Difference between revisions of "User:Msamdars"

From LMU BioDB 2019
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(Related Courses)
(Experience)
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==Experience==
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==Research Experience==
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Undergraduate Research Assistant, LMU Bioinformatics and Biomathematics Group, Loyola Marymount University (September 2015 – Present)
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Advisors: Dr. Kam Dahlquist & Dr. John David Dionisio
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GRNSight: Web app and service for visualizing models of gene regulatory networks.
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https://dondi.github.io/GRNsight/
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* Currently the senior-most member of lab, in charge of supervising three other members and leading the major release initiative
 +
* Combined knowledge of genetics and biology with computer science to create innovative visualization tool for small-scale gene regulatory networks
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* Gained valuable experience working with Javascript, HTML5/CSS3, Python, Node.js, D3.js, Bootstrap, ReactJS, Jekyll, Mocha, Chai, GitHub, Linux, and Photoshop
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* Worked on refactoring codebase, implementing test-driven development practice, and adding new functions
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* Assisted with time-course experiments measuring yeast gene expression using DNA microarrays
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REU Participant, Redox Biology Center, University of Nebraska-Lincoln (June 2018 – August 2018)
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Advisors: Dr. Jiri Adamec & Ryan Grove
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Mathematical model of neuronal energy metabolism pathways affected in epilepsy.
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* Used common computational/mathematical biology tools to create a mathematical model of energy metabolism in neurons and astrocytes
 +
* Created and executed various wet lab experiments with C. elegans in order to validate the results of the mathematical model; used a thrashing assay to quantify and compare results between various trials with differing variables
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* Gained valuable experience working with MATLAB, COPASI, Cell Designer, and various MATLAB modeling packages like Recon 3D.

Revision as of 13:57, 30 August 2019

Mihir Samdarshi

This page is under construction.

Contact Information

Snail Mail:

1 LMU Drive, MSB-5848
Los Angeles, CA 90045

email:

msamdars(at)lion.lmu(dot)edu

Education

Loyola Marymount University

Location: Los Angeles, CA

Degree: Bachelor's of Science

Major: Biology

Minor: Computer Science

Anticipated Graduation: December, 2019


Related Courses

Biology Computer Science
  • Molecular Biology of the Genome ¹
  • General Microbiology ¹
  • Urban Ecology ¹
  • Plant Biotechnology
  • General Physiology
  • Epidemiology
  • Genetics Laboratory ¹


¹ signifies that the course was a lab course or taken concurrently with a lab version of the course

  • Computer Programming
  • Programming Lab
  • Data Structures
  • Algorithms
  • Interaction Design
  • Programming Languages

Research Experience

Undergraduate Research Assistant, LMU Bioinformatics and Biomathematics Group, Loyola Marymount University (September 2015 – Present) Advisors: Dr. Kam Dahlquist & Dr. John David Dionisio

GRNSight: Web app and service for visualizing models of gene regulatory networks. https://dondi.github.io/GRNsight/

  • Currently the senior-most member of lab, in charge of supervising three other members and leading the major release initiative
  • Combined knowledge of genetics and biology with computer science to create innovative visualization tool for small-scale gene regulatory networks
  • Gained valuable experience working with Javascript, HTML5/CSS3, Python, Node.js, D3.js, Bootstrap, ReactJS, Jekyll, Mocha, Chai, GitHub, Linux, and Photoshop
  • Worked on refactoring codebase, implementing test-driven development practice, and adding new functions
  • Assisted with time-course experiments measuring yeast gene expression using DNA microarrays

REU Participant, Redox Biology Center, University of Nebraska-Lincoln (June 2018 – August 2018) Advisors: Dr. Jiri Adamec & Ryan Grove

Mathematical model of neuronal energy metabolism pathways affected in epilepsy.

  • Used common computational/mathematical biology tools to create a mathematical model of energy metabolism in neurons and astrocytes
  • Created and executed various wet lab experiments with C. elegans in order to validate the results of the mathematical model; used a thrashing assay to quantify and compare results between various trials with differing variables
  • Gained valuable experience working with MATLAB, COPASI, Cell Designer, and various MATLAB modeling packages like Recon 3D.