Bhamilton18 Week 12

Electronic Notebook

For this week's assignment Zachary Van Ysseldyk and I worked on the Coder Milestones 0-4. Zach and I will be working on the integration of the website bringing together the other groups work to function on the GRNsight website. Katie and Emma worked on their respective journal club presentation, but we communicated to check base on how everyone is doing in the progression of the project.

Milestone 0

1. This portion of the assignment was completed in the Week 11 journal club presentation. The powerpoint can be found here:
   • Zach and Blair's Powerpoint

Milestone 1

1. This portion required our individual computers had the correct software to complete the project.
2. The following were already on my computer/downloaded to meet the requirements of this milestone:
   • Node.js 8.4.0
   • Code-savvy editor (Atom for my case)
   • Web browser with developer tools (Chrome for my case)
   • git version control software
   • curl command

Milestone 2

1. This portion required me to fork the open source GRNsight project.
   • This is found in the top right corner of the GRNsight GitHub project page.
2. I added each coder as a collaborator on the project to allow them to create individual branches for their own project milestones/work.
3. The fork is currently under my GitHub account: Bhamilton18.

Milestone 3

1. For this portion the following steps were needed to download the GRNsight GitHub code:
   • git clone the GitHub fork created and downloaded to Atom.
   • cd into the folder that contains the cloned repository
   • git checkout the branch that is assigned to you:
     • Interaction and Integration: master was our respective branch.
2. We followed the instructions in the GRNsight wiki to perform the following:
   1. Installation of necessary third-party libraries
   2. Initial startup of the GRNsight application on your computer

Milestone 4

1. This portion of the assignment was a bit slow due to our collaboration with other groups milestones. Once they complete their respective tasks, we will begin integrating them onto the GRNsight GitHub.
2. Instead,Zach and I explored the GRNsight code and worked on our team page based on the week 11 feedback from Dr. Dahlquist.

Acknowledgments

1. For this week's assignment I collaborated with my group members, Zachary Van Ysseldyk, Katie Wright and Emma Tyrnauer to complete individual portions of the final group project. We primarily communicated through text to clarify homework questions and update progress of the project.
2. While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.

References

LMU BioDB 2017. (2017). Week 12. Retrieved November 15, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_12

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