Difference between revisions of "Mavila9 Week 12"

From LMU BioDB 2019
Jump to navigation Jump to search
(Annotated Bibliography: remove 1)
(Annotated Bibliography: questions)
Line 4: Line 4:
 
Parrish, A. R., Zheng, X. H., Turney, K. D., Younis, H. S., & Gandolfi, A. J. (1999). Enhanced transcription factor DNA binding and gene expression induced by arsenite or arsenate in renal slices. Toxicological sciences: an official journal of the Society of Toxicology, 50(1), 98-105. https://doi.org/10.1093/toxsci/50.1.98
 
Parrish, A. R., Zheng, X. H., Turney, K. D., Younis, H. S., & Gandolfi, A. J. (1999). Enhanced transcription factor DNA binding and gene expression induced by arsenite or arsenate in renal slices. Toxicological sciences: an official journal of the Society of Toxicology, 50(1), 98-105. https://doi.org/10.1093/toxsci/50.1.98
  
Tamás, M. J., Labarre, J., Toledano, M. B., & Wysocki, R. (2005). Mechanisms of toxic metal tolerance in yeast. In Molecular Biology of Metal Homeostasis and Detoxification (pp. 395-454). Springer, Berlin, Heidelberg. https://doi.org/10.1007/4735_105
+
# The link to the abstract from PubMed.
 +
#* https://www.ncbi.nlm.nih.gov/pubmed/10445758?report=abstract
 +
# The link to the full text of the article in PubMedCentral (if not available, write N/A).
 +
N/A
 +
# The link to the full text of the article (HTML format) from the publisher web site.
 +
#*
 +
# The link to the full PDF version of the article from the publisher web site.
 +
#* https://watermark.silverchair.com/500098.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAl8wggJbBgkqhkiG9w0BBwagggJMMIICSAIBADCCAkEGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8_pW__iD02HTM6m1AgEQgIICEiFWiVsdcTozKjN6UJplgjCe5_ZNofmm2vtpqhUw6YrmMV5l8Xg8H4wA5LGTzFOh5Dr0kRSNi5z2SCQ-QD5o1Y_itD1KdARt7RdUYThQWqVvQ12hLAnTvP1gcAN9FrffGv63ml5Jrc5G2MVIV6hLYH-L_aQMAFDW0Q-DY-2jAx1VjrmteH2IfjlIx-1mVPsX8a_qBOXON_z0xYBiX-qspMXUTIWrg6IBQJmKMP0LYwYq5LKYwYL8u_26ISQ87--_DrMOpsyH2TXxQv9aDkVdrx7geM9T40nviXIAONUzN8IG75f6TQTcYOQA9ZBElEpRfuX5mCes7KYirthp-lVYbFanmYBAhYtX7mkg2x9ApkfR1BQXYaf2uxYKqq6sUMfq6G32DahpBRwT0WFhGtXk1T6s8W9_NwjQCQ5SRKkJw1Pix1NwzCXNqZIPrWMp9mjZfVwvjI9HRo6cmLyvzH7JXpi0o3zPYkMNCN3NNJlRAM0CZWq9V50QbbF2yL6U3tRVXROQMS9TB_VEhSXqRLO5MCQ-TPBaaN-giQcRkAUSpZZIxjXLy7-qWCezHLqBL1MDLX4TL6tU82vtdD1Ow79RAhGd4VfR1b2rlhs5QZrsaqEKjD_Ws5c6RQ7vLTpdlKtSjy9QC-p2p7Ds0Wo4vXQZOhNQlSkHUzZ86iqK6lTb3e_-yJt857KgKkcsg8TPmXhU2PIv
 +
# Who owns the rights to the article? Look at the first page of the PDF version of the article for the © symbol.  Generally, either the journal/publisher or the authors will hold the copyright.
 +
 
 +
# How is the article available to you?
 +
#* Is the article available “Open Access” (look for the words “open access” or the “unlocked” icon on the article website or the first page of the PDF) If '''YES''', stop here.
 +
#* If the article is not Open Access, is it available for free after a certain period of time has elapsed?  You would not find the words “open access” or the “unlocked” icon, but you would still be able to access the article. If '''YES''', stop here.
 +
#* Did LMU buy a subscription or pay a fee for your access to this article?  You might see “Loyola Marymount University” or “LMU” on the article website.  Alternately, a list of the journals that LMU pays for can be found at: [http://sq4ya5rf2q.search.serialssolutions.com/ http://sq4ya5rf2q.search.serialssolutions.com/] If '''YES''', stop here.
 +
#* Is the article behind a paywall or “subscription-only”?  Your attempts to access it when on the LMU network have failed.  In this case, if you needed the article, you would use the ILLIAD system to request it by logging in here: [https://lmu.illiad.oclc.org/illiad/illiad.dll?Action=99 https://lmu.illiad.oclc.org/illiad/illiad.dll?Action=99]. ''Note that you don’t need to actually request it for this assignment''.
 +
# Is the article available online-only or both in print and online?  Look on the journal website for a “subscription” link.  If that page talks about subscribing to the print edition, then it is available in print.  If not, it is available online-only.
 +
# Who is the publisher of the journal? 
 +
#* Is the publisher for-profit or non-profit?
 +
#* Is the publisher a scientific society (some scientific societies partner with a for-profit publisher, some act as their own non-profit publisher)
 +
#* Does the publisher belong to the [http://oaspa.org/membership/members Open Access Publishers Association]?
 +
#* What country is the journal published in?
 +
# How Long has the journal been in operaion? (e.g., browse the archive for the earliest article published)
 +
# Are the articles in this journal peer-reviewed?
 +
# Provide a link to the scientific advisory board/editorial board of the journal.
 +
# What is the journal impact factor? (Look to see if it is provided on the journal home page.)
 +
# Is the article a review or primary research article?
 +
# Are the data associated with this article available?  If so, provide a link to the dataset.
 +
 
