Difference between revisions of "Ymesfin Week 8"
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| + | [[Media: HW_ymesfin_data_dHAP4.xlsx | dHAP4 Data Sheet]] | ||
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[[Media:Ymesfin_stem_data_dHAP4-DESKTOP-EAQMCRH.txt| dHAP4 stem data]] | [[Media:Ymesfin_stem_data_dHAP4-DESKTOP-EAQMCRH.txt| dHAP4 stem data]] | ||
Revision as of 00:16, 23 October 2019
Purpose
The purpose of this assignment was to create a detailed electronic lab notebook that analyzes a DNA microarray dataset and to demonstrate our understanding of p-value cut-offs.
Methods
- The data was first downloaded from the wiki
- The strain we will be analyzing is Delta-Hap4
- The data was obtained from the following file: Ymesfin_BIOL367_F19_microarray-data_dHAP4(7846).xlsx
- The file had timepoints at 15, 30, 60, 90, and 120 minutes. All the timepoints had 4 replicates but the 90 and 120 minute timepoints had 3 replicates. There were a total of 6189 samples in this dataset.
Results
Files
Acknowledgements
Dr. Kam Dahlquist; Professor
Naomi Tesfaiohannes; Homework Partner
David Ramirez; Homework Partner
Except for what is noted above, this individual journal entry was completed by me and not copied from another source.
Ymesfin (talk) 00:26, 16 October 2019 (PDT)
References
LMU BioDB 2019. (2019). Week 7. Retrieved October 16, 2019, from https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_7
LMU BioDB 2019. (2019). Week 8. Retrieved October 17, 2019, from https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_8
