholar_lookup?doi=10%2E1007%2Fs00792-005-0480-1&issn=1431-0651&issue=2&journal=EXTREMOPHILES&hl=en&pages=117-128&pmid=16254683&title=Genome-wide%20expression%20analysis%20of%20yeast%20response%20during%20exposure%20to%204%20degrees%20C&author=Y%20Murata&publication_year=2006&volume=10 --------link to google scholar
+
#* Link to Publisher's full text: https://link.springer.com/article/10.1007/s00792-005-0480-1#citeas
#* https://s3.amazonaws.com/academia.edu.documents/46987997/s00792-005-0480-120160703-561-uj764b.pdf?AWSAccessKeyId=AKIAIWOWYYGZ2Y53UL3A&Expires=1510614207&Signature=rgFQic%2FhoIX6%2Fp5crBgtQs94ESU%3D&response-content-disposition=inline%3B%20filename%3DGenome-wide_expression_analysis_of_yeast.pdf -----link to PDF
+
#* Link to Publisher's PDF: https://link.springer.com/content/pdf/10.1007%2Fs00792-005-0480-1.pdf
# insert APA
+
#* Copyright: 2005 by Springer-Verlag
#* http://www.jbc.org/content/277/51/50015.long ----link to full text publisher
+
#* Organization of publisher: Springer-Verlag in Extremophiles
#* http://www.jbc.org/content/277/51/50015.full.pdf-----link to full text PDF publisher
+
#* Availability: Online and in print, LMU pays a subscription fee for this journal
#* https://www.ncbi.nlm.nih.gov/pubmed/12379644?dopt=Abstract -----pubmed abstract
+
 
 +
#Sahara, T., Goda, T., & Ohgiya, S. (2002). Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature. Journal of Biological Chemistry, 277(51), 50015-50021.
 +
#* Link to PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/12379644?dopt=Abstract
 +
#* Link to PubMed Central:
 +
#* Link to Publisher's full text: http://www.jbc.org/content/277/51/50015.long
 +
#* Link to Publisher's PDF: http://www.jbc.org/content/277/51/50015.full.pdf
 +
#* Copyright: 2002 by The Journal of Biological Chemistry
 +
#* Organization of publisher: American Society for Biochemistry and Molecular Biology
 +
#* Availability: Open Access on the day of acceptance, in print and online
 +
 
 +
==PubMed, Google Scholar, and Web of Science Analyses==
 +
 
 +
##** PubMed
 +
#*** What original keyword(s) did you use?  How many results did you get?
 +
#*** Which terms in which combinations were most useful to narrow down the search?  How many results did you get after narrowing the search?
 +
#** Google Scholar
 +
#*** What original keyword(s) did you use?  How many results did you get?
 +
#*** Which terms in which combinations were most useful to narrow down the search?  How many results did you get after narrowing the search?
 +
#** Web of Science
 +
#*** What original keyword(s) did you use?  How many results did you get?
 +
#*** Which terms in which combinations were most useful to narrow down the search?  How many results did you get after narrowing the search?
 +
#* Use the advanced search functions for each of these three databases/tools and answer the following: 
 +
#** PubMed
 +
#*** Which advanced search functions were most useful to narrow down the search?  How many results did you get?
 +
#** Google Scholar
 +
#*** Which advanced search functions were most useful to narrow down the search?  How many results did you get?
 +
#** Web of Science
 +
#*** Which advanced search functions were most useful to narrow down the search?  How many results did you get?
 +
 
 +
#** Perform a prospective search on the following three review articles in Web of Science and answer the following:
 +
#*** Aguilera, J., Randez-Gil, F., & Prieto, J.A. (2007).  Cold Response in Saccharomyces cerevisiae:  New Functions for Old Mechanisms.  FEMS Microbiological Reviews,  31, 327–341.  doi: 10.1111/j.1574-6976.2007.00066.x
 +
#**** How many articles does this article cite?
 +
#**** How many articles cite this article?
 +
#*** Al-Fageeh, M.B. & Smales, C.M. (2006). Control and Regulation of the Cellular Responses to Cold Shock:  the Responses in Yeast and Mammalian Systems. Biochemical Journal, 397, 247–259. doi:  10.1042/BJ20060166
 +
#**** How many articles does this article cite?
 +
#**** How many articles cite this article?
 +
#*** Thieringer, H.A., Jones, P.G.,& Inouye, M. (1998).  Cold shock and adaptation.  BioEssays, 20, 49–57.  doi: 10.1002/(SICI)1521-1878(199801)20:1<49::AID-BIES8>3.0.CO;2-N
 +
#**** How many articles does this article cite?
 +
#**** How many articles cite this article?

Revision as of 00:07, 14 November 2017

Annotated Bibliography

  1. Murata et. al.(2006). Genome-wide expression analysis of yeast response during exposure to 4 C. Extremophiles, 10(2), 117-128.
  1. Sahara, T., Goda, T., & Ohgiya, S. (2002). Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature. Journal of Biological Chemistry, 277(51), 50015-50021.

PubMed, Google Scholar, and Web of Science Analyses

        • PubMed
        • What original keyword(s) did you use? How many results did you get?
        • Which terms in which combinations were most useful to narrow down the search? How many results did you get after narrowing the search?
      • Google Scholar
        • What original keyword(s) did you use? How many results did you get?
        • Which terms in which combinations were most useful to narrow down the search? How many results did you get after narrowing the search?
      • Web of Science
        • What original keyword(s) did you use? How many results did you get?
        • Which terms in which combinations were most useful to narrow down the search? How many results did you get after narrowing the search?
    • Use the advanced search functions for each of these three databases/tools and answer the following:
      • PubMed
        • Which advanced search functions were most useful to narrow down the search? How many results did you get?
      • Google Scholar
        • Which advanced search functions were most useful to narrow down the search? How many results did you get?
      • Web of Science
        • Which advanced search functions were most useful to narrow down the search? How many results did you get?
      • Perform a prospective search on the following three review articles in Web of Science and answer the following:
        • Aguilera, J., Randez-Gil, F., & Prieto, J.A. (2007). Cold Response in Saccharomyces cerevisiae: New Functions for Old Mechanisms. FEMS Microbiological Reviews, 31, 327–341. doi: 10.1111/j.1574-6976.2007.00066.x
          • How many articles does this article cite?
          • How many articles cite this article?
        • Al-Fageeh, M.B. & Smales, C.M. (2006). Control and Regulation of the Cellular Responses to Cold Shock: the Responses in Yeast and Mammalian Systems. Biochemical Journal, 397, 247–259. doi: 10.1042/BJ20060166
          • How many articles does this article cite?
          • How many articles cite this article?
        • Thieringer, H.A., Jones, P.G.,& Inouye, M. (1998). Cold shock and adaptation. BioEssays, 20, 49–57. doi: 10.1002/(SICI)1521-1878(199801)20:1<49::AID-BIES8>3.0.CO;2-N
          • How many articles does this article cite?
          • How many articles cite this article?