Difference between revisions of "Mavila9 Week 2"

From LMU BioDB 2019
Jump to navigation Jump to search
(invoke template)
 
(22 intermediate revisions by the same user not shown)
Line 1: Line 1:
 +
== Purpose ==
 +
This experiment served to clarify the relationship between dominant and recessive genes, while also furthering my understanding of the changes caused by mutation at a biochemical level using a computer model.
 +
 +
== Methods/Results ==
 +
# The program title Aipotu version 1.3.3 was downloaded.
 +
 +
# In order to decipher the color of the alleles present in the default Greenhouse the following crosses were performed:
 +
 +
<table>
 +
<tr>
 +
  <th>Organisms Crossed</th>
 +
  <th>Resulting Colors</th>
 +
  <th>Alleles Involved</th>
 +
</tr>
 +
<tr>
 +
  <td>Green-1 x Green-1</td>
 +
  <td>green</td>
 +
  <td>C<sup>g</sup></td>
 +
</tr>
 +
<tr>
 +
  <td>Green-1 x Green-2</td>
 +
  <td>green</td>
 +
  <td>C<sup>g</sup>, C<sup>x</sup></td>
 +
</tr>
 +
<tr>
 +
  <td>Green-1 x Red</td>
 +
  <td>green & black</td>
 +
  <td>C<sup>g</sup>, C<sup>r</sup>
 +
</tr>
 +
<tr>
 +
  <td>Green-1 x White</td>
 +
  <td>green</td>
 +
  <td>C<sup>g</sup>, C<sup>w</sup>
 +
</tr>
 +
<tr>
 +
  <td>Green-2 x Green-2</td>
 +
  <td>green, blue, & yellow</td>
 +
  <td>C<sup>b</sup>, C<sup>y</sup></td>
 +
</tr>
 +
<tr>
 +
  <td>Green-2 x Red</td>
 +
  <td>blue, yellow, orange, & purple</td>
 +
  <td>C<sup>b</sup>, C<sup>y</sup>, C<sup>r</sup>
 +
</tr>
 +
<tr>
 +
  <td>Green-2 x White</td>
 +
  <td>blue & yellow</td>
 +
  <td>C<sup>b</sup> & C<sup>y</sup><td>
 +
<tr>
 +
  <td>Red x White</td>
 +
  <td>red & white</td>
 +
  <td>C<sup>r</sup>, C<sup>w</sup></td>
 +
</tr>
 +
</table>
 +
 
=== How many different alleles are there? Which colors do they produce? ===
 
=== How many different alleles are there? Which colors do they produce? ===
  
Line 5: Line 60:
 
   <th>Alleles</th>
 
   <th>Alleles</th>
 
   <th>Color</th>
 
   <th>Color</th>
 +
</tr>
 
  <tr>
 
  <tr>
 
   <td>C<sup>w</sup>C<sup>w</sup></td>
 
   <td>C<sup>w</sup>C<sup>w</sup></td>
Line 29: Line 85:
 
=== Which are dominant and which are recessive? ===
 
=== Which are dominant and which are recessive? ===
 
Dominant- Blue, Red, Green
 
Dominant- Blue, Red, Green
 +
 
Recessive- Yellow, White
 
Recessive- Yellow, White
  
−
=== How do the colors combine to produce an overall color? For this, it may help to make a genotype-phenotype table and then try to abstract rules from that. You should be sure that you have tried all the possible combinations of the alleles you found in part (a). ===
+
=== How do the colors combine to produce an overall color? ===
  
 
<table>
 
<table>
Line 91: Line 148:
 
  </tr>
 
  </tr>
 
</table>
 
</table>
 +
 +
===Part 2===
 +
 +
====The starting color and the final color.====
 +
Starting color- Yellow
 +
Final color- Red
 +
 +
====The change(s) in the protein sequence.====
 +
[[File:Biochem.png]]
 +
 +
====The change(s) in the DNA sequence.====
 +
[[File:Molecular.png]]
 +
 +
====Organism file====
 +
[[File:Red from Yellow 3-1.zip]]
 +
 +
==Conclusion==
  
 
=== Using this knowledge, construct a purple flower. ===
 
=== Using this knowledge, construct a purple flower. ===
 +
Cross Green-2 and Red
  