 +
2. Tang, L., Wang, W., Zhou, W., Cheng, K., Yang, Y., Liu, M., ... & Wang, W. (2015). Three-pathway combination for glutathione biosynthesis in Saccharomyces cerevisiae. Microbial cell factories, 14(1), 139. https://doi.org/139. 10.1186/s12934-015-0327-0

Revision as of 17:34, 15 November 2019

Links

User Page

Template:mavila9

Assignment Page Individual Journal Entry Class Journal Entry
Week 1 Week 1 (User page) Shared Journal Week 1
Week 2 Mavila9 Week 2 Shared Journal Week 2
Week 3 Gene Page Week 3 Shared Journal Week 3
Week 4 Journal Entry Page Week 4 Shared Journal Week 4
Week 5 RNAct Database Page Week 5 Shared Journal Week 5
Week 6 Journal Entry Page Week 6 Shared Journal Week 6
Week 7 Journal Entry Page Week 7 Shared Journal Week 7
Week 8 Journal Entry Page Week 8 Shared Journal Week 8
Week 9 Journal Entry Page Week 9 Shared Journal Week 9
Week 10 Journal Entry Page Week 10 Shared Journal Week 10
Week 11 Sulfiknights Team Page Shared Journal Week 10
Journal Entry Page Week 11
Week 12/13 Journal Entry Page Week 12 Shared Journal Week 11
Week 12/13 Sulfiknights DA Week 12/13 Shared Journal Week 12
N/A Sulfiknights DA Week 14

Annotated Bibliography

Parrish, A. R., Zheng, X. H., Turney, K. D., Younis, H. S., & Gandolfi, A. J. (1999). Enhanced transcription factor DNA binding and gene expression induced by arsenite or arsenate in renal slices. Toxicological sciences: an official journal of the Society of Toxicology, 50(1), 98-105. https://doi.org/10.1093/toxsci/50.1.98

  1. The link to the abstract from PubMed.
  2. The link to the full text of the article in PubMedCentral (if not available, write N/A).

N/A

  1. The link to the full text of the article (HTML format) from the publisher web site.
  2. The link to the full PDF version of the article from the publisher web site.
  3. Who owns the rights to the article? Look at the first page of the PDF version of the article for the © symbol. Generally, either the journal/publisher or the authors will hold the copyright.
  1. How is the article available to you?
    • Is the article available “Open Access” (look for the words “open access” or the “unlocked” icon on the article website or the first page of the PDF) If YES, stop here.
    • If the article is not Open Access, is it available for free after a certain period of time has elapsed? You would not find the words “open access” or the “unlocked” icon, but you would still be able to access the article. If YES, stop here.
    • Did LMU buy a subscription or pay a fee for your access to this article? You might see “Loyola Marymount University” or “LMU” on the article website. Alternately, a list of the journals that LMU pays for can be found at: http://sq4ya5rf2q.search.serialssolutions.com/ If YES, stop here.
    • Is the article behind a paywall or “subscription-only”? Your attempts to access it when on the LMU network have failed. In this case, if you needed the article, you would use the ILLIAD system to request it by logging in here: https://lmu.illiad.oclc.org/illiad/illiad.dll?Action=99. Note that you don’t need to actually request it for this assignment.
  2. Is the article available online-only or both in print and online? Look on the journal website for a “subscription” link. If that page talks about subscribing to the print edition, then it is available in print. If not, it is available online-only.
  3. Who is the publisher of the journal?
    • Is the publisher for-profit or non-profit?
    • Is the publisher a scientific society (some scientific societies partner with a for-profit publisher, some act as their own non-profit publisher)
    • Does the publisher belong to the Open Access Publishers Association?
    • What country is the journal published in?
  4. How Long has the journal been in operaion? (e.g., browse the archive for the earliest article published)
  5. Are the articles in this journal peer-reviewed?
  6. Provide a link to the scientific advisory board/editorial board of the journal.
  7. What is the journal impact factor? (Look to see if it is provided on the journal home page.)
  8. Is the article a review or primary research article?
  9. Are the data associated with this article available? If so, provide a link to the dataset.

2. Tang, L., Wang, W., Zhou, W., Cheng, K., Yang, Y., Liu, M., ... & Wang, W. (2015). Three-pathway combination for glutathione biosynthesis in Saccharomyces cerevisiae. Microbial cell factories, 14(1), 139. https://doi.org/139. 10.1186/s12934-015-0327-0