Bhamilton18 Week 15

Notebook for Week 15

1. This week Zach and I focused on major integration of the JASPAR, Gene Database APIs and Page Design teams.
2. Due to some communication issues of Week 14, Zach and I were backtracked on certain integrations with other groups, but quickly made up for lost time.
3. Our task for week was to add IDs from: NCBI, SGD, Ensembl, Uniprot and JASPAR to the top of the gene page.
4. By communicating with Dr. Dionisio we found the correct ID format to reference the info.html file as well as the api.js file.
   • The api.js file contains the data and info.html contains the page layout.
5. Each ID was created and required a few git pull commands as the other teams needed to fix api calls and retrieve the correct data.
6. Once this was completed, Zach and I worked with the page design team to find places for the data found throughout the api teams api.js file.

Acknowledgments

1. I worked with Zachary Van Ysseldyk to collaborate on the integration portion of our assignment. We meet in person as well as messaged each other with questions.
2. We collaborated with Dr. Dionisio on the id syntax and class referencing portions.
3. Interaction and Integration team worked with JASPAR, Gene Database APIs and Page Design teams throughout integrations.
4. While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.

References

LMU BioDB 2017. (2017). Deliverables. Retrieved November 14, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/GRNsight_Gene_Page_Project_Deliverables

LMU BioDB 2017. (2017). Week 15. Retrieved December 5, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_15

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