Hhinsch Week 9
Contents
GRNsight Client Side Testing Document: Normalization + Zoom
- We used the following files for our tests:
21-genes_31-edges_Schade-data_estimation_output.xlsx
21-genes_31-edges_Schade-data_estimation_output.sif
21-genes_31-edges_Schade-data_estimation_output.graphml
| Test | Pass or Fail | Additional Explanation |
|---|---|---|
| Test 1 | Pass | There weren't any errors in completing this process. |
| Test 2 | Pass | There weren't any errors in completing this process. |
| Test 3 | Pass | There weren't any errors in completing this process. The graph showed up completely grey in the other two .graphml files.
|
| Test 4 | Pass | There weren't any errors. I used the edge weight factor of one and the lines became very thick. |
| Test 5 | Pass | I imported the .sif file and changed the weight factor from 1 to 2. It should be noted that the edge weight factor stays the same as when you determined it in the step before, even if you import a new graph.
|
| Test 6 | Pass | For this .graphml file it uploaded then I changed the edge weight factor to 0.001 and it worked. There isn't any way to set the normative factor for the other two .graphml files.
|
| Test 7 | Pass | The graph zoomed without a problem. |
| Test 8 | Pass | The graph zoomed without a problem. |
| Test 9 | Pass | The graph zoomed without a problem. |
| Test 10 | Pass | I set the normalization factor to 0.001. The graph zoomed without a problem.
|
| Test 11 | Pass | I set the normalization factor to 0.001. The graph zoomed without a problem.
|
| Test 12 | Pass | I set the normalization factor to 0.001. The graph zoomed without a problem.
|
| Test 13 | Pass | The graph zoomed out without a problem. |
| Test 14 | Pass | The graph zoomed out without a problem. |
| Test 15 | Pass | The graph zoomed out without a problem. |
| Test 16 | Pass | I set the normalization factor to 0.001 and it zoomed out without a problem.
|
| Test 17 | Pass | I set the normalization factor to 0.001 and it zoomed out without a problem.
|
| Test 18 | Pass | I set the normalization factor to 0.001 and it zoomed out without a problem.
|
Acknowledgments
- John Lopez, Dina Bashoura, Simon Wroblewski and I worked together in order to complete the deliverables of this assignment. John Lopez and I worked together more than once to complete the deiverables of this assignment.
- John David N. Dionisio helped explain the use of curl to complete the deliverables of this assignment.
- While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.
References
Assignments
Week 1
Week 2
Week 3
Week 4
Week 5
Week 6
Week 7
Week 8
Week 9
Week 10
Week 11
Week 12
Week 14
Week 15
Hayden's Individual Journal Entries
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Class Journal Entries
Class Journal Week 1
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Class Journal Week 10
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