 
=== Can you construct a pure-breeding purple flower with the starting set of organisms? ===
 
=== Can you construct a pure-breeding purple flower with the starting set of organisms? ===
 +
No because purple occurs due to red and blue co-dominance.
 +
 +
== Acknowledgements ==
 +
I would like to thank Emma Young and Google for helping me with this assignment.
 +
 +
== References ==
 +
 +
https://html.com/tables/ accessed September 11, 2019.
 +
 +
https://developer.mozilla.org/en-US/docs/Web/HTML/Element/sup accessed September 11,2019.
  
−
=== Post your findings to your section’s Lab Data Blog. ===
+
{{Mavila9}}

Latest revision as of 12:15, 17 September 2019

Purpose

This experiment served to clarify the relationship between dominant and recessive genes, while also furthering my understanding of the changes caused by mutation at a biochemical level using a computer model.

Methods/Results

  1. The program title Aipotu version 1.3.3 was downloaded.
  1. In order to decipher the color of the alleles present in the default Greenhouse the following crosses were performed:
Organisms Crossed Resulting Colors Alleles Involved
Green-1 x Green-1 green Cg
Green-1 x Green-2 green Cg, Cx
Green-1 x Red green & black Cg, Cr
Green-1 x White green Cg, Cw
Green-2 x Green-2 green, blue, & yellow Cb, Cy
Green-2 x Red blue, yellow, orange, & purple Cb, Cy, Cr
Green-2 x White blue & yellow Cb & Cy
Red x White red & white Cr, Cw

How many different alleles are there? Which colors do they produce?

Alleles Color
CwCw white
CyCy yellow
CgCg green
CbCb blue
CrCr red

Which are dominant and which are recessive?

Dominant- Blue, Red, Green

Recessive- Yellow, White

How do the colors combine to produce an overall color?

Genotype Phyenotype
CgCr black
CbCr purple
CyCr orange
CwCw white
CyCy yellow
CgCg green
CbCb blue
CrCr red

Using the symbols you have developed, give the genotypes of the four starting organisms.

Organism Genotype
Green-1 CgCg
Green-2 CgCr
Red CrCw
White CwCw

Part 2

The starting color and the final color.

Starting color- Yellow Final color- Red

The change(s) in the protein sequence.

Biochem.png

The change(s) in the DNA sequence.

Molecular.png

Organism file

File:Red from Yellow 3-1.zip

Conclusion

Using this knowledge, construct a purple flower.

Cross Green-2 and Red

Can you construct a pure-breeding purple flower with the starting set of organisms?

No because purple occurs due to red and blue co-dominance.

Acknowledgements

I would like to thank Emma Young and Google for helping me with this assignment.

References

https://html.com/tables/ accessed September 11, 2019.

https://developer.mozilla.org/en-US/docs/Web/HTML/Element/sup accessed September 11,2019.

Links

User Page

Template:mavila9

Assignment Page Individual Journal Entry Class Journal Entry
Week 1 Week 1 (User page) Shared Journal Week 1
Week 2 Mavila9 Week 2 Shared Journal Week 2
Week 3 Gene Page Week 3 Shared Journal Week 3
Week 4 Journal Entry Page Week 4 Shared Journal Week 4
Week 5 RNAct Database Page Week 5 Shared Journal Week 5
Week 6 Journal Entry Page Week 6 Shared Journal Week 6
Week 7 Journal Entry Page Week 7 Shared Journal Week 7
Week 8 Journal Entry Page Week 8 Shared Journal Week 8
Week 9 Journal Entry Page Week 9 Shared Journal Week 9
Week 10 Journal Entry Page Week 10 Shared Journal Week 10
Week 11 Sulfiknights Team Page Shared Journal Week 10
Journal Entry Page Week 11
Week 12/13 Journal Entry Page Week 12 Shared Journal Week 11
Week 12/13 Sulfiknights DA Week 12/13 Shared Journal Week 12
N/A Sulfiknights DA Week 14
Retrieved from "https://xmlpipedb2024.lmucs.io/biodb/fall2019/index.php?title=Mavila9_Week_2&oldid=2182